Megalobrama amblycephala (Wuchang bream): 125255123
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Entry
125255123 CDS
T08212
Symbol
gspt1
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125255123 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125255123 (gspt1)
03012 Translation factors [BR:
mamb03012
]
125255123 (gspt1)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125255123 (gspt1)
Translation factors [BR:
mamb03012
]
Eukaryotic type
Release factors
125255123 (gspt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125255123
NCBI-ProteinID:
XP_048026062
LinkDB
All DBs
Position
LG20:12127665..12142627
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AA seq
564 aa
AA seq
DB search
MDSRDIAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSRGPPENDTSDGTDAV
ASMEISEPVVAVENGETDASAVETWEQKGELDEEEPGGGSPADTGCCGDEEQDEMMEEDE
EMPTPKLPPPLPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHTMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSELCPWYTGLPFISHLDSLPNFT
RSIDGPIRLAIVDKYKDMGTVVLGKLESGCIGKAQQLIMMPNRHTVEVLSLLSDDVETDY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKXIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacatagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgaacttcagtccgccttcaccgggctcaacgttaacgctccggaattcgta
ccatcctttctttctcggggtccaccggaaaacgatacgtctgatggcactgatgcagtg
gcaagcatggagatctcagaaccagtggttgcagtggagaacggagagacagatgccagc
gcagtggagacgtgggagcagaagggagagctggatgaagaggaaccaggaggtggatcc
ccggctgacactggatgctgtggagatgaggaacaggatgaaatgatggaggaggatgaa
gagatgccgacccccaagctgcctcctcctctaccagatgcccctaagaaagaacatgtg
aatgttgtgttcattggacatgtggatgcaggcaagtctacaattggtggacagattatg
tatctaactggtatggtggacaaaagaacgctggagaaatatgaacgggaggcaaaagag
aagaacagagagacctggtatctctcctgggctctagatacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcctactttgaaactgagaaaaagcactttact
attcttgatgccccgggccataaaagctttgtacccaacatgattgggggggcatcccaa
gctgacttggcagtgctggtcatctctgccagaaagggtgagtttgagactggttttgaa
aaaggaggtcaaacaagggagcataccatgctggccaaaacagctggagtcaaacatctg
atagtcctcatcaacaaaatggacgatcccactgtgaactggagtttggatagatatgag
gaatgtaaagagaagttagtgccatttctgaagaaagtgggctttaatccaaagaaagac
attcacttcatgccgtgctccggactgacaggagccaacctgaaagaatcttctgagttg
tgcccctggtacacgggattgccgtttatttcacatctggacagcctgccaaacttcacc
agatcaattgatggtcccatcagattggctattgtggataaatacaaggacatgggcacc
gtggtgcttggaaaactcgagtctggatgcatcggaaaagcacaacagcttattatgatg
ccaaataggcacacggtggaggtgttgagtcttctctccgatgatgtggagacggattac
gccgggcctggtgaaaacctgaagctccggctcaaaggcattgaggaggaagagattctc
ccaggttttatcctatgcaatgctgagaacctctgccactcagggcgcactttcgatgcc
cagattgtcattattgaacacaaantcattatatgcccaggttacaatgcagtactacac
atccatacctgcatagaagaagtgcagattacagcattaatctgtctggtggacaagaag
acaggagaaaagagcaagactcgcccacgctttgtcaaacaagaccaagtatgcatcgcc
cgtcttagggctgcaggaactatctgcttagagacttttaaagacttccctcagatggga
cgcttcaccttgagagatgagggtaagacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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