Megalobrama amblycephala (Wuchang bream): 125254188
Help
Entry
125254188 CDS
T08212
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125254188 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125254188 (cngb1a)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125254188 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125254188
NCBI-ProteinID:
XP_048024621
LinkDB
All DBs
Position
LG19:38521881..38639645
Genome browser
AA seq
1282 aa
AA seq
DB search
MFSWVIKVVPQPPAAPGKLGEEDQTNASTAAEVTKKEDVQQDANPSKSKEEVSEENSSQN
GVLSWLSHGFNSALPQPVNASKLGNSEIKQEENAVSNSSNTSDQAGMIGWIVQGLGKVVP
QPDEKYKGHTEPEEVTEPAVVPVVKVDPPPAVVPVVKVDPPVQEIKDIRDAEPLPHIPVV
EVVSDEEPDAANVPFSPRVIEWIKNGFEKVVPQSPISLRPPGTETLVQRAASAPVTPCKQ
EPAPEPTPAPAPPPAPAPAPAPAPPPPPAAPPAPAPTPASEPAPAAPEQPKVVEDSKGTN
MVGWIVQGLGRMMPQPVLKPKEDSSDIVQNVCILQDPCDMVLEEVDSDLEAQEREQEQEQ
QDSSLLQVIPNILPHVLAMQEQEDAETQTERWTPLIESIKKEAEETAIANIEERLEQERV
EAARMAEDLARQAAELAVRQLEEEHTSHIIIDTKNEEPDNDDQLPNIQEEENEEDPELQP
FHEESEEENEDSKITESLVDICPAEPSPHESEVSDHPPQSPPPVTTQPERSTSLPPDANQ
EEELPEEECGESSHVKTVPKIIVAPESDSMTLTVPNLMAPSRMQTAPGEEVEDPHMTDLL
SVGEGLERPMSAASQTSIVNERLQELVKLFKGRTERVREKLTDPDDSDEESPSASPAKKP
AEAPPPPPPPPEEKKDAEEAAEEEEKIYEFMGYKFPVPQLKMPEIPDWLRAILEYRFPSS
IDPYTDLTYVVWLFFVTLAWNWNVWLIPVRCTFPYQTPENVHWWLLMDYLCDTIYILDIV
IFQPRLQFVRGGDVVCDKKDMRENYLQTERFKMDVISLFPLDVLYVFTGVKSLWRFPRLL
KYNAFFEFNDRLEAVMSKAYIYRVIRTSAYLLYSLHCNACIFYWGSDYEGLGSTKWVYNG
KGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIGQMRDVVGAAT
AGEAYYRHCVDSTVKYMTSYKIPREVQNRVKTWYDYTWKSQGMLDEQELLVQLPDKMRLD
IAADVNYSIVSKVALFQGCDRQMIFDMLNRLKSVVYLPGDSVCKKGEIGREMYIIKAGEV
QVVGGPDGKTVFVTLRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLADILV
HYPESQKLLRKKAKKMLTKDKKPDEKVKETGEVITERPETPKLFKAALEVASGQTFAKLK
EAYKGATLEPSTSRGPVPPPSPVHRRSPIPRPRVPDEDDMVSETTDSTMVIRMTPRIEGE
EILSVEVGPGEGVEVEEEEPKT
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaagttgttccccagcctccagcagctcctggaaaactggga
gaggaggatcagaccaatgcgtccacagcagcagaagtgacgaaaaaagaggacgtacaa
caagatgccaacccttccaagtcaaaggaggaggtctcagaggaaaacagctctcagaat
ggagttttgagttggctttctcatgggttcaacagtgctctccctcagccagtgaatgcc
tctaaactgggcaactctgaaattaagcaagaggagaatgcagtgagcaacagcagtaac
acgtcggaccaggctggaatgataggatggattgtgcagggactgggaaaagtggttcca
cagccagatgagaaatacaagggtcacacagagccagaggaggtcactgagcctgcagtt
gttcccgtggttaaagtggatcctccacctgcagttgttccagtggttaaagtggatcct
ccagtgcaagagatcaaagacattcgtgatgctgagccgctgcctcatattcctgtggtg
gaggttgtgtctgatgaggagccagacgctgctaacgttcccttctctcccagggtaata
gaatggattaagaatggttttgagaaggtagtccctcagtctccaatcagtcttcgtcct
cctggtacggaaacacttgtccagagggctgcttctgctcctgtgacaccctgcaaacaa
gagccagcacctgaaccaacacctgctcctgcacctccgcctgcacctgcaccagctcca
gcaccagcacctccacctccacctgcagccccgcctgcacctgcacctacacctgcatca
gaacctgcacctgcagctcctgagcagcctaaagtagttgaggattccaaaggcacgaat
atggttggctggattgtacaggggcttggacgcatgatgccacaaccagtactgaaacca
aaagaggacagctctgatatcgttcaaaacgtctgcatcctgcaggacccatgtgatatg
gtgctggaggaggtggactcagacttggaggcccaggagagggagcaggagcaggagcag
caggatagctccttgctgcaggtgatacccaacatcctgccacacgtgctggccatgcag
gagcaggaggacgcggagacacagactgaacgctggacgcctcttattgagagcatcaag
aaggaagcggaggaaacagccatagcaaacatagaggagagactggagcaggaacgcgtg
gaggcagctcgcatggcggaggatctggcccgacaggctgcagaattggccgtcagacag
ctggaggaagaacacacctctcatatcatcattgatacgaaaaacgaagaaccagacaat
gatgatcaactgccaaatatccaggaggaagagaatgaagaagacccagagttacagccg
ttccatgaagagagtgaggaggagaatgaggatagtaagatcacagagagcctggtggac
atctgcccggcggagccgtcaccgcacgagtctgaggtttcagatcacccaccccaaagt
ccaccgcctgtgaccactcagcctgagcgctccacatctttacctcctgatgctaaccag
gaagaggaacttccagaagaagaatgtggagaaagcagccatgtgaagaccgttcccaaa
atcatcgttgcaccagagtcagactcgatgaccctcactgttccaaatctgatggccccc
agtagaatgcagacagctcctggcgaggaagttgaggatccacacatgactgatctactc
agtgtgggcgaaggccttgagcgtcccatgtctgcggccagtcaaacaagtatagtgaat
gagcgactgcaggagctagtcaagctgtttaaggggcgaacagaacgtgtaagagagaaa
ctgactgatccagatgattctgatgaggaaagcccttcggcatctccagccaaaaagcct
gccgaagccccgcctcctccaccacctccaccagaggaaaagaaagacgctgaagaggca
gctgaagaggaggagaaaatctatgagtttatgggatacaagttcccagttcctcagttg
aaaatgcccgagattcctgattggctgagagctatactggagtaccgtttcccgtccagc
attgatccctacacagatttgacctacgtggtgtggctgttctttgtgacacttgcgtgg
aactggaatgtttggctgatccccgtgcgctgcactttcccgtatcagacccctgagaac
gttcactggtggctgctgatggactacctctgtgacaccatttacattcttgacatcgtg
atctttcagcccagactgcagtttgtgagaggaggagacgttgtgtgtgacaaaaaagac
atgagagagaactacttgcaaacagagcgatttaagatggatgtgatcagtctctttcca
ctggatgtcctgtacgtcttcacaggtgtcaaatcactctggcggtttcctcgccttcta
aagtacaatgcattctttgagtttaatgatcgtctggaggctgtgatgagcaaagcatac
atttacagggtgatccggacgagtgcgtacttgctgtactctctgcactgtaatgcctgt
attttctattggggttctgactatgaaggactgggttctactaaatgggtctataatggc
aaaggaaacagttatattcgctgctactactttgctgtgaagactctgatcaccatcgga
ggtttgcctgatcccaccactgtctttgaaatcgtcttccaactggtcaactacttcgtg
ggagtctttgctttctccatcatgatcggtcagatgagagacgtagttggagccgccaca
gcaggtgaggcctactacagacactgtgtggacagcaccgtcaaatacatgacctcctac
aagatcccccgtgaggtccagaaccgagtgaagacctggtacgactacacctggaagtcg
caaggcatgctggatgaacaggagttacttgtacagctaccagataagatgcgtctggac
atcgcagcagacgtaaactacagcattgtcagtaaagtggcgctctttcagggatgtgac
agacagatgatatttgacatgctcaacaggctgaaatctgtggtgtaccttccaggagac
tctgtttgtaaaaaaggtgagatcggccgagagatgtacatcatcaaagctggagaggtg
caggtggttggagggcctgatgggaagacggtgtttgtgactcttagagctggttctgtg
tttggcgaaattagtttgctggcaggtggtggtggaaaccgacgaacagctaacgtaaag
gcccatggttttgctaacctcttcatcttggataagaaggacctggcagacatcttagtg
cactaccccgagtcccagaagctactgcgcaagaaggccaagaaaatgttgaccaaagat
aagaagccagatgagaaggttaaagagacgggtgaggtcatcacggagcggccagagaca
cccaaactcttcaaggctgccctggaggttgcttcaggacaaacgtttgccaagctgaag
gaggcatataagggagcaactctagagccgtcgacctccagaggtccagtgccccctccc
tcccccgtgcaccgccgttcacccattccccggcctcgtgtaccagatgaagatgacatg
gtatcagagaccactgacagcaccatggtcatccgcatgactccccgcattgagggagag
gagatcctttccgtggaggtcggtcctggagagggggtggaagttgaggaggaagagccg
aaaacttaa
DBGET
integrated database retrieval system
