Megalobrama amblycephala (Wuchang bream): 125265358
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Entry
125265358 CDS
T08212
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04141
Protein processing in endoplasmic reticulum
mamb04210
Apoptosis
mamb04217
Necroptosis
mamb04218
Cellular senescence
mamb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125265358 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125265358 (capn1)
04217 Necroptosis
125265358 (capn1)
04218 Cellular senescence
125265358 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125265358 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125265358 (capn1)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125265358 (capn1)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C2: calpain family
125265358 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
LPD26
Motif
Other DBs
NCBI-GeneID:
125265358
NCBI-ProteinID:
XP_048041459
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All DBs
Position
LG3:complement(42141575..42174620)
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AA seq
704 aa
AA seq
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MEPIYATGMAAKLRSQWDRDAGLGQNHNAVKFLGQDYESLRAQCQHTRTLFEDPLFPASS
SSLGFNELGPRSSKTQGLRWKRPKEICMRPQFIVDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQNFDGGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGEE
FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYDLKKAPADLFSIIGRAVERG
SLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGVEEVVYRGNMTKLVRIRNPWGEVEWTG
AWSDDSREWENVDRSVRGRLQNRSDDGEFWMSFSDFLREFTRLEICNLTPDALQASQVKK
WSTSLYQGEWRRGSTAGGCRNYPATFWINPQFKVALKHTDSPGQSDCSFLVALMQKDRRK
KRKEGQDMETIGFAIYEVPNEYIGKSAVHLKRDFFLTHGSSARSELFINTREVSSRFRLP
AGEYIIIPSTFEPNKEADFVLRVFSEKPANSVEMDDKVTADIPEEQRLDESQIDASFKSL
FRQLAGPDMEISVTELQTILNRIISKHKDLKTDGFGKESCRSMINLMDTDGSGKLGLTEF
HVLWEKIKRYLQIFRDHDVDKSGTMSSYEMRKALEAAGFKLNNHLFQLIILRYTEEDLSV
DFDNFVTCLVRLETMFKTFNTLDTDADGVVSLTFFEWISLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttacgccactggaatggctgcaaagctccggagtcagtgggaccgggat
gcaggtttgggtcagaaccacaatgctgtgaagttcctgggacaagattacgaatcactg
agggcccaatgccaacacaccaggaccctgtttgaagaccctttgttcccagccagtagt
tcatctctaggcttcaatgagttgggtccacgatcctccaagacgcaggggttacgatgg
aagagaccgaaggagatttgcatgcgtccccagttcatcgtggatggagcgactcgtact
gacatctgtcagggagctctgggtgactgttggttgttggcggccatcgcgtctctgact
ctaaacgataacctcctgcaccgcgtggtgccgcacggacagaactttgatggcggttat
gctggaatcttccacttccagttctggcagttcggtgagtgggtggacgtggtgattgac
gaccgattgcctgtaaaagatgggaagctgttgttcgtgcactcagcggagggtgaagag
ttctggagcgctctgctggagaaggcctacgccaagctgaacggctgttatgaggctctg
tcaggtggcagcacgtccgaggggtttgaggatttcacaggtggggtcacagagatgtat
gatttaaaaaaagcacccgctgacctcttcagcatcatcggccgtgccgtcgagagaggc
tcgctgctgggctgctctatagacatcaccagtaaatttgacatggaggcagtgaccttt
aagaagctagtcaaaggtcacgcgtactcagtgactggagtggaagaggtggtctacagg
ggaaacatgactaaactggtgcgcatcaggaacccatggggtgaagtggagtggacagga
gcctggagtgacgactctcgggaatgggagaatgtggaccgctctgtccggggcagatta
cagaaccgcagtgatgacggagagttctggatgtcgttcagtgatttcttgcgtgagttc
acccgcttggagatctgtaacctgacgccagatgctctccaggcgagtcaggtgaagaag
tggagcacgtctctttatcagggcgagtggaggagaggcagtacagccggcggctgcagg
aactatccagccacattctggatcaaccctcagttcaaggtggccttaaaacatacggat
tctcccggccaatcagattgcagcttcctggtggcactgatgcagaaagaccgcaggaag
aagcgaaaagaaggacaggacatggagaccattggattcgccatttatgaggtgccaaat
gagtatataggtaagtcggccgtgcacctgaagcgggatttcttcctcactcacggatcc
agcgctcgctcggagctcttcatcaacacgcgggaggtgagctcacgcttccgtctgccg
gccggcgagtacatcatcataccctccaccttcgagccaaacaaagaggcagacttcgtg
ctcagagttttctcagagaaaccagccaactcggtagaaatggatgataaagtcacggct
gatattcctgaggagcaacgtctagatgagagtcagattgatgccagctttaagagtctc
ttcagacagctggctggaccggacatggaaatcagtgtgacggagctgcagaccatcctg
aacagaatcatcagcaaacataaagatttaaagacagacggcttcggtaaggaatcctgt
cggagtatgatcaacctcatggatacggacggcagcgggaagctcggactcacagagttc
cacgtgttgtgggaaaagattaaacgctacctgcaaatcttcagagaccatgatgtggat
aaatcaggcactatgagctcttatgagatgaggaaagccctggaagcagcaggttttaaa
ttgaacaaccatttattccagctgatcatcctgcggtatacagaggaagacctctctgtg
gatttcgacaactttgtcacctgtttagtgcgactggagaccatgttcaagaccttcaac
acattggacacagacgcagatggagtcgtgtcgctcacattctttgagtggatctctctg
accatgtttgcctaa
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