Mya arenaria (softshell): 128234281
Help
Entry
128234281 CDS
T09995
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
maea
Mya arenaria (softshell)
Pathway
maea04145
Phagosome
maea04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128234281
09142 Cell motility
04814 Motor proteins
128234281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128234281
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
maea04812
]
128234281
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
128234281
Cytoskeleton proteins [BR:
maea04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
128234281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Dynein_IC2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
128234281
NCBI-ProteinID:
XP_052804391
LinkDB
All DBs
Position
5:complement(28193304..28222064)
Genome browser
AA seq
657 aa
AA seq
DB search
MSDRKAELERKKQRLEMMRKERAEKERRKMTHQPEADTKAKPNTTVQSADDLLKDLGIPL
ADSGERAGSDKGSDSTEGSKEPTPHPTPTKVRAKTVKLAVARVSETNIPPRENVTYSKET
QTQGLEPIDRDGHGLYRHLKGPWDYYVLTFDDDRRTDDDQEPDTDSGEISLGAGQHKMPH
VEMVAPAHTHEDETPAGHIFSQVPRKWSFHQGTALTGAPKVKEMSEDEKNSILVSEDFRY
FIDHTSRVIERALDEVAVDFDYSRTGDDDLANQNLAGERLKLNREFFDERWSKHRIVTSM
DWSTQFPELLVASYSANEDAPHDPDGVALIWNSRFKKSTPEYVFHCQSAVMSTCFAKFHP
NLVVGGTYSGQIVLWDNRVLKRTPIQRTPLSASAHTHPVYCVNVVGTQNAHNLISVSTDG
KMCSWSLDMLSQPQDCMELQYTQTKAVNVTSFSFMSGDVNNFVVGSEDCTVYTACRHGSK
AGISESFEGHQGPITGIDCHKVAGQIDFSPYFLTSSFDWTIKLWSIKDRKFIHSFEDNSD
YVYDVQWSPIHPAVFASVDGMGRLDLWNLNQDTEVPSASNVLDTGAALNHLRWHQNGHMI
AAADDMGHIYLHDVAESFANPKSDEWSRFVHTLQELKQHAAEREEDTALSGIGSPMR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagaaaggcagagttggagcggaagaaacagaggcttgagatgatgcggaag
gagagggcggagaaggaaaggagaaaaatgacacatcagccagaagcagatacaaaagca
aaacctaacacgactgttcagtctgctgacgacttattgaaagatcttggaattccacta
gcagacagtggagaaagagctggctcagataagggaagtgactctaccgagggaagcaag
gaaccaactccccaccccacaccaacaaaagttagggcaaagacagtgaaacttgcagtt
gcccgtgtgtctgagaccaacatcccaccaagagaaaatgtcacatactccaaagagacc
cagacccagggcttggagcccattgatcgagatggacatggtctttatcgacatctgaaa
ggaccatgggactactacgttcttacttttgacgatgatcggcgaacagatgatgaccag
gagccggatacggactccggggagatctccttgggggcggggcaacacaagatgccgcat
gttgagatggtcgctccagctcatacgcacgaggatgaaacaccagccggtcacatattt
agtcaagtccccagaaaatggagctttcaccaagggacagcactcacaggagcccccaaa
gtgaaggaaatgagtgaggatgaaaagaattcgatattggtgagcgaagatttccggtac
ttcattgaccacacgtcgcgtgtcatagagagagctttagatgaggtggctgttgatttc
gactacagcaggacaggagatgacgatcttgctaaccagaacctggcaggagagaggctt
aaactgaaccgggagttttttgacgagcgttggtccaaacatcggattgtcacaagcatg
gattggtcaactcagtttcctgagttactggtagcatcttacagtgctaacgaagatgct
cctcatgatccggatggcgtggcactcatctggaattccagattcaaaaagtctacgcct
gagtatgtcttccattgtcagtcagcagtgatgtcaacctgtttcgccaagttccatcca
aatctggtggtgggaggtacatactccggccaaattgttctctgggacaacagagtactt
aaacgcacgcctatacagagaactccactttccgcctctgcacatacccacccagtatat
tgtgtgaacgtagtcggtacccagaatgcccacaatctgatcagtgtgtcgaccgacggc
aaaatgtgctcctggtcgctcgatatgctctcacaaccacaggactgtatggagcttcag
tacacacagacaaaagcagtgaacgtgacaagtttctcctttatgtccggggatgtgaat
aactttgtggttggaagtgaggattgtacagtgtacactgcatgtaggcatggaagcaaa
gcaggtattagtgagtcatttgaaggccaccaaggtcctataaccggtattgactgccac
aaagtagcgggtcagattgacttctctccatactttctgacctcctcatttgactggacc
atcaaactatggagtattaaggaccgtaaattcatccattccttcgaggacaacagtgac
tatgtatacgacgttcagtggtcgccaatccacccggccgtgtttgcgagtgtggacgga
atgggacgtctggatctgtggaatctaaaccaagatacagaggtcccatcagcctccaat
gtactggacacaggtgctgccctgaaccatctgcgctggcaccagaacggtcacatgatt
gctgcagctgatgacatgggccatatctacttgcatgatgttgctgagagttttgccaac
ccgaaatcagatgagtggtcgagatttgttcatacgttacaagaattgaaacagcatgcc
gcggagagggaggaagacactgcattatcaggcataggatcgccgatgcgatga
DBGET
integrated database retrieval system
