Megalobrama amblycephala (Wuchang bream): 125252746
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Entry
125252746 CDS
T08212
Symbol
si:dkeyp-50d11.2
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04141
Protein processing in endoplasmic reticulum
mamb04210
Apoptosis
mamb04217
Necroptosis
mamb04218
Cellular senescence
mamb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125252746 (si:dkeyp-50d11.2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125252746 (si:dkeyp-50d11.2)
04217 Necroptosis
125252746 (si:dkeyp-50d11.2)
04218 Cellular senescence
125252746 (si:dkeyp-50d11.2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125252746 (si:dkeyp-50d11.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125252746 (si:dkeyp-50d11.2)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125252746 (si:dkeyp-50d11.2)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C2: calpain family
125252746 (si:dkeyp-50d11.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
125252746
NCBI-ProteinID:
XP_048022262
LinkDB
All DBs
Position
LG18:complement(15679441..15695333)
Genome browser
AA seq
704 aa
AA seq
DB search
MEPICATGVAARLRSDWDRNEGFGQNHMALKFLGQDFEYLRERCLQSGCLFEDETFPAQQ
SSLGFKELGPGSAKTKGVRWMRPTEFCTDPHFIVDGATRTDICQGALGDCWLLAAIACLT
LNEPLLHRVVPHGQSFHQQYAGIFHFQFWQFGDWVDVVIDDRLPVRDGKLLFVHSAEGAE
FWSALVEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELKKAPPNLFSIIKRAVERG
SLMGCSIDITSFFDMEAVTFKKLVKGHAYSITGVEEVEYRRNLTKLLRIRNPWGEVEWMG
PWSDESREWREIDPSVRSRLHNCREDGEFWMSFSDFMREFSRLEICNLTADALQSSELKK
WNTSLYPGEWRRGSTAGGCRNYPATFWINPQFKIVLKEPDIENQNDCTFLVALMQKNRRK
LRREGKDMETIGFAIYEVPKECLGQVGVHLKRDFFLKHTSSARSELFINLREVSSRFCLP
PGEYIIVPSTFEPQKEGDFVLRVFSEKAADSQELDDEISADVPDEPALRESDIDEGFKAL
FAKLAGPEMEINVSKLQMILNRVVGKHKDIKTDGFGKESCRAMINLMDTTGLGKLGLIDF
HVLWEKIKRYLAVFRKFDLDKSGTMSSYEMRLALESAGFKLTNNLFQLIILRYAKTDLNV
DFDNFVACLIRLETMFKTFKAMDTDEDGLVSFSFTQWITLTMFT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaatttgtgccacgggagtcgctgctcgtttgaggagtgactgggatcgaaat
gagggatttggtcagaaccatatggccctgaagtttttgggccaagattttgaatacttg
cgtgagcgctgccttcagagtggatgtctgtttgaggatgaaacattcccagcccagcag
tcttctttgggatttaaagagctgggccctggatctgccaaaaccaaaggtgttcgctgg
atgaggccaacggagttctgcactgatccacattttatcgtagatggggccacacgcacc
gacatctgccaaggagctctaggagattgttggctgctggcagccattgcgtgccttacc
ctcaatgaacccttgctgcatcgggtggtgcctcatggccagagcttccatcagcaatat
gctggaatctttcacttccagttttggcagtttggggactgggtggatgtggtgattgac
gaccggctgcctgtcagagatgggaagctgcttttcgtccactcagctgagggagcagag
ttctggagcgccctggtggagaaggcatatgcaaagttgaacggctgctacgaggctctt
tccggaggctccacgtctgaggggtttgaggacttcaccggtggagtgacagagatgtat
gagctgaaaaaagctccacccaacctcttcagcatcatcaaaagagctgtggagagaggc
tccctgatgggctgctcgatagatatcacaagtttctttgacatggaggctgtcaccttt
aaaaagctagttaaaggtcacgcctactctattactggagtggaggaggtggagtacaga
agaaacctcacaaagctgttgcgcatcagaaacccttggggagaagtggagtggatgggg
ccctggagtgatgagtcaagggaatggcgtgaaatcgacccgtctgtaaggtcccgtctg
cataactgcagagaggatggagaattctggatgtcgttcagtgacttcatgcgagagttc
agcagactagagatctgtaacttgacagcggatgcgctacagagcagcgagctgaagaag
tggaacacgtccctgtatcctggtgaatggagaagaggaagcactgctggcggctgcagg
aattatccagcaacattttggatcaatccccagtttaaaattgtcttgaaggaaccagat
attgagaatcaaaatgactgcacttttctagtggccctgatgcagaagaatcgaagaaag
ttacgtcgggagggcaaagacatggagacgattggatttgccatttatgaggtccctaaa
gagtgtctgggccaggtaggtgtgcatctgaagcgtgattttttcctcaaacacacatcc
agcgctcgttccgagctcttcatcaaccttcgagaggtgagctcccgtttctgcctgcca
ccaggggaatatatcatcgtcccctccacctttgagccccagaaagaaggagactttgtg
ctgagggtcttctcagaaaaggctgctgactcccaggagctagatgatgaaatttcagca
gatgtaccggatgagcctgcgctccgggagagtgacattgacgagggcttcaaggcactt
ttcgcaaagctggcagggccggaaatggagatcaatgtgtccaaactccagatgattctg
aaccgagttgttggcaaacataaagatataaagacagacggatttggtaaagagtcctgt
cgagccatgataaatcttatggatacaactggtctaggaaagctgggactgatagacttc
catgtgctctgggagaagatcaaacgatatcttgctgtgtttaggaagtttgacttggac
aagtctggcacaatgagctcttatgaaatgcgtctggcattagaatcagcaggcttcaag
ttaaccaacaacctgttccagctgataatcctgcgctatgcaaagacagacctcaacgtg
gactttgacaactttgtggcttgtctgatccgcctggagactatgtttaaaacttttaaa
gcaatggacactgatgaagatggattggtatccttcagctttacccagtggatcaccctc
actatgtttacttag
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