Mya arenaria (softshell): 128238566
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Entry
128238566 CDS
T09995
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128238566
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128238566
03041 Spliceosome [BR:
maea03041
]
128238566
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128238566
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128238566
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128238566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_ACIN1
STAT_alpha
RRM_7
DUF4303
Motif
Other DBs
NCBI-GeneID:
128238566
NCBI-ProteinID:
XP_052810576
LinkDB
All DBs
Position
6:complement(47722548..47759560)
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AA seq
619 aa
AA seq
DB search
MTSVENKTPNKPKVESKESSPAVKNNKDERDSKDEVENNNRNRNDNRQGRENRFQNRRGG
HGGRNMNRNWGNRGGHQGRDSGGGGQNQNFNLNPPQTDFTGEMNEGPKEQKKFTGRCRLF
VGNITPDTTEEQFKEMFTPFGEVSELFVNAARGFGFIRLDYRINAEKAKIELDGQMRNNR
VLRVRFATHGAALKIFNLSPFVSNELLEKAFSQFGEVERAVVFVDDRGKSLCEGLVEFAR
KPGAQAAFKRINEGVFLLSSFPRPVRVEMLEQRDEDDGLTEKFVQRNDGFRQDREKEPRF
APPGAFEYEFGLKHREIDNMERERIEMVKKDMEQERHRLAEEMETAVFDFQAEQIRQDLM
RQQEELKRLDEMKNEHVRRRQEQEARRKQQMGGVGGPPDSMMRREEEERRREMMMRASNE
INRGRDGGMNQGGPNRGLSGRPDDMMRGDRPGGMMESRPNDNRGPNTPPMPMAPPPVPPG
MNMEPGRQPGPRGLFSGKQGGNMDGPRFPMPGGSPGGDRPKMDMDRPVGMDRPPHGNMDR
PMKGDHMQRPGPGGPPGRFPGPQGPGGPGNFPPGPGGMPNRFPNMPPGGPMGPNNPNMRG
DRREPPRRDDFDPKRMRRF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtagagaacaaaaccccaaataaaccgaaagtagagagtaaagagagtagc
ccagcagttaagaataacaaagacgaaagggattcgaaggacgaagttgaaaataacaat
agaaataggaatgataatagacagggtcgcgaaaataggtttcaaaatcgtcgcgggggg
cacggaggcagaaacatgaacagaaactggggaaacagaggtggccaccaggggagagac
tcaggcggtggtggacagaatcaaaatttcaatttaaatccgcctcaaacagactttaca
ggggagatgaatgaggggccaaaagaacaaaagaaattcactggaagatgcagactgttt
gtgggtaacataaccccagatacaacagaagaacagtttaaggagatgttcacaccattt
ggggaagtctcagaactctttgtgaatgcagcaagaggatttggtttcatccgattagac
tacagaataaatgcagaaaaggccaaaattgaactagatggacagatgaggaataatcgt
gtcctcagagttagatttgctacacatggtgcagctctcaagattttcaacctatctcca
ttcgtgtcaaatgaacttcttgagaaggcgttttcacagtttggtgaagttgagcgtgca
gtagtgtttgtggatgacaggggcaagtccttgtgcgagggattggtagagtttgcaagg
aagccaggagctcaggcagcattcaagcgaataaatgagggtgtcttcttgctctcatca
ttcccaagaccagtcagagttgagatgcttgaacagcgagatgaagatgatggtctgaca
gaaaaatttgtgcagcggaatgatggcttccggcaggatcgggaaaaagagcccaggttt
gcacctcctggagcattcgaatatgagtttgggctgaaacatcgagagattgacaatatg
gaacgtgagaggattgagatggtgaagaaagacatggagcaagagcgtcacaggcttgct
gaggagatggagacagcggtctttgactttcaggcggaacaaattagacaagacctgatg
agacagcaggaggagctgaagaggctggatgaaatgaagaatgaacatgtgaggcgacgt
caggaacaagaggccaggcggaagcagcagatgggtggagttggggggccgccagacagc
atgatgcgacgggaagaggaagaacgtcgaagagagatgatgatgcgggcatccaatgag
attaatcgggggcgggatgggggaatgaatcagggcgggcccaacagggggctcagtggt
cgtcctgatgacatgatgagaggggacaggccaggagggatgatggagagtcgcccgaat
gacaaccgcgggccaaacacgcccccaatgccaatggctccacctcctgtacctccgggc
atgaacatggaacctggccgtcagcctggacctagaggcttattttctggtaagcagggt
ggcaatatggatggtccgcggttcccgatgcctggcggaagccctgggggggatcgccct
aaaatggacatggaccggcctgttggaatggaccggccacctcatggtaacatggacaga
cccatgaaaggcgatcacatgcagagaccaggaccaggcggtcctccaggaaggtttcct
gggccacagggccctgggggtccgggaaactttcctcctggcccgggaggaatgcccaac
aggttcccaaacatgcccccaggaggtccaatgggcccaaataaccccaacatgcgtgga
gacagaagagagccaccacgaagggatgactttgatcctaagagaatgaggaggttttaa
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