Megalobrama amblycephala (Wuchang bream): 125247649
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Entry
125247649 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC125247649
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125247649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125247649
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125247649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
125247649
NCBI-ProteinID:
XP_048015019
LinkDB
All DBs
Position
LG15:complement(18525510..18557251)
Genome browser
AA seq
1551 aa
AA seq
DB search
MFNWVVKVVPHPPDTQNDLRDEAITANGKTSNPDKFNSCKTGREEDQSSQTSQGSVQNGM
LSWLSNGFASALPQPAGSPLLARANADAKSLQEEGSADRARVIGWISQGIGKVVPQPDEK
YMEEETCEVTEVYDIKDLPDSEPLPHIPVVELVSEDEASEVEIPAQFPPNVMSWIKNGFQ
NAIPHHVTRPPNSNSSTPRSSQCSNKVYSPPPESVTSMTEIDLKTPSMVGRIVQGLGLSM
PQPVLKNKEICLQEDGRIAQNGSARSDLILEEVDSEDEAQAKETCPAANSPPYSQHQSQP
QTPWSPEHSLPLSITTPTQAHIELEDAETQTARWTPMIDSIRREAEDTAILIMEERLIQE
RLAMARMAEEVARQTAEMAVREFTQARLGIQTIVEEPEDVDQELQVLQEEDSDIEVIRNQ
ITECRAPSVKEFVPEGQEAEAEDTAFTVKTPVEEFKSSSPLQEEPEPESEPEPEELHEEE
EEPRDSSEAEEEPDPITQQPQSITSTSVSRTDSPVESAATEEESSVPSRCDALKSCFMRV
PYAQQALDNFNQFLKDIDVTLPKVPSVPNLPPALSQITQQLPSLPPQLAQLPEQISQLPQ
RISQRFSKITPQFPNQTLFSAPQFPKFPVQLSSFPQQLSNIPQQISNLPQKLSNFPQRLT
SIPRFSIIPQQVSNIPQQLSSIPQKISSIPQKISSIPQCAQRCYTNIQSRLNKLKPEQEP
KEQPQKSRDLELDRLVRQSPLHSPRTPSPSSPCSVLDLPNVPSYPRLPPITPSRQLSGVS
NPAFHIEDDPTSARPSVSSRLSVHPAVNVEDVDSDRGRSRPIPPIINPQDPNLKTLTVPG
VRKANRTSKRLYSQDDEEEEELETSVRAWPSQSSISSADDGLNQRPASSASQTSTIVNER
LQELVKLFKERTERVKEKLIDPDNSDDETPPASPAKQAPAPPPEPPAEQKTEQEVSEAPA
EKEEEKTKLLCCKVKPQSRIGRLLRYRFPTSIDPFTNLFYVLWLFCVSLAFNWSAWMIPV
RWAFPYQTPDNIHVWLLIDYLCDAIYILDILVFQPRMQFVQHGDIVSGAKEMRDNYIKAV
RFKLDVVSLLPLELLYFKTGINPLLRLPRILKFMSFFEFNKRLEAILTNAYVYRVIRTTT
YLLYAVHCNACLYYWGSSYEGLGFSDWAYDGTGNSYIRCYYFAVKTLLTIGGLPGPTTLF
EIVFQLINYFIGVFVFSIMIGQMRDVVGAATAAQTNYRACVDNTVKYMASYRIPKDVQNR
VKTWYSYTWQSQGMLDEQELLDQLPDKMRLDIAVDVSYNIISKVPLFQGCDRQMIFDMLK
RLRSVVYLPGDYVCKKDEVGREMYIIKAGEVQVVGGPDGKTVFVTLKAGAVFGEVSLLAV
GGVNRRTANVVARGFANLLILTKKDLNEIMVHYPESQKLLRRKAKKMLMKDKKPAQKKEE
EKEPIPIIPPRAETPKLLKAALEMTEKSGMKGTWSKLKDKTNRSSVSLQRSISSSVAPNS
PVHEPHSEQDADTLSQISDSSIQIPTTPTGTGEGNVFAEEGPAEEETKSQK
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggttgtgaaggtcgtacctcatcctcctgatacacagaacgatctgagg
gacgaggcgatcacagcgaatgggaaaacatcaaatccagataagttcaattcatgcaaa
acaggcagggaggaagaccaatcgtctcaaacctcacagggcagtgttcagaatggtatg
ttgagctggctttccaatgggtttgcgagtgcgctgccccaacctgcagggagtcctctt
cttgcgagagccaacgctgatgctaaatcactgcaggaggaaggttctgctgacagggct
agagttattggctggatctcgcagggaattggaaaggtggtcccgcagcctgatgagaaa
tacatggaggaagagacatgtgaagttacagaggtttatgatatcaaggacctcccagat
tcagagcctttgccacatataccagtagtagagctggtgtcagaagacgaggcgtctgag
gtggaaatcccggctcagttccctcccaatgtaatgagctggataaagaacggcttccag
aatgctataccgcaccatgtgaccagacccccaaattccaattcctcaacaccgaggtca
tcacaatgctcaaacaaagtatattcacctcctccagagtcagtaaccagcatgacggag
atcgatttaaaaactcccagtatggtgggcaggattgttcagggcctgggtctttcaatg
ccacagccagtgcttaaaaacaaagaaatatgtttgcaggaggacgggaggattgcgcaa
aatggcagtgctcgatcagatctcattcttgaggaggttgactctgaagatgaggctcaa
gcaaaggaaacatgtccagcagcgaactcccctccgtattcacaacatcagtcccaacct
cagacaccttggtccccggaacattctcttccactgagcatcaccacacccacacaagca
cacatagagctggaggatgcagagacccaaactgcacgatggacgcccatgatcgacagc
atcaggagagaggcggaggacactgccatattaatcatggaggaacggttgatacaggag
cgtctagcaatggcccgcatggcagaagaagtggcccggcagacagcagagatggccgtc
agggagttcacacaggcccggctcggcattcagaccattgtggaagagccagaagatgtt
gatcaagaactacaagtgctgcaggaagaggacagtgatatagaagtcatacggaatcaa
attacagagtgtcgagcaccttcagttaaggagttcgttccagaaggacaggaggcagaa
gctgaagacactgcattcacagttaaaacccctgtggaggagttcaagtcctcttcacct
ctacaggaggaaccagagcctgaatctgaacctgagcctgaggagcttcatgaggaggag
gaagagcccagagactccagtgaagctgaagaagaacctgaccccatcactcagcaacct
cagtccattaccagcacctccgtttcacgaactgattcaccggtggagagtgcagctact
gaagaggaaagtagtgtcccttccagatgtgatgcgctgaagagctgtttcatgcgtgta
ccatatgcacaacaggcccttgacaacttcaaccagttcctgaaagacattgacgtcact
ctgcctaaagtgccttctgtgcccaatctgccccctgctctatctcagatcacccaacag
ctgccgtcgctccctcctcaactggcacagctgccagaacaaatctctcagctaccccaa
cggatttcccagcgattctccaaaatcaccccacaattcccaaaccagacgctttttagc
gctcctcagtttcccaagttccctgtgcagttatcaagcttcccacaacagctttccaac
attccgcaacaaatatccaacctcccgcaaaagttgtccaactttccacaaaggctgacc
agcattccgcggttttccatcattccgcaacaggtctccaacattccacaacaactctcc
agcattccacaaaaaatatccagcattccacaaaagataagcagcattccacagtgtgcc
cagcggtgctacactaacattcagagccgtctcaacaaacttaagccggaacaggagccc
aaggagcagccgcagaagagtagggatctggaattggaccgccttgtccgccagtccccg
ctccattccccccgtaccccttcgccctcttccccatgctccgtcctagacctgcccaat
gtgccctcttacccccgtctgccacccatcaccccttccaggcagttgtcaggcgtctcc
aaccctgccttccacattgaggatgaccccacctctgctagaccctcagtgagctccaga
ctgagtgtgcacccagccgtgaacgtggaagatgttgattctgaccgaggaagatctcgc
cccataccacccataataaacccacaggatcccaacctcaagacccttactgtgcctggt
gtccgtaaagccaatcggaccagcaagagactttactcacaagatgatgaggaagaggag
gagttagaaacctcagtccgggcctggccaagccagagtagcatctcaagcgcagatgac
gggcttaatcaacggccagcctcttctgccagccagacgagtaccatagtaaacgagagg
ttacaggagctggtcaagctgttcaaagagagaacagagcgggtcaaagagaaactgatt
gatccagataattcagatgacgagacaccacctgcctccccagctaagcaagctccagct
cctcctcctgaacctccagcagagcagaaaacagagcaggaggtgtctgaggcccctgcc
gagaaagaagaagagaaaacgaagctcctgtgctgtaaagtgaaacctcagtccaggatt
ggtcggcttctgcggtaccgttttccaaccagcatcgaccccttcactaacctgttctac
gtactttggctgttttgcgtgtctttggcgtttaactggagtgcgtggatgattcctgtg
cgttgggcgtttccttatcaaacaccggataacatccatgtgtggctgttgattgactac
ttatgtgatgccatctatattctggacatcctggtctttcaaccccgaatgcagtttgtg
cagcatggggacattgtgagtggggcgaaagaaatgagagataattacatcaaagctgta
cgattcaagctggatgttgtcagtctacttcctctagagcttctctacttcaaaacgggg
attaatccacttctccgcttacccaggatcctgaagtttatgtctttctttgagttcaac
aagcgtctggaagctatcctgaccaacgcttatgtttacagagtcattcgaaccaccacc
tacctgctgtatgccgtccactgcaatgcctgtttgtactactggggctcctcatatgaa
ggtctgggtttctcagattgggcctatgatgggacgggaaatagttatattcgctgctac
tactttgctgttaagactctgctgaccattggcggcctgccaggacccacaacacttttt
gagattgtgtttcagctcatcaattactttattggagtgtttgtgttctccatcatgatt
ggtcagatgagagatgttgtgggtgcagccaccgcggctcagacaaactatcgtgcctgt
gtggataacacagtaaagtacatggcctcctaccgcatccctaaagatgtgcagaacaga
gtgaaaacctggtacagctacacgtggcagtcccaaggcatgctggatgaacaagagctt
ctagatcaactacctgataagatgaggctggatatagcagtggatgtcagctacaacatt
atcagtaaagtgccactttttcagggctgcgatagacagatgatctttgacatgttgaag
aggctcagatcagtggtgtatcttccaggagactatgtctgcaagaaggatgaagtaggc
cgtgagatgtacatcataaaggcaggggaagtccaggtagttggtggtcccgatggaaag
acggtgttcgttaccctgaaagcaggagcggtgtttggagaggtcagcttgcttgctgta
ggcggagtaaaccgacggacagctaacgttgtagcacgtggttttgctaacctactcatc
ctgaccaaaaaggacctgaatgagatcatggtgcactatccggaatcccagaaactgctc
cgcaggaaagcaaagaaaatgttgatgaaggataaaaagccagctcagaagaaagaggaa
gaaaaggagcccatcccaattattcctcctcgcgcagagacacccaaactgttaaaagcg
gcgctggagatgacggaaaaatcaggaatgaaaggaacatggtctaaactgaaggacaag
accaacagatcgagtgtctccttgcagcggtccatctcttcttctgtggcgcccaactca
ccagtccatgaaccgcactcggagcaagacgcagacacactgtctcaaatatcagacagc
tcaattcaaatccccacgacccccaccggtactggagaagggaatgtatttgctgaagag
ggcccagcagaggaggaaacaaaatcacagaagtaa
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integrated database retrieval system
