Megalobrama amblycephala (Wuchang bream): 125260504
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Entry
125260504 CDS
T08212
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125260504 (trpc4a)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125260504 (trpc4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
CCDC71L
Motif
Other DBs
NCBI-GeneID:
125260504
NCBI-ProteinID:
XP_048034874
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All DBs
Position
LG2:complement(45874891..45896589)
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AA seq
967 aa
AA seq
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MIPTLIYQHLFIVCTGSLCFHLSQCPVVSHESIAAMSQLYFRRTENFSYRDRIPLRIVRA
ESELSPLEKAYLCAVEKGDYASVKQSLIEAEIYFKININCIDPLGRTALLIAIENENLEI
VELLLSFGVYVGDALLHAIRKEVVGAVELLLNHKKPSRGMQVPPILLDKQFSDFTPDITP
IILAAHTNNYEIIKMLVQKGVSVPQPHQVRCNCMECVSGSDVDSLRHSRSRLNIYRALAS
PSLIALSSEDPFLTAFQLSWELQELSKVENEFKSEYEELSQQCKQFAKDLLDQTRSSREL
ELILNYKDDVNLLEDEGNNDLARLKLAIKYHQKEFVAQPNCQQLLASRWYDEFPGWRRRH
WGSKFVTCMFIGILFPIFSLFYLIAPKSHYGLFIRKPFIKFICHTASYLTFLFLLLLASQ
HVDSNSNTTALTAMDVSRPTTTTVEWMILPWVLGFVWAEIKQMWDGGFQDYIHDWWNLMD
FVMNSLYLATISLKIVAHFKSNDNQCRKDWMMWHPTLVGEALFAIANIFSSLRLISLFTA
NSHLGPLQISLGRMLLDILKFLFIYCLVLLSFANGLNQLYFYYETNGTKTDNDVLCKGIR
CSVQNNAFTTMFETLQSLFWSIFGLVSLYVTNVEAEHEFTEFVGATMFGTYSIISLVVLL
NMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPPPFNIIPSPKSAWYLIRWI
KSHCFKVQQKRTETFGSLGIRAAENVRTNRQYQEVLRNLVKRYVAAMIRDAKKEEGLTEE
NFKELKQDISSFRYEVMGMMKGTKIGTSTSKGSTGASNLVHSDNPLKCNSASAGSQLKGK
MRLQSVTTSIIQEGTSKADAWKPGGFSGLEGGSVQNKTVSHQMNCKGPNNPGEIYSVSEE
ADESESEEQDDSEHGGNINCNAAKNKNKETERDRVKKTEEEDDEMSYMRKMCDEEMNETN
KYEGSRL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgattcctaccctcatttaccagcatctcttcattgtctgtactggctctctctgtttt
catctctctcaatgcccagttgtctcacatgaaagcatagcagcaatgtcacagctctac
tttcgcagaacggagaacttctcatacagggaccggatcccgctgcggatagttcgagcc
gagtcggagctgtcaccgctagagaaggcctacctgtgcgctgtggagaaaggcgactac
gccagcgtcaaacaatcactgatagaagccgagatttacttcaaaatcaacatcaattgc
atcgaccctctgggacggacggctttgttgattgccatagagaatgagaatctggaaatc
gtcgagttgctgctcagctttggcgtgtatgtgggggatgcgctcttacacgccatacga
aaggaggtggtgggggctgtggagttgcttttgaaccataaaaagcccagcaggggcatg
caggtgcctcctatcctgttggataaacagttctccgattttacccctgacataacgccc
attattttggctgcacacacaaacaactatgagatcatcaagatgctggttcagaagggg
gtgtccgtgccccagccccaccaggtgcgttgcaactgcatggaatgtgtgtccggctca
gatgtggacagcctgcgacattcccgatcccgtctcaacatctaccgggccctggccagt
ccctcgctcatcgccctctccagcgaggaccccttcctgacagcttttcagctcagctgg
gagctccaggagctcagcaaggtggagaatgaatttaagtcagagtacgaagagctttcc
cagcagtgcaagcagttcgccaaagatctgctcgaccaaacgcgcagctccagagagctc
gagttgattctgaactacaaggatgatgtgaatctcctggaggatgaagggaataatgat
ctcgccaggctgaaactggctatcaagtaccatcagaaagagtttgtagcacagccaaac
tgtcagcagctgctcgcatctcgctggtacgatgagttcccaggctggagacgccgccac
tggggcagcaagtttgtcacctgtatgttcatcggaatcctcttccctatcttttcgctg
ttctacttgatcgcccccaagagccattacggcctcttcatccgaaaacccttcatcaag
tttatatgccacactgcatcttatctgaccttcctctttctcctgctattggcctcccaa
catgtggactccaatagtaataccaccgctctcaccgctatggatgtctcaaggcccacc
actaccactgtggaatggatgatcctaccctgggttttaggctttgtatgggctgagatc
aaacaaatgtgggatggtggctttcaggattacattcatgactggtggaacctcatggac
tttgtcatgaattctctgtatctggccaccatctcattgaagattgtcgctcactttaag
tccaatgataatcagtgccggaaggattggatgatgtggcaccccaccttggtgggagag
gccttgttcgccattgctaacatatttagctccctacgactgatttcacttttcacagcc
aactcccacctgggccctcttcagatctcgcttggccgaatgctactggacatcctcaag
ttccttttcatttactgcctggtgctgctctcctttgcaaatggactcaatcaactgtat
ttttattatgaaaccaatggcacaaaaacagataatgacgtcttatgcaagggtatccgc
tgctcagtgcagaacaatgcattcaccactatgtttgagacgctgcagtcattgttctgg
tccatatttggtctcgtttccctttatgtgaccaatgttgaagccgaacacgagttcacc
gagtttgttggagccacaatgtttggaacctacagcataatctctctggtggtgcttctt
aatatgcttattgctatgatgaataattcctaccaacatattgctgaccatgctgatatt
gagtggaagtttgccagaacaaaactttggatgagctacttcgaagagggcggcacgctg
cctcctcccttcaacatcattccaagtccaaaatcagcgtggtacctcatcagatggatc
aagagccactgcttcaaagttcaacaaaaaagaacagagacatttggatcacttgggata
agagctgctgaaaacgtccgcacaaaccgccagtaccaggaggtactcagaaacctggtt
aagcggtatgtggcagcaatgatcagggatgccaaaaaagaagaggggttaacggaggag
aactttaaggaacttaaacaggacatctcaagcttccgttacgaggtgatgggaatgatg
aagggcactaagattggcacgtcgacctcaaaagggagcacaggagcctcaaacctagtg
cattctgataaccctctgaagtgcaattctgcttcagctggaagtcaactgaagggcaaa
atgagactgcagagtgtcaccacctctataatccaggagggcacatccaaggccgatgcc
tggaagcctggtggctttagcggcctagagggtggttctgtccaaaacaagactgttagc
catcaaatgaactgcaaagggccaaacaacccgggagagatatactccgtgtcagaggaa
gctgatgaatccgagagcgaagaacaggatgatagtgaacacggtggaaacatcaattgc
aatgcagcaaagaacaaaaacaaagaaacagagagggacagagtaaaaaaaactgaagaa
gaggacgatgaaatgtcatacatgcgtaaaatgtgtgacgaagaaatgaatgagacaaac
aaatatgaaggaagcagattataa
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