Monopterus albus (swamp eel): 109962521
Help
Entry
109962521 CDS
T05607
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109962521 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109962521 (cnot1)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109962521 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109962521 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
109962521
NCBI-ProteinID:
XP_020459962
LinkDB
All DBs
Position
Unknown
AA seq
2396 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNHHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDNPLHCQKSLKPSSHLFAQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPGKRDILMDRIL
PDSGELAKTMMESSLADFMQEVGYGFCASVDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHAWNVEVLIDVVKEVNPNLNFKEVTYE
LDHQGFMIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHALRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLSAMGSL
NLGSTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSSLGMPTVSTDPFGTRKMSTPGLNAPPTFQQTDLSQVWPEANQHFSK
EIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFF
PQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFK
NRLKDYPQYCQHLASIGHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQ
VQAQAQSQQPGGPKAPQPGQPSTLVTTTTTTTTAAKTTTITRPTPSSFKKDVPPSINTTN
IDTLLVATDQTERIVEPPDNVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYL
VMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLSETYRNIKVLLTSDKAAANFSDRSLLKN
LGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRP
QNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINELKPGNLLKDKEKLKNLEE
QLSAPKKETKPPEEMLPASTTGDFVPFAAPPSTPAPTTTTTTTTTCTTTGPPTPQFSYHD
INVYALAGLAPHININISIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCE
QIIRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPT
TQQRELMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYC
DPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQ
QAWATDDVAQIYDKCMTDLEQHLHAIPPALAMNPLTQAVRCLLEAVAVARNSRDGIAALG
LLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDE
YKYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVT
EADLFHTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQAS
EYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFR
LCTEMCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKI
NLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC
NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR
NVELNKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM
RLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNL
QVSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT
EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW
GLLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTSAS
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactacagagccagccagcaagaaatacagcatattgtaaatcatcacgga
cccgaggctgacaggcatctactacgctgtctcttctcccatgtggatttcagtggtgat
ggtaaaagcagtggcaaggattttcaccagacgcaatttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaattttatctctactctttgttacgccattgacaatcccctgcac
tgccagaagagtttgaagccgtcttcccacttattcgctcaactgagtaaagttcttaag
ctcagcaaggtccaagaggtgatatttggccttgctttgctcaactccagcaacacagac
cttcgtggttttgctgcgcagttcatcaagcagaaacttccagacctccttcggtcatac
gttgacgctgatcttggaggaaaccaggaaggtggcttccaagacattgccatagaggtc
ttgcacctactgctctcccatctactgtttggccagaagggagccagtggggtaggacaa
gagcaaattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgcttgcaccactgctgtaccctggaaaacgggacattctgatggacaggatcctg
ccagactcgggggagttagcgaagaccatgatggagagttctcttgcagactttatgcaa
gaagttggatatggcttttgtgctagtgtggatgagtgcagaaacataatcatccagtat
ggggtgagagaggtgactgccagccaggtagccagggtcctgggcatgatggctcgtacc
cactctggtctgacagatggcatcccactacagtcaatctctgctccaggaagtggtatc
tggagtgatggtaaagataagaacgatggctcacaggcacacgcttggaatgttgaggtt
ctcatcgatgttgtcaaggaagtgaatcccaacttgaacttcaaagaggtgacatatgaa
ctggaccaccaaggttttatgatccgggacagtaaaggcctacagatcgtggtgtatggc
attcagagagggttgggcatggaggtctttcctgtcgatctcatctatcggccttggaaa
catgcagagggacagttgtcattcattcagcactctctgatgagccctgaagtgttttgc
tttgcagactacccttgccacactgtggccattgacatccttaaggctccaccagaggat
gacaaccgggagattgccacctggaaaagtctagacctggtggagagcctgcttaggctg
tctgaggtgggccagtatgagcaggtcaagcagctgtttagtttcccaatcaagcactgc
ccagacatgttggtgctggcattgctgcagatctccacctcctggcacgcactgcgccat
gaactcatctctaccctaatgcccatctttctggggaaccaccccaactctgccattatc
ctgcactatgcctggcatggacaaggtcagtctccctctattcgtcagctaattatgcat
tcaatggctgagtggtacatgagaggggagcagtatgaccaggccaagctgtctcgcatc
ctggatgtggcccaggacttgaagtcattgtcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgtgaatacctcaaacttgataaatgg
ctgactgacaaaatcagagagcatggggaaccttttatccaggcatgtgtcacatttctg
aagaggcgctgcccatccataatggggggtttggccccagacaaggaccagccaaaaagt
gcccagctgcccccagagaccttggctactatgctggcttgcctgcagtcctgtgctggg
agtgtatcccaggagctgtcagagactatcttgaccatggttgcaaactgtagcaatgta
atgaataaagcccggcagccaccaccaggagtgatgccgaagggacgtgcccctagtacc
agcagcctggatgccatttcacctgtacagatggaccctctctctgccatgggttccttg
aacctggggagcacagccacctcccacactcagagcatgcagggtttcccaacctcactg
agttcagcttttagtaatccccagtccccagcaaaggcattcccacctctctccaatcct
aaccccagcacaccatttgggggcattggcagtctgtcctcacagctcccgggtatggac
tctggtcctctgggctcaggcatcggctctggtattggttctagtctggggatgccaaca
gtaagcactgatccttttggcaccaggaagatgagcacaccaggcctgaatgcgccgcct
acctttcagcagactgacctttctcaggtgtggcctgaagcaaaccagcacttcagtaag
gagatagatgatgaagcaaacagttacttccagcgcatctacaaccacccacctcaccca
actatgtctgtggatgaagtactagagatgctgcagagattcaaggattcaaacatcaag
cgtgagcgagaggtgttcaattgtatgcttcggaacttgtttgaggagtaccgattcttt
ccccagtacccagacaaggagctgcacatcactgcctgtctttttggaggcattatcgag
aaggggcttgtcacctacatggccctaggcttggccctccgatatgttcttgaagcctta
agaaaaccctttggatccaaaatgtattactttggaattgctgccctagataggttcaaa
aacagactaaaggactatcctcaatattgtcaacacctggcttcaattggccacttcttg
caattcccccaccatttacaagagtgtgtacagtatatagagtatggccaacagtcacgg
gaccctcctgtgaagatgcaaggctccatcaccacgcctggcagtctagcactagcacaa
gttcaagcccaggcacagtcgcagcaaccaggtggccccaaagccccacaaccaggtcag
cccagcactcttgtcaccaccacaactacaacaactacagcagccaagactaccactata
acaagaccgacacccagcagcttcaagaaggatgtgcctccctccataaacactaccaac
attgacaccctgctggtggccacggatcaaacggaaaggattgtagagcctccggacaat
gtacaggagaagattgcttttatcttcaacaacctgtcacagtccaacatgacacagaag
gtagaggagttgaaagagactgtgaaggaggagttcatgccctgggtgtctcagtacctg
gtgatgaagcgtgtcagcattgagccgaacttccacagtctctattccaattttttggac
actctcaagaacccagagtttgttaagatggttctcagtgaaacttataggaacatcaag
gttctgttgacctctgacaaggcagctgccaatttctctgatcgctctctgctgaagaac
ctgggccactggctgggcatgattacactggctaaaaacaagcctatcctctatactgat
ctggaagtgaagtctctgctcttggaggcctacgtgaaaggccagcaggagctgctttat
gtggttccctttgtggccaaagttttggaatccagtctacggagcatggttttcagaccc
cagaacccctggaccatggccatcatgaatgttctcgctgaactgcatcaggaacatgac
ctcaagctgaacttaaagtttgagattgaagttctgtgtaagaacttgtctctggacatt
aatgagctcaagccaggaaacctgctgaaggacaaggagaagttaaagaacttagaggag
cagctgtctgcaccaaagaaagagacaaagcctccagaggaaatgctgccagcctctacc
acaggagactttgttccatttgcagctcctccctccaccccagctcccaccaccaccacc
accaccactaccacctgtacaaccactgggcccccaaccccacagttcagttatcatgac
atcaatgtgtatgccttggcaggcctggccccacacatcaatataaatatcagtattcct
ctgctacaggctcatccccaattgaagcagtgtgtacggcagtcggtggagcgggctgtc
caggagctggtgcaccctgtagttgatcgctctatcaaaattgccatgacaacctgtgag
cagattatcaggaaggactttgccctggattctgaggagtcacgtatgcgtgtggctgcc
caccatatgatgagaaacctgactgctggcatggccatgatcacctgtcgtgagcccctg
ctcatgagcatcgccaccaaccttaagaacagttttgctgctgcacttagagcaccaaca
acccaacaaagggaattgatggaggaggctgcagctaggattgcgcaagacaactgtgaa
ttggcatgttgctttattcagaaaacagctgtggagaaggctggccctgaaatggacaag
agactagccacggagtttgagctgaggaagcatgcacggcaagagggacgtcgttattgt
gaccctgttgttttgacttaccaggctgaacgtatgcctgagcagatcagacttaaggtg
ggaggcgtagaccctaagcaactagctgtgtatgaggagtttgccaggaatgttccaggt
ttcttacccagtaatgatctctcccaacctactggtttcttggctcagcccatgaagcaa
caggcatgggccacagatgatgtggctcagatctatgataagtgcatgacagacttggag
cagcatcttcatgccatccctcctgcccttgccatgaaccctttgacccaggccgtgcga
tgccttttggaagctgttgctgtggcgagaaactccagagatggcattgctgcacttggc
ttactgcagaaggctgtggaaggtcttctggatgctactagtggggctgatgctgacttg
ctgcttcgctacagagagtgccacctgttggtgcttaaagccctacaggatgggcgtgcc
tatggaccacagtggtgcaataagcagattactaggtgtctgattgaatgccgtgatgag
tacaaatataatgttgaggcagtggagcttctgatcaggaaccatcttgtcaatatgcag
cagtatgacctgcacttagcacagtcaatggaaaatggactgcactacatggcagttgca
tttgccatgcagttggtaaagctgctcctggtagatgaacgcagtgtcagccacgtcaca
gaggctgacctcttccacacaattgagactttaatgaggacctgtgcacactccagagcc
aatgcacctgagggacttccccagctgatggatgttgttcgctccaactatgaggccatg
attgacagggcccatggcggacctaacttcatgatgcactctgggatttcacaggcttca
gaatatgatgatcctccaggcctaagggagaaggcggagtacctcctgagggagtgggtc
aacttgtatcactcagctgctgctggcagggatagcaccaaagctttctctgcctttgtt
ggccagatgcaccagcagggtatcttgaagacagatgacctgatcacaaggttcttccgg
ctgtgcacagaaatgtgtgtagagataagctatcgggcacaagctgagcagcagcacaat
ccagctgccagtgcagctatcatcagggccaagtgttaccacaatctggatgcttttgtt
agactcattgcactgctggtcaaacactctggagaggccacaaacacagtgacaaaaatc
aacctcctcaacaaggtgctgggtattgtggttggggtgttgatccaggaccatgatgtt
cgtcagacagaattccagcagctgccataccaccgcattttcatcatgctgctgttggag
ctcaatgcccccgaacatgtcctcgagaccatcaacttccagacactcactgctttctgc
aataccttccacatcctgaggcccaccaaagcacctggctttgtgtacgcctggctggaa
cttatctcccatcgcatcttcatcgccaggatgttggcacacacaccacaacagaagggt
tggcccatgtatgcacagctgctgattgatctcttcaagtacttggctcctttcctgagg
aatgtcgagctcaacaaacctatgcaaatcctctacaagggcacactgcgagttctgcta
gttctgctgcatgacttcccagagttcctttgtgactaccattatggcttctgtgatgtt
attccacccaactgcatccaactccgcaacctcatcctcagtgcctttccgcgcaacatg
aggctccctgatcctttcacaccaaatctcaaggtggacatgctgagtgagatcaacatt
gctcctcgtatcctcaccaacttcacaggcgttatgccttcacagttcaagaaggatctg
gactcgtatctgaagacccgctcaccagtcactttcctgtccgagctccgtagcaacctc
caggtgtctaatgagccaggaaaccgctacaacatccagctgatcaatgctctggtgttg
tatgtaggaacacaggcaatcgctcacatccacaacaagggcagcaccccctccatgagc
acgatcactcactctgcacacatggacatcttccagaacctggctgtagacctagacaca
gaggggcgttacctgttcttgaatgcaattgccaatcagctgcgctatcccaacagccac
actcactatttcagttgcaccatgctctatctgtttgctgaggccaacacagaggccatc
caggagcagatcaccagggttctgttggagaggctgatagtgaacaggcctcacccatgg
ggtcttctgatcaccttcatcgagctgattaagaaccctgccttcaaattctggagccat
gactttgtacactgtgcccctgagattgaaaagctgttccagtcagtagcccagtgctgc
atgggacagaagcaggcccagcaggtgatggaaggcaccagtgccagctag
DBGET
integrated database retrieval system
