Megalobrama amblycephala (Wuchang bream): 125260246
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Entry
125260246 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125260246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125260246
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125260246
GBAF(ncBAF) complex
125260246
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
125260246
NCBI-ProteinID:
XP_048034473
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All DBs
Position
LG24:22491787..22551990
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AA seq
396 aa
AA seq
DB search
MSVTFSSVRPRGKAEVTQQTIQKMLDENHHLIQCIMDYQSKGKTTECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPNPNINIGPGGMSQGGGGQSLHSQTNMNDSMGTGLPPTSLMQ
SQMNNGPSHAPMQQQPTISMSLPPSSHGTGPGYSHSVPSSQGAPLQGQVAYSSMASRANL
NMQSSQVSVMHQQGTGPHYSSTXGGGQHYQSQQTVGMMGQGNQGSSMMPQRPMGSYRAPQ
QGSAPQFMGQEEFYGEQYGHTQSSSEPVSQQFYSDGHGEYSYQQSSYGEQNYERSFDESS
QHYYEGNSQYSQQQTQYQQGSGQHQTLSQQQYPSQAAYSAQPQGYGPGQGSSSQYPQYQQ
GQSQQYPSYRSIQPGPAAQSQRPYSFEQGQYGNYQQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttacattttcatctgtccgtccgagggggaaagcagaggtcacccaacaaacc
attcagaagatgctggatgaaaaccatcatctgatacagtgcattatggactatcagagc
aaagggaaaacaactgaatgtacacagtatcagcagatattgcacagaaacttggtctac
ctagcaacaatagcagactctaatcagaatatgcagtctctgctaccagcgcctcccaac
cccaatataaacataggtccaggtgggatgagtcagggtggtggaggtcagtctcttcac
tctcaaactaatatgaatgatagtatgggcactggcttgccacccacctcactaatgcag
agccaaatgaacaatggccccagccacgcccccatgcagcagcagcccaccatatccatg
agcctgccccccagcagccatggcacggggcctgggtacagccactcggtgccctcctct
cagggagctccgctccaaggtcaggtggcctattcatctatggcctctcgtgccaacctc
aacatgcagtccagccaagtttctgtaatgcatcagcaaggcaccggaccccattactcg
tcgaccntcggcgggggtcaacactaccagagtcagcagactgttgggatgatgggacag
ggaaaccaggggagcagcatgatgccacagagacccatgggaagttatcgtgccccacag
caaggatcagccccgcagttcatgggccaggaggaattctacggagagcagtatggacac
actcagagctccagcgagcctgttagccaacagttttactcagatggtcatggagagtat
tcctatcagcagtcttcttatggggaacagaattatgagagatcctttgacgagtcctca
caacactactatgaaggaaactctcagtacagccaacagcagacacagtaccaacaaggc
tctgggcagcaccagacattaagtcaacagcagtacccatcacaagcagcctacagcgct
cagcctcagggatacggtccagggcagggcagctcatcccaatatcctcagtatcagcag
ggccagagtcagcagtacccatcataccgctctatacagccaggaccagctgctcaatct
caaagaccctactcttttgaacagggtcagtatggaaactatcagcaataa
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