Marinovum algicola: MALG_02961
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Entry
MALG_02961 CDS
T03981
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
malg
Marinovum algicola
Pathway
malg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MALG_02961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malg03021
]
MALG_02961
03400 DNA repair and recombination proteins [BR:
malg03400
]
MALG_02961
Enzymes [BR:
malg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MALG_02961
Transcription machinery [BR:
malg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MALG_02961
DNA repair and recombination proteins [BR:
malg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MALG_02961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AKO98111
LinkDB
All DBs
Position
complement(3020474..3024610)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQSFLGQKRLRRYYGKIREVLAMPNLIEVQKSSYDLFLKSGDQLEPMDGEGIKGVFQSV
FPIKDFNETAVLEFVDYALEKPKFDVEECQQRDLTYSAPLKVTLRLIVFDIDEDTGAKSV
KDIKEQDVYMGDMPLMTPNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYALGLDQEAIMDAYYNTVTYSLRK
GEGWVTKFFPERVRGTRPTYDLVDADSGEIIGEAGKKVTPRAVKKLIDEGKVKDLLLPFE
QIVGKFAAKDIINEENGAIYVEAGDELTWEVDKDGDVTGGTLKELIDAGVTEIPVLDIDN
ITVGAYMRNTMAQDKNMGRDSALMDIYRVMRPGEPPTVEAASALFDTLFFDSERYDLSAV
GRVKMNMRLALDKPDTQRTLDREDIVACIKALVDLRDGRGDIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGPNIGLINSLATFAR
VNKYGFIETPYRVVKEGTVTDEVHYMSATEEMRHTVAQANANLDENMKFVNDLVSTRKSG
DYTLSPNENVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPTLRSEAPLV
GTGIEEIVARDSGAAVTARRGGIIDQVDAQRIVIRATDNLEVGDPGVDIYRMRKFQRSNQ
NTCINQRPLVKVGDTVQQGEVIADGPSTDMGELALGKNVIVAFMPWNGYNYEDSILISER
IARDDVFTSVHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGADVEPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDFGTVVEVRVFNRHGVEK
DERALQIEREEIERLARDRDDELAILDRNIYARLSDLILGKVAVKGPRGVRPNSEITQDL
LDSLSRGQWWQLAIEDEEDAKIVEALNEQYEAQKRQLDARFEDKVEKVRRGDDLPPGVMK
MVKVFIAVKRKLQPGDKMAGRHGNKGVISRVVPMEDMPFLADGTPVDFCLNPLGVPSRMN
VGQILETHMGWAARGLGIKVDDALDEYRRSGDLTPVREAMRIAYGDEVYEEGLSDMDENR
LLEAAGNVARGVPIATPVFDGAKEGDVNDALVRAGFSESGQSVLFDGRTGEQFSRPVTVG
VKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEEDE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagcttccttggccagaaacgtcttcgccggtactacggcaaaatccgtgaa
gtcctcgcaatgccgaacctcatcgaggttcagaaaagctcttatgacctgttcctgaag
tccggcgaccagctcgagccgatggatggcgagggcatcaagggtgtcttccagtcggtc
tttccgatcaaggatttcaacgagaccgcggttctcgaattcgtcgattacgcgctggaa
aagccgaagttcgacgtcgaggaatgtcagcaacgcgacctgacctatagcgcgccgctc
aaggtgacgctgcggttgatcgtgtttgatatcgatgaggataccggcgcgaaatccgtc
aaggatatcaaggaacaagatgtctacatgggcgacatgcccctgatgacgccgaacggc
acctttgtcgtgaacggcaccgagcgggtcatcgtttcccagatgcaccgttcgccgggc
gtgttctttgaccatgacaagggcaagacccattcctcgggcaagctgctctttgcctgc
cggatcatcccctaccgtggctcctggctcgactttgaattcgacgccaaggacatcgtc
tttgcccggatcgaccgccgccgcaaactgccggtgacgaccctgctctatgcgctgggc
ctcgatcaagaggcgatcatggacgcctattacaacaccgtgacctattccctgcgcaag
ggtgagggctgggtgaccaagttcttccccgagcgtgtgcgcggcacccgcccgacctat
gacctggtggatgccgacagtggcgagatcatcggcgaggccggcaagaaggtgacgccg
cgggcggtcaagaagctgatcgacgaaggcaaggtcaaggatctgctgctgcccttcgag
cagatcgtcggcaagttcgccgccaaggacatcatcaacgaggaaaacggcgcgatctac
gtcgaggccggcgacgagctgacctgggaagtcgacaaggatggcgatgtcaccggcggc
accctgaaagagctgatcgacgcgggcgtcaccgagatcccggtgctggatatcgacaac
atcaccgtcggcgcctacatgcgcaacaccatggcgcaggacaagaacatgggccgcgac
agcgcgctcatggatatctaccgcgtgatgcgcccgggcgagccgcccaccgtcgaggct
gcttcggcactcttcgatacgctgttcttcgacagcgagcgctatgacctctcggccgtt
ggtcgcgtgaagatgaacatgcgtctcgcgctcgacaagcccgacacccagcgcacgctg
gaccgcgaggatatcgtcgcctgcatcaaggcgctggtggatctgcgcgacgggcgcggc
gacatcgacgacatcgaccacctcggcaaccgccgggtccgttcggtcggcgagctgatg
gaaaatcagtaccgcgtgggtctcctccgcatggagcgcgcgatcaaggagcgcatgtcc
tcggtcgagatcgacaccgtcatgccgcaggatctgatcaacgccaaaccggcggcggcc
gccgtgcgcgaattcttcggctcgtcgcagctgtcgcagttcatggaccagaccaacccg
ctgtcggaagtcacccacaaacgccgtctctcggcccttggcccgggcggtctgacccgc
gagcgcgccggctttgaggtgcgcgacgttcacccgacacactatggccggatgtgcccg
attgaaacgccggaaggcccgaacatcggtctgatcaactcgctggccacgtttgcccgc
gtgaacaaatacggcttcatcgaaacaccgtaccgtgtggtcaaggaaggcaccgtcacc
gacgaggtgcactacatgtccgcgaccgaggaaatgcgccataccgtggcgcaggccaac
gccaacctcgacgagaacatgaagttcgtgaacgatctggtctcgacccggaagtcgggc
gactacaccctgtcgccgaacgagaacgtggacctgatcgacgtgtcgccgaaacagctg
gtttcggtcgctgcctcgctcattccgttccttgaaaacgacgacgccaaccgcgctctg
atgggctcgaacatgcaacgtcaggcggttccgacgctgcgctcggaagcgccgcttgtg
ggcaccggcatcgaggaaatcgtcgcccgcgactccggtgcggcggtgaccgcgcgccgt
ggcggcattatcgaccaggtcgatgcccagcggatcgtgatccgggccaccgacaatctc
gaggtcggcgaccccggcgtcgatatctaccggatgcgcaagttccagcggtcgaaccag
aacacctgcatcaaccagcgtccgctggtcaaggtgggtgacacggtgcagcagggcgaa
gtgattgccgacggtccctcgaccgacatgggcgaactggccctcggcaagaacgtcatc
gtcgccttcatgccgtggaacggctacaactacgaagactcgatcctgatctccgagcgc
atcgcgcgtgacgacgtctttacctcggtccacatcgaggaattcgaagtcgctgcccgc
gataccaagctcgggccggaagagatcacccgcgacatccccaacgtcggcgaggaagcc
ctgcgcaacctcgacgaggcgggcatcgtctacatcggcgccgacgtcgagccgggcgat
atcctggtgggcaagatcactccgaagggtgaatcgccgatgacgccggaggaaaaactc
ctgcgcgccatcttcggtgagaaagcctcggacgtgcgcgacacctcgctgcgggtgaag
ccgggcgatttcggcaccgtcgtggaagtgcgtgtcttcaaccgtcacggcgtcgagaaa
gacgaacgggcgttgcagatcgagcgtgaggaaatcgagcgtctggcccgtgaccgggac
gacgagctcgccatcctcgaccgcaacatctatgcgcgtctcagcgatctgatcctcggc
aaggtggcggtcaagggtccgcgcggcgtgcgcccgaactccgagatcacccaggatctg
ctcgacagcctgagccgtggccagtggtggcagctggcgatcgaggacgaggaagacgcc
aagatcgtcgaggcgctgaacgagcaatacgaggcgcagaaacgccagctcgacgcccgc
ttcgaggacaaggtcgagaaggtccgccgcggcgacgacctgccgccgggcgtgatgaaa
atggtcaaggtcttcatcgcggtgaagcgcaagcttcagccgggcgacaagatggccggc
cgtcacggcaacaagggtgtgatttcgcgcgtggtgccgatggaggacatgccgttcctc
gccgatggtacgccggtcgacttctgcctcaacccgctcggcgttccctcgcggatgaac
gtcggtcagatcctcgagacgcacatgggctgggccgcacgcggtctgggcatcaaggtc
gacgacgcgctggacgaataccggcgctcgggtgatctgaccccggtgcgcgaagcgatg
cggatcgcctatggcgacgaggtctatgaagaaggcctgtcggacatggacgagaaccgt
ctgctcgaggcggcgggcaacgtcgcccgtggtgtgccgatcgcgacaccggtcttcgac
ggtgccaaggaaggcgacgtcaacgatgcgttggtgcgtgcgggcttctcggagtcgggc
caatccgtgctcttcgacggccgcaccggcgagcagttctcgcgtcctgtcaccgtgggc
gtgaagtacctgctcaagctgcaccacctggtggacgacaagatccacgcgcgttcgacc
gggccctacagcctcgtcacccagcagccgctgggcggtaaggcgcagttcggtggccag
cgcttcggggagatggaggtctgggctctggaagcttacggcgccgcctataccctgcaa
gagatgctgaccgtgaagtcggacgatgtggccggccggaccaaggtctatgaatcgatc
gtcaagggcgaggacaacttcgaggcgggcgttcccgagagcttcaatgtgctcgtcaag
gaagtccgcggcctcggcctgaacatggaactcctggatgcggaggaggatgagtga
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