Mya arenaria (softshell): 128230365
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Entry
128230365 CDS
T09995
Name
(RefSeq) tetratricopeptide repeat protein 37-like isoform X1
KO
K12600
superkiller protein 3
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128230365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128230365
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
128230365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_16
TPR_11
TPR_19
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_12
ANAPC3
TPR_15
TPR_7
RPN7
TPR_MalT
ARM_TT21_5th
NatA_aux_su
SNAP
ARM_TT21_2nd
FAT
TPR_3
Motif
Other DBs
NCBI-GeneID:
128230365
NCBI-ProteinID:
XP_052798531
LinkDB
All DBs
Position
4:3262312..3307021
Genome browser
AA seq
1337 aa
AA seq
DB search
MDCNENLCVGSLCEELARDCILGGDCLYLMDAKEVKSALKKAREAIRQKEYNEALGVCKD
IIASDGSNYMAFVLTAVAAEGLSQNDQALGAYRRAVQIDDTQILAWQGLGTFYEKNSIPA
YASDQCDVYLKLIEFNKGQEDKIYELTVKLVKLTEYVNDPAKIQKILKLSGEYLASHPMY
SDEVETVLTFFFSQTLQRDGDSIFKLAQTYLQVYPGSSVVLKHSILGCLDNMIVDETVAT
RLPDLVSRYEAVLGGCNCDVMTVAKAAIAFTRKDCTSVRKILQQLSSSGGQLVCVVCLQA
KMEFELHQYISAIRTCKTAMDLVNRKDAILTQPCGSIRQVINVLTVRSLTQIGDTASLNR
ALGIIEKDLEHSESTQLMKGQICFKLGDLQTARSCLIGNSTEKQDLEGQIFFAEKDFKAA
KQMFESLLEQETDNSSHLVNLAKCLWETGEDNQQCFTLLLKAAKLDPNNSMTFLYLGHYY
IQVGKDKLRARKCYQKAFDLDPSCSEAGEPLCDFLTEQGEEDQVHPILVKFTSMAPPGSG
KWAWLRLGLWQMKHGDPSVAIASLQSALRADSKDTHVWECLGEAYLLRGSYTASLKAFTR
AAELNPASIYCLFQIASIKQTLGQYQEALVEYKMILDQSDDYVPALKGLGETLVQIGRSL
LNQCFYGRARDTAELAVKHLYRAGRLRPDVSCLWKLIGDACTIIHVLPEKGFRFERPEKG
NMTKLETLEFGNICYIRALKILPDCSSLWHDLGVNYIHQSDSSSGDTAISLAEKSVQSLK
KAIQLEPTNHKHWNALGFVACRKVYNKSSLAQHCFIKSIKVEANNVVAWTNLAALYLKKE
NVKLAHEAFKVAQSLEPSYVACWVGQAIIAEVVGHEDAMDLFRHTTELSHHVEGAIGYGQ
WVCSVLLQSDKKGTSMYMYAIEEMGAVPSASDALARYTECNQTNPVAYNLHALLLERQGL
YKTAITQLNRALLLCESGQENAEILKDVLANCARCYRKNGDYPMACQLYKKLGEQSRVED
LYQFGLALYQGGDCKGAIQVYSQAAELATTDKEKSHILVTMAMVYYKMNDLNQTKTILFQ
SSQSSEASPAGLKALCALGLLQSDITLATAAVQELSKLGGENSHLYDFTLLQCILNLAQD
ETDTALALVQASLEDSTTQGDCWYLLTLLLLMFYPSKSGIATQAARNVLLHGHTVHNKKE
QLLVPVADIKHGYHGNKTSCRNAFLSAQRAVHLYPDKKEGWLTLTSAVGVEAASAMDDER
RRSLMTFRYNMLVNVAQLDLDPVFCLWCLQQRVACAALAGLHKEVMDDLDKLMTDYGEEK
EATDFFNLMRKYLAENP
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaatgagaatttgtgtgtaggtagcttatgtgaagagctagctagggattgc
attttgggaggtgattgcttgtacctgatggatgcaaaagaggtgaaatcggctttaaag
aaggcaagggaggcaattcgacagaaagaatacaatgaggctctgggagtttgcaaggac
atcattgcctctgatggatctaactacatggcctttgtgttgactgctgtagccgcggag
gggctttctcaaaacgaccaggctcttggcgcatacagaagagcagtgcagatagatgat
acacagattctagcctggcagggcttgggcacattttatgaaaagaactccatcccagcc
tatgcctcagaccaatgtgatgtctacttaaagctcattgagttcaataaaggacaagag
gacaagatatatgagctgacagtgaagcttgttaaactgacggaatacgtgaatgatccc
gccaagatacaaaagatcctaaaactatctggagagtatcttgctagccatcctatgtac
agtgatgaagtcgagaccgttctaacattcttcttctcacagactctccagagggatggt
gatagcatcttcaaactggcccagacttatcttcaagtttacccaggatcctcggttgtc
ctcaaacattccattctaggttgccttgacaacatgatagttgatgagacagtagccact
agactcccagacctggtatcgaggtatgaagctgtgctgggtggctgtaactgtgatgtg
atgacagttgcaaaggcggccatagcttttacgaggaaggattgtacttcagtgcggaaa
attctccaacaattgtcgagttctggtggtcagctggtttgtgttgtgtgtcttcaagcc
aaaatggaatttgaacttcaccagtatatttctgctatcagaacttgcaaaacagccatg
gaccttgtcaacagaaaggacgcaattctcactcagccgtgtggtagcatacgtcaggtc
atcaatgttctaactgtgcgatctctaacacaaataggcgacactgcctcacttaacagg
gctttgggcatcatagaaaaggatctagagcacagtgagtccacacaactcatgaaaggg
cagatatgcttcaaactgggtgatctacaaactgcaaggtcatgtttaattggaaactcc
acagaaaagcaagaccttgagggtcagatattctttgcagaaaaggacttcaaagcagca
aaacagatgtttgagagtttgttggaacaggagacagataactcctcgcaccttgtgaac
cttgccaagtgtctgtgggagacaggggaagataaccagcagtgtttcacccttctgctg
aaggctgcaaaactggaccccaacaacagcatgacctttctgtatctaggtcattactac
attcaagttgggaaggacaaattaagggctcgcaagtgttaccagaaggcatttgacctt
gaccccagctgtagtgaagcaggggaaccactgtgtgactttcttactgaacaaggagaa
gaggaccaggtccacccgatccttgtcaagttcacgagcatggctccacctggaagcggc
aagtgggcgtggctaagattgggcctgtggcagatgaagcatggcgacccgtctgttgcc
atagcatcactgcagtctgctctcagggctgattctaaagacactcatgtatgggaatgt
ctaggggaggcttacctgttacgtggcagctacacagcgtctctgaaggcctttactcgg
gcagccgaactcaacccagcctccatatactgtctcttccagatagcctcaatcaagcag
accctgggacagtaccaagaggccctggtggagtacaagatgatcctggaccagtctgat
gactatgtacctgcactgaaagggctgggtgagacattggtgcagatagggcgttcctta
ctcaaccagtgtttctatggtcgtgccagggacactgcagaactggccgttaaacatctg
tacagggctggcagactgaggcctgatgtgtcctgcctgtggaagctgattggggacgct
tgtacaatcatacatgtcctgccagaaaagggcttcaggtttgagagaccagaaaagggc
aatatgaccaagttggagactctagagtttggaaatatttgctacattcgggctttgaaa
attctcccagactgttcttcactctggcatgatctgggtgtgaattacatccaccaatca
gatagtagctctggtgatactgcaatttcattggctgaaaagtctgtccaatcgctgaag
aaagccattcaactggaaccgaccaatcacaagcattggaatgctctaggatttgtggcc
tgtaggaaagtgtacaacaagtcttccctggcgcaacactgcttcatcaaatctatcaag
gttgaggctaataatgtcgttgcatggaccaatctggcagctttgtatcttaagaaggaa
aatgtcaagctagctcatgaggctttcaaagtggcccagagccttgaaccatcgtatgtg
gcctgctgggtggggcaggctattatagctgaggttgttggacacgaggatgctatggat
ctctttagacacaccacagaactctcccaccatgttgagggagctataggctatggccag
tgggtgtgttctgttctgctacagtcagataaaaaggggactagtatgtacatgtatgcc
attgaagaaatgggagctgtaccttcggcttccgatgctctggctagatatactgagtgt
aatcagacaaacccagtggcctacaacctccacgctctactgttggagagacagggcctg
tataaaactgccatcacacagcttaatagagcgctgttgctgtgcgagtccggccaggag
aatgctgagatactgaaggacgtgctggccaactgcgctcgctgttataggaagaatggt
gactatcccatggcctgtcaactatacaaaaagctaggagaacagtcaagggtagaggac
ctgtaccagtttggcctagccctgtaccagggtggggactgcaaaggagccattcaggtg
tacagccaggcagctgagctagcaacaactgacaaagagaagtcacatattctggtaacc
atggcaatggtgtactacaagatgaatgaccttaatcagactaaaacaatactttttcaa
agttctcagagttctgaagcatctcctgctggtctgaaggccctctgtgcccttggtctg
ctccagtccgacatcaccttggcaactgctgctgtacaggagctctccaaactgggaggg
gagaatagtcacctgtatgacttcactctgctgcaatgcattttgaatcttgctcaggac
gagacagacacagcattggctctggtccaagctagcctggaagacagcaccacacaaggt
gactgctggtatcttctgacacttctactgctcatgttttaccccagtaaatcaggcatt
gcaacccaggctgctagaaacgttctacttcatggacacacggtgcataataagaaagag
cagttgctagtgccagttgctgacatcaaacatggttaccatggcaataagaccagctgt
agaaacgccttcctcagtgcacagagggctgtacatctttaccctgacaagaaggaaggc
tggttgactcttacctcggccgtcggtgttgaagcggccagtgcaatggatgatgagagg
cgaagatccctgatgacattccggtacaacatgctggtcaacgtggctcaactagaccta
gatcctgtgttttgtctctggtgtttacaacagagggtggcatgtgctgccttggcgggt
ctacacaaggaagtcatggacgacctggataagttgatgaccgactatggagaggagaag
gaagccacagacttcttcaaccttatgaggaaatatctagcagaaaacccatga
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integrated database retrieval system
