Megalobrama amblycephala (Wuchang bream): 125267494
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Entry
125267494 CDS
T08212
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125267494 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125267494 (ttc37)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
125267494 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_8
TPR_17
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
Fis1_TPR_C
TPR_MalT
HAT_PRP39_N
ARM_TT21_C
ARM_TT21_2nd
SHPRH_helical-1st
TPR_15
TPR_21
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
125267494
NCBI-ProteinID:
XP_048045136
LinkDB
All DBs
Position
LG4:complement(39144028..39169132)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKAELKNAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGVAATELQQPDQAQ
IAYRKASELEPEQLLAWQGLANLYEKSDQADFKAELPKIYQRLITLYETSDKAKCFEVSK
KLVEVYQSEKNYLQVARVWRRLIQMKEGVEGVEDSELLELWKEMTRLLQDTVEDQDNETQ
QHLISAFERALKMTVDVPSEAHRSLSQDYIKCLSKLPHEAAKLKEVCDATLSCYPTHSYP
LEALSEHYIKSGDCNEEAVCCFNRLSELDPNNSHAHFGLGIKACQDKKYEDAIKSIGLGL
KGMRSSIIGWYNLALAQLKMHKYSDSATSSSQGLKSSVGNSDDWTQKLQRLRLDALVRTG
RDQDADEALQMLAQISDAKNDPVLLALKGRAHLQKGQTEEAFQVSAELLSSHPGSVEGLT
LRGLTHVAKEQLKQAEESFLEALSRSPDDGELYFLLGRLYWNMGEEIRRDRSKAHTHLLK
AAKLDPYLGSVFRFLGHYYREVAKDQGRARGCYKRAFELDSSDAEAGAATVDLSMEQGDM
DSALTVLQSVTERATPGSAKWAWMRRGLYHLKIGQHQQAIADLQAALRADPQDWVCWECL
GEAYLNRRSFTAALKAFDKAHLLQPTSIYSLYQTAAIKQILGRFKEAASEYRQILEQEEY
VPALKGLGECLLALAKSALDDYLDGRAVDLIQNAIHYLFSAVKQRPDLSCLWKLLGDACT
TCRAVSTNRVKVLVPGALCGMDPPNQSHTLSQRQLLTVGERCFGHALKLMPEAPSLWCDL
GLNYYHQSRLLSCLFPEEDPQPLLEKALQCVKKAIMLDSANHTYWNALGVVAMAKGIENF
ALAQHSFIKSVKAESNNVVAWTNLGALYLKKGNIELSHEAFKIAQSLEPLYVNCWIGQAL
IAETVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCSTLLDRSNRDSELYLYNIVQMNAVS
AAQVALSKYTERIQTDPDAFIMLGYLNTHLQLRKQATVAYRRAVELLQASPHTDKLSFAL
RGYGRALSDDGQWEEAVRIFSSTSLEELHDLIGLALACFKIGRLPESIQAYEKALAVASS
EKEKACVLTALALIQHRLGSMDHAKTLLFKCSMLKEPIPESLQCLCALGLAHGDVTLASA
TLAELLKLGEPVGGAVEEYCLLTCTLLALKGNFSGVHREASRAIHRNPGNPSLWALLSRL
VPQYCPNKASGGAVAGSVACHASLTLGKRALLYSGVNQLASGRHSGEDRRRNALKTIQRA
VLLCPDDPAGWAGLMAACHTENTACLLSGSAPRREDLEKAHMTLVSEKVKGLHGEDGLLA
QALEGWVLQQAVTGLKQSGQYDQAETLCSQVLSVSPEHPVVFLMLRQVQCERLLQSEAGN
SVPPAVLDQLSAAVMANLTSVSAWHWLAEVYRSQGLLAQASVAYRQSLQLASQLGDHNGK
MSSLLRLALLALMPCLAGVCVSEWKDLVLEASAEVLKMGISPVALLFQALLQFSIKMGAR
ETRRLLERIVYASASGSSETIASVARWYLLRHLHAKDDLELIDTLLLKATAAGDSRLVDF
HRRLYPSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaaagctgagctgaaaaatgcaagagaagccattaaaaataaa
gagtttaaagaagctttgaaacattgtaaggctgttctcaagcttgagaagaataactat
aatgcttgggtgttcattggagtggcagccacagagctgcagcagccggatcaggcacag
atcgcctacagaaaggcctctgaactggagccagagcaactgctggcatggcagggttta
gcaaatctgtacgaaaaaagtgaccaagcagatttcaaagctgaactgccaaagatttac
cagagacttattacactgtatgaaacctcagacaaagcaaaatgtttcgaagtgagcaag
aagttggtggaagtctatcagtcggagaagaactatttacaggtggccagagtgtggcgg
aggttaatccagatgaaggagggagtggaaggggtggaggattcagagctgctggagctg
tggaaggagatgaccagactcctgcaggacactgttgaggatcaggacaatgagactcag
cagcacctgatatcagcatttgaaagagctttgaaaatgacagtagatgtgcccagtgaa
gcccacaggagcctctcacaggattacattaaatgtctttctaagcttcctcatgaggcg
gccaagctaaaagaggtttgtgatgctacgctgtcctgctatccaacacactcctaccct
ctagaggccctcagtgagcactacatcaaatcaggtgactgcaatgaagaagctgtctgt
tgtttcaaccgtctctcagaactggatcctaacaactcacacgctcactttggtcttggt
attaaagcttgtcaggataaaaaatatgaggatgccatcaaaagtattggtctgggactg
aaagggatgcgctcgtccatcatcgggtggtataatctggctctggctcaactaaaaatg
cataaatactctgacagtgccacatcttccagccaaggcctgaagtcgagtgtggggaac
tctgatgattggactcaaaagctgcagaggttgagactagatgccctggtgaggactgga
agagaccaggatgctgatgaagctctgcagatgcttgcacagatttcagatgccaaaaat
gacccagtgcttttagcattaaagggaagagctcacttgcaaaaaggccaaactgaggaa
gcatttcaggtttcagctgagctgctaagctctcatccaggatctgtggagggtctcact
ctgagggggctgacgcatgttgctaaagaacagctcaaacaagctgaggagagctttctg
gaggctttatccagaagcccagatgatggggagttatacttcttgctggggcgcctgtac
tggaacatgggagaggaaatacgcagggaccgtagcaaagcccatacacacttgctcaag
gctgctaaactggacccgtatcttggttcagtgtttcgtttcctgggtcattactacaga
gaggtggcaaaggatcagggcagagccagaggctgctataagagagcatttgagctggat
tcctctgatgcagaggctggagcggctactgtagacctcagcatggagcagggagacatg
gactcagctctgactgttctgcagtctgtgacagagagagccactcctggctctgctaaa
tgggcctggatgaggagaggtctctaccacctcaagattggccagcaccaacaggccatt
gcagatctgcaggcggcgttaagggctgatcctcaggactgggtgtgctgggaatgttta
ggtgaggcttatctgaaccgcaggagtttcacagctgctctgaaagcctttgataaagca
catctacttcagcccacctccatctacagcctctatcagacggccgccatcaaacagatc
ctggggcggtttaaagaggctgcctcagagtacaggcagatcttagagcaggaggaatat
gtgccggcattgaaaggtctgggtgaatgcttgttagccttggctaaaagtgcactggat
gactatcttgatggaagagctgtagatttgatacagaatgccatccattacctcttcagt
gctgtaaagcaaagaccagacctgtcatgtctatggaagttacttggtgatgcctgcacc
acttgcagagctgtgtccacgaaccgagtcaaagtgctggttcctggagctctatgtgga
atggatccacccaatcagagccatacactgagccagagacagctcctcactgtaggagaa
aggtgctttggtcatgctttgaaactgatgccggaggcccccagtctgtggtgtgacctc
ggcctgaactattaccaccaatccagactgctcagctgcctgtttcctgaggaggatccc
cagcctctgctggagaaagccttgcagtgtgtgaagaaggcgatcatgctggacagtgct
aatcacacatactggaacgccctcggtgtcgtcgccatggcaaagggaatagaaaacttt
gcacttgcacaacacagtttcatcaaatcagtaaaagctgagtcaaataatgtggttgca
tggactaaccttggtgctttgtatctgaagaagggaaatatagagctctctcatgaagct
ttcaagattgctcagtctctagagcccctctatgtgaactgctggatcggacaggccctt
attgctgagaccgttggcagttatgacaccatggaccttttcagacacaccacagaactg
agcactcatactgagggagtgaagggttacgcgtactgggtttgctccacgctgctggac
aggagcaacagagactcagagctctacctctacaacatagtccagatgaacgccgtctct
gctgcccaggtggctctgagcaagtacactgagaggattcaaaccgaccctgacgccttc
atcatgctcggatacctgaacacacacctgcagctgaggaaacaggccactgtggcatat
cgcagagctgtcgagttgcttcaggcatctcctcacacagacaagctcagctttgctctg
aggggttacggacgtgccctcagtgatgatggacagtgggaagaagcagtgcgtattttt
tcttccacatcactagaagagctgcatgatctcatcggtctggcgctcgcctgtttcaaa
atcggtcgcctgccagagagcattcaggcctatgagaaagcccttgcagttgcctctagt
gagaaggaaaaggcctgtgtactcactgcactggccctgatacagcacaggctgggcagc
atggatcatgccaaaacacttctcttcaagtgctccatgcttaaagagcccatcccagag
agcctgcagtgtctctgtgctctgggtttggctcatggggacgtgaccctggcaagtgct
acactcgccgagctgctgaaactgggggaacctgtaggaggcgctgtggaggagtactgt
ctgctcacttgcaccctgctggccctgaagggcaactttagcggtgtacatagagaggct
tctagggctatacacaggaacccagggaatccatctctctgggctcttctctccagactg
gtgccacagtactgccccaacaaagccagtggaggcgctgtggccggcagtgtggcatgt
catgccagcttgacacttggaaagagggcgttgctgtacagtggagtgaatcagttggcc
tcaggccgccactctggtgaggacagaagacgcaatgctctgaaaacaatccagagagct
gtgctgctgtgcccagatgatcctgctggatgggcggggctaatggccgcctgtcacaca
gagaacacggcatgcttactctcaggctccgcccctcgcagagaagatcttgagaaggcg
cacatgaccctggtgtctgaaaaagtgaagggcctgcatggagaggacgggctcttggct
caggctctggagggctgggtgctgcagcaggccgtgactggactcaaacagagtggccaa
tatgaccaggcagaaactctttgctcccaggttcttagtgtctctccagagcatcctgtg
gtgttcctgatgttgaggcaggttcagtgtgagcgcctcctgcagtctgaggccggtaac
tctgttcctcctgctgtgctggatcagctcagtgctgccgtcatggccaacctcacatct
gtgtccgcctggcattggttggcagaagtttaccgctctcagggtctgctggctcaggcc
tctgtggcttatagacagagtcttcagctggcatctcagctgggagatcacaacggaaag
atgagcagcctgctccgactagccctgctggcgctcatgccatgtttggctggtgtctgt
gtctctgagtggaaggatctggtgttggaggccagcgctgaagtcttaaaaatgggcatc
tcaccagtagctctgctcttccaagccttactgcagttctccataaaaatgggcgccagg
gagacccgtcgcctgttggagaggattgtttatgcttcagcctcaggcagctctgaaaca
atagcatcagtggcacgttggtacctcctgcgccacctgcacgccaaagatgacctggag
ctgattgataccctgttgttgaaggctacagcagccggagacagcagactggtggatttc
cacagacgcctctacccatccagctga
DBGET
integrated database retrieval system
