Mycteria americana (wood stork): 142410520
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Entry
142410520 CDS
T11228
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame02010
ABC transporters
mame04146
Peroxisome
mame04977
Vitamin digestion and absorption
mame04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
142410520 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142410520 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
142410520 (ABCD4)
04980 Cobalamin transport and metabolism
142410520 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mame04131
]
142410520 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mame02000
]
142410520 (ABCD4)
Enzymes [BR:
mame01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
142410520 (ABCD4)
Membrane trafficking [BR:
mame04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
142410520 (ABCD4)
Transporters [BR:
mame02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
142410520 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
SbmA_BacA
AAA_7
AAA_22
DUF6079_1st
nSTAND1
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
142410520
NCBI-ProteinID:
XP_075359344
LinkDB
All DBs
Position
5:complement(47574461..47590623)
Genome browser
AA seq
620 aa
AA seq
DB search
MAGGSAGAGGAGAGGRPAPRLDGLFLRRFLRLQAVLFPGWPSPGVLMFLTLLGVALLEQL
VVYQVGIIPSQYYEVLGNKDFSGFQTLTAVALTLIVVNSMLKSFDQFICNMMYVSWRKSL
TEYLHSCYFQGQVYYSLHVLRKDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYT
YQCFHSTGWLGPVSIFGYFMIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEP
AAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFS
GVYSDLSPTELSALVSKNAFVSIYLISCFSQLIDVSSTVTDVAGYTHRIGELQETLLSLG
RKKNGNYSEAKASWDLDGSRSGEDPVPRDTAFLLERVTLSVPSSGKLLIKDLSLRISQGN
SVMIVGNTGTGKTSLLRVLGGLWESTLGSIEMLTCFGPRGVVFLPQRPFFTDGSLREQVI
YPLKEIYPVSGSADDERIVRFLELAGLTDLLVRAGGLDKQVDWNWYDILSPGEMQRLSFA
RLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLHGE
GRWELTRCDKMKRLPAGEGC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcagcgccggggcggggggcgccggggccggcggccggcctgccccgcgg
ctggacgggctgttcctgcggcgcttcctgcggctgcaggccgtcctcttccccgggtgg
ccctccccgggcgtcctgatgttcctgacgctgctcggcgtcgccttgctggagcagctg
gttgtttaccaggtcggcatcatccccagccagtactacgaggtcctagggaacaaggac
ttctccgggttccaaacgctgactgctgttgccctgactctgattgtggtgaactccatg
ctaaaaagcttcgaccagtttatctgcaacatgatgtacgtgagctggaggaagtccctc
accgaatacctccacagctgctacttccagggccaggtctactacagcctgcatgtgctg
cgcaaggacatcgataacccggaccagcgcatcagccaggatgtggagaggttctgcagg
cagctcagctccatggccagcaagctcatcatctcgcccttcacgctggcctactacacg
taccagtgcttccacagcacaggctggctaggcccggtgagcatctttgggtatttcatg
attgggacaatcgtcaacaaggtattgatgagcccaattgtgtctaaacttgtgcagcag
gaaaaactggagggagatttcaggttcaagcacatgcagatccgtgtcaatgcagaacca
gctgctttctacagggccggtcgagtggagcacatgcgcacggaccggaggctgcagagc
ctgctgcagacccagagggagctgataggcaaggagctgtggctatacattgggatcaac
acctttgactacctgggcagcatcctgagctacgtggtcattgccattcccatcttttct
ggggtctacagtgacctgagtccaacagaactcagtgccctcgtcagcaagaatgccttt
gtttccatctacctcatcagctgcttcagccagctcatagatgtctccagcaccgtgacc
gatgtagctggttacacgcacaggattggtgaactgcaggagaccttgctgagccttggc
agaaagaaaaatggtaactactcagaagccaaagccagctgggatttggatggcagccgt
tctggagaggacccagtgccaagggacacagctttccttctggaacgagtgacgctctcg
gtgccatcctctggcaagctgctcatcaaggacttgagcctcaggatctcacaaggaaac
agtgtgatgattgtggggaacactggcacagggaagacatctctcctgagggtccttggg
ggactctgggagagcacactggggagcattgagatgctgacctgctttggcccccgggga
gtggtgttcctgccgcagcggcccttcttcaccgacggaagcctgcgtgagcaggtgatc
tatcccctgaaggagatctatccagtttcagggtctgcagatgacgagagaattgtgcga
ttcctggagctggctgggctgactgatttgctggtgagggctggaggactggacaagcag
gtggactggaactggtatgacatcctgtccccaggggagatgcagaggctctcgtttgcg
cggctcttctacctccagccaaaatatgcggtgctagatgaagccaccagcgccctgaca
gaagaggtggagcatgaactgtaccgtgtgtgccttcagctgggcatgacgctaatcagc
gtgggacacagggccagcctggaaaagttccatagctggattttgaaacttcatggggag
ggaagatgggagctcacccgatgcgataagatgaagcggctcccagctggggaaggatgc
tga
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