Megalobrama amblycephala (Wuchang bream): 125264865
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Entry
125264865 CDS
T08212
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04514
Cell adhesion molecule (CAM) interaction
mamb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125264865 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125264865 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125264865 (cdh5)
04090 CD molecules [BR:
mamb04090
]
125264865 (cdh5)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Major cadherins
125264865 (cdh5)
CD molecules [BR:
mamb04090
]
Proteins
125264865 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
DUF7318
PAP2_C
Motif
Other DBs
NCBI-GeneID:
125264865
NCBI-ProteinID:
XP_048040613
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All DBs
Position
LG3:23045889..23061647
Genome browser
AA seq
768 aa
AA seq
DB search
MMKLSAWRQMTEPGCWAGILVVLCTLSMGADVQKALKKPSMPSTVLQRHKRDWKWDKLYA
FEETPPKTPPEKIGKLENTHFSKSSRYILKGEGANDIFTVNDNGDILVNAKLDREKKSEY
RLSASIISIDNGRQEDKDDSFVIVVLDINDNSPVFPPNLSGSINESSTAGSIVMTVTATD
ADDPTTQNGEIEYKLLNGTDLFNINNKGEIRTSKSDLDREKQSQYLIAIQAKDLPGILSG
NSAATVVTININDINDNIATFKTGKYQFDVKEDSKPGFEIGILGVEDKDEIQNKDPSFTV
FDYDKVFGIKRSNEKDGILSLKVPLDYETKNKYIFSVNVDEHTVSKSPDNQGPALLKRAQ
VSINVIDVDEPPVFSQTEYQFIIYEGPFKTPVIGAVSAKDPDKTRHKIRYSIEDPNCPVA
VDSVQGHLSLKRQLDREQKSSYTFNVTAHEDIQNGLKSYAEVKLKVLDINDNAPELTNGS
NVYVCESDKRDTIIGTIGAHDKDENSGRFRFTLAKKSANFSLHDNQDNTASIVLKQGGFS
TEHTVEHVLEIEITDGGTPEQKSINLLQIKVCTCQSGRRIEYCMAYARAGMSVSALLAIL
LCIVTILVIVILIVLRRRYQKDVLVAKSSGEIHEQLVRYDEEGGGEMDTNGYDVSILTSA
CHDSSFRPAAGSSLYAMVKKPPACKGDMAMMIEVKKDEADHDRDGIPYDTLHIYGYEGSE
SLAGSLSSMDSSSSGSNLDYDFLNDWGPRFRTLAQLYGVDGSDTDSSY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaactgtctgcctggaggcagatgactgagcctggatgctgggcaggtatcctg
gtcgttttatgtaccctcagcatgggagctgatgtccagaaagctctgaaaaaaccatcc
atgccgagcacagtactccaaagacataagagggattggaaatgggataaactttatgca
tttgaggaaacacctccaaaaaccccacctgaaaaaattggaaagctagagaatacacat
ttctctaagtcctcaagatatattcttaaaggagaaggtgctaatgacatttttactgta
aacgacaatggggatattttggtcaatgcaaagctggatcgggagaagaaaagtgaatac
agactctcagcttcaataatcagcattgataacggaaggcaggaggacaaagatgattca
tttgtaatagtggtcttggatattaatgacaatagccctgtttttccacctaacctctct
ggatctatcaacgagtcctctacagcaggatcgatagtaatgacagtaactgcaactgat
gctgatgatcccactactcaaaatggagaaattgagtacaaactgctaaatgggacagac
ctcttcaacatcaacaataaaggtgaaatccgtacatcgaaaagcgaccttgaccgtgag
aaacagagtcagtacctaattgctatacaagccaaagatctgccaggaattttgtctggg
aattctgctgctactgttgtgaccatcaacattaatgatataaatgacaatattgccacc
ttcaagacaggaaaatatcaatttgatgtgaaagaagacagcaaacccggatttgaaatt
ggcattttaggggtggaggacaaagacgagatacaaaacaaagatccaagtttcactgta
tttgactatgataaagtgtttggcatcaaacgaagtaatgagaaagatggaattcttagc
ctcaaagtgcctctcgactatgaaacaaaaaacaaatacatttttagtgtaaatgtggat
gagcacacagtgtctaaatcaccagataaccaaggaccagccctgctgaagagagcccaa
gtttccatcaatgtaattgatgttgacgaaccacctgttttcagccaaactgaataccag
tttatcatctacgagggccccttcaagaccccggtcattggagcggtttcagcaaaggat
ccagataaaaccagacacaaaatacggtactctattgaagacccaaactgtcctgtagct
gtggattctgtacaaggacatctatccttgaagaggcaactggacagagagcaaaaatcc
tcatacacattcaatgttacagcacatgaggatatacaaaatggcctaaagtcctatgcc
gaggttaaacttaaggttcttgacattaatgacaatgcaccagaactaactaatgggagc
aatgtgtatgtttgtgaaagtgataaacgtgacacaatcattgggactattggtgcccac
gacaaggatgaaaattcaggcaggttccgtttcactctggcaaaaaaaagtgcaaacttt
tcccttcatgataaccaagataacactgcgagcattgtgctgaagcaaggaggtttcagt
acagagcacacagtggaacatgtgctcgaaatagaaatcactgatggaggtacaccagaa
cagaagagcattaaccttctccagatcaaagtgtgcacatgccagtcgggtcgaaggatt
gagtactgtatggcctacgcccgggccggaatgagcgtcagcgccctcttagccattctt
ctctgcatcgtcaccatcctggtcatcgtcatcctcattgtgttgcggaggcgctatcag
aaagatgttttggtcgccaagtcgtctggcgagatccacgagcagctcgtgagatatgac
gaagagggcggaggagagatggacacaaatggttatgacgtctccatcctgacctccgcc
tgtcacgacagcagttttcggcccgccgcggggtcttcgctttatgccatggtgaagaaa
ccccctgcttgtaagggtgacatggccatgatgatcgaagtgaagaaggatgaggcggat
catgaccgtgatgggattccctacgatactttacacatctacggctatgagggatctgaa
tccctggccggttctcttagctctatggactcgtcctccagtgggtccaatttggactac
gacttcttaaatgactggggacctcgtttcaggaccctggctcagctctatggagtagat
ggctctgataccgatagctcctactga
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