Mya arenaria (softshell): 128234139
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Entry
128234139 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K10159
toll-like receptor 2
Organism
maea
Mya arenaria (softshell)
Pathway
maea04145
Phagosome
maea04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128234139
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128234139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128234139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128234139
04054 Pattern recognition receptors [BR:
maea04054
]
128234139
04090 CD molecules [BR:
maea04090
]
128234139
00536 Glycosaminoglycan binding proteins [BR:
maea00536
]
128234139
Membrane trafficking [BR:
maea04131
]
Endocytosis
Phagocytosis
Toll-like receptors
128234139
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of breast milk
128234139
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128234139
CD molecules [BR:
maea04090
]
Proteins
128234139
Glycosaminoglycan binding proteins [BR:
maea00536
]
Hyaluronan
Cell surface receptors
128234139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
128234139
NCBI-ProteinID:
XP_052804138
LinkDB
All DBs
Position
5:complement(33833376..33836522)
Genome browser
AA seq
874 aa
AA seq
DB search
MELDTFLVVFALLIALPNLSMCCYKCGPDLKCSCTDILPGMIAMDCKGRKVNIRQVCETI
ARIYSNVSDLNIARNNIGNFNVEDLNHCRNISSLNMNYNQISSLPNGVFKDFQNILTLDL
SDNMLDIYNKTAFNPNVLPSTLTILKLFGNFREDSKLGKNFAYPDFTYLRYIGLLQMDGV
DTAFGPQYKNSGVRNLTLSSKGPLGFCSIKDIFPTTFHSLENVRVLDVSSCRIENIYRDA
FKNMKSLEILDLSLNRRLGFSSLMNISYSLQFTNIQFLNYSRVYTSFGTGTILLNRDLCY
LRNTSLKAMAIDGNKIQMIEKNTNLLLPKQFETMYAQENKFSFGLYLIQLACLQNMLHIH
ANNQNKMHSPITYLAEPIPKDDNDRSRDSECPFMTEESLKSIAKYIPHCTYFPKNETVTD
MKPRFPKLLKSIYFSGCNMAYSLDNTQINIKPSNNSLEVLDFSRNAYHSLSGKIGPFPNL
KFFTISRSYCSFISSDILSMENLENLQLDQNYLGGMFAQQEEADTFEYLTHLKTLNLSTN
RITVLQKNIFSHLENVEEIDLSCNNIEMFDVDVKTLNNLLHLNLRGNAVHKLNHVVRQLL
EDNSERIGKNFTLDLRNNSIEYSCTNQKFLYWLLDHKERLRGFYEMVFFRLNGSSVDANA
FLRDVPHLRAQCRSYTVAIVLSALGVLSACVIIIGVISYKKRWKLRYWYYMTKQNYFGYR
RLVNDYNAENYRYDAFISYSDHDLHFIRGEIIPRLEDRGMKLCVHQRDFLPGIPIQDNIV
DAIRTSKKTVVILSKTFVMKQWCIFEFNMARMESIDKRVSENGCLVIVLYENVPAKIMPL
EILDWIDNHSYISYTSDPDGQPLFWENMTTAIKR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggaactggatacttttctggttgtttttgctttgctaattgcgctcccaaatctctcg
atgtgttgctataaatgtggtcccgacttgaaatgttcttgcacggatattttaccggga
atgattgccatggactgtaaaggaagaaaagtaaacattcgtcaggtttgtgaaactatt
gcgcgaatatactcaaatgtgtcggatcttaacattgcacgaaataacattggtaacttt
aatgtcgaagacttgaaccactgtcgaaacatcagtagtttgaacatgaattacaaccag
atatcgtctttgccaaatggtgtctttaaagattttcagaacatattgacactagatttg
agcgataacatgctggacatttacaataaaacggcgtttaacccaaatgtgcttccatcg
actctgacaatcctcaaactctttggcaactttcgagaggatagcaagcttggaaaaaac
ttcgcatatccagattttacttatctgcggtacatcggattgttgcagatggacggggtt
gatacagctttcggtcctcagtataaaaacagtggcgtcagaaatttaactctttcatca
aaaggacctttgggattctgttccataaaggacatctttccgaccactttccactcgctt
gagaatgtacgtgtccttgatgtatcctcgtgtagaattgaaaatatttacagagatgcc
ttcaaaaacatgaagagtcttgaaattttggatctttctttgaacagacgtctaggattt
agctccctgatgaatatttcatattcgctccagtttacaaatatccaatttctgaattac
tcgcgggtttatacttcatttggcactgggactattcttttaaatagagatttgtgttac
ttacggaatacttctctgaaagcaatggccattgatggtaacaagattcaaatgatagaa
aagaacacgaatttgctacttccgaagcaatttgaaacaatgtatgcgcaagagaataaa
ttctcttttgggttatatctcattcagttggcttgtcttcaaaatatgttacatattcat
gcaaataaccaaaacaagatgcattcacctattacataccttgccgaacctataccaaaa
gatgacaacgatcgaagcagggattcggaatgcccattcatgacggaagaaagtttgaag
tccattgcgaaatatattccccattgtacgtacttcccaaaaaatgaaaccgttactgac
atgaaaccacgttttcccaaattactcaaaagcatttatttctctggctgcaacatggca
tacagccttgacaatacgcaaatcaatataaaaccttcaaataactcgcttgaagtattg
gatttttcaagaaacgcttatcattccttgagcggcaagataggtccatttccaaatctt
aagttttttacaatctcccgttcttactgttcattcataagttcagacattttgtcaatg
gaaaatcttgaaaaccttcagcttgatcaaaattatttgggaggaatgtttgcacagcaa
gaagaagcagacacgtttgaatatctaacacatttgaaaacgctaaatctttccacaaac
cgcataacagtcctccaaaagaatatctttagtcatctcgaaaatgtcgaagaaattgat
ttaagctgtaacaatatcgaaatgtttgacgtcgatgtaaagactttgaacaatctgctt
catttgaatcttcgaggtaacgctgttcataaactgaaccatgtagtaagacaacttctc
gaagataattcagagcgaataggaaagaattttactttggacttgaggaacaattcaatc
gaatacagttgtaccaatcaaaagtttttgtactggttgcttgatcataaagaaaggtta
cgaggtttttatgagatggttttctttaggttaaatggaagctctgtagatgcaaatgca
tttctgcgcgatgtgccccacttgcgtgcacaatgtagatcatatacagttgcgattgta
ttgtccgctttgggtgtattgtcagcatgtgtaatcatcattggagtcatttcgtacaaa
aagagatggaaacttcggtattggtactacatgacaaagcaaaattactttggctaccgg
cgactagtgaacgactataatgctgaaaattaccgatacgatgcgtttatatcttattca
gatcatgacttacattttattcgaggcgaaattataccaagactagaggacagagggatg
aagctgtgtgtacaccaacgcgacttcctacctggtataccgatacaggataacatagtg
gatgcgatacgaacaagcaagaaaacggtagtgattctctcaaaaacctttgtaatgaaa
caatggtgcatttttgaattcaacatggcaagaatggaaagcattgacaagcgtgtgagc
gagaatgggtgtttagtgattgtactgtacgagaatgttcccgccaaaataatgcctctc
gaaattcttgactggatagacaatcattcgtacatttcctatacaagcgacccggacggc
cagccattgttttgggaaaatatgacaacagccataaagcgttga
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