Mycteria americana (wood stork): 142413832
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Entry
142413832 CDS
T11228
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mame Mycteria americana (wood stork)
Pathway
mame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142413832 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142413832 (CNOT1)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142413832 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
142413832 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
142413832
NCBI-ProteinID:
XP_075366519
LinkDB
All DBs
Position
8:complement(27735522..27796372)
Genome browser
AA seq
2384 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNM
QQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYR
AQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVG
VLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatctatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgtcct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtaccagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcggggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccatccgggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagtttttccagtgaatgccatatacaggccttggaaa
cacgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgattg
gcggaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacactcatgccaatattccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcgaaattgtcgcgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttcttg
aagagaagatgtccatctatcctgggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcgtgtctgcaagcttgtgctggg
agtgtttctcaggagctctcagagacgatactcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagccaccacctggagtcatgccgaaaggacgcccacccagtgct
agcagcttggatgccatctctcctgtacagatcgactcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcgttcccccctctttccacccaa
aaccagacaacaggtttcagcggcattggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctaactggcataggaaccggagccctgggccttcctgcggtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catccgaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtctttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggtcacttacatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcatcacttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaagacgtgccgccttccattaatactaccaacattgatacattgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaagagagtcagt
attgagcctaattttcacagcttatattcaaacttccttgacacacttaagaatccagag
tttaataaaatggttctgaatgaaacatacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgtta
ctactggaagcatacgttaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagttttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccgtggacaatg
gccattatgaatgttttagctgagctacatcaagaacacgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcgctagacatcaatgagctgaaacctgga
agtctcttgaaagataaggatcgtctgaaaaatttggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgcacagccacggttcctccgcagccccagtacagttatcac
gacatcaatgtctattctttaggagggctggctccacatattactttaaatccaacgatt
ccgctgtttcaagcccacccacagttgaagcagtgtgtgcggcaggcgatagagcgagcg
gtgcaagaacttgtccatccggtggtcgatcggtccattaagattgccatgactacttgt
gagcagatagtcaggaaggactttgcactggattcagaggagtcacgaatgcgtgtggct
gcacaccatatgatgcggaacctgactgctgggatggccatgataacctgcagggaacct
ttgctgatgagcatagctaccaacttgaaaaatagttttgctactgcactgagggcagcc
tccccacaacagcgggaaatgatggagcaagcagctgcccagttagcgcaggataactgt
gaactagcatgctgctttatccagaagacagctgtggaaaaggcaggccctgagatggac
aagaggcttgcaactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgttgtattaacttaccaggctgagcggatgccagaacagatcaggttaaag
gttggaggtgtggacccgaaacagctggctgtttatgaagagtttgcacgaaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
cagcaagcttgggctacagatgatgtagcacaaatctatgacaaatgtatgacagaactg
gagcagcacttgcagtccattccacacaccctggccatgaatcctcaagctcaagcattg
cgcagcctcttggaggctgtggtagtggctcggaactcccgtgatgctattgctgcactt
ggactactgcagaaggctgtagagggcttactggatgccaccagcggggcagatgctgac
ctcctgcttcgctatcgtgagtgtcatctgcttgtgctgaaagctctgcaggatggccgc
gcatatggatctccgtggtgtaataaacaaattactaggtgcctgattgaatgcagagat
gagtacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgttaacatg
cagcagtatgaccttcacttggctcagtcaatggagaatggcttgaactacatggctgtg
gcatttgccatgcagttggtaaagatcctgttggtggatgagagaagtgttgcccatgta
acagaggcagatctgtttcacacaattgagacgctcatgaggattaatgctcattccaga
ggaaatgccccggaaggattaccccagctgatggaagtggtccgatcaaactatgaagca
atgattgaccgtgctcatggaggtcccaatttcatgatgcattcaggaatttcccaagcc
tctgagtatgatgatccaccaggtctgagggaaaaggcagaatacctgctgagggagtgg
gtgaacctctaccattcagctgcagcgggccgtgacagtaccaaagcattctctgcgttt
gttggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaacagat
gacctgatcacccgctttttccgtctttgcaccgaaatgtgtgttgaaatcagctatcgt
gctcaggctgagcaacagcataatcctgctgccaaccccactatgattcgagccaagtgc
taccacaatctggatgcctttgtgcgacttattgcactgctagtgaagcactctggggag
gcaaccaacacagttacaaagatcaacctcctgaataaggttctcggtattgtggtggga
gttcttctgcaagaccatgatgttcggcagagtgagtttcagcagcttccttaccatcgc
attttcatcatgttgctgttggaattaaatgctcctgagcatgtgctggagaccatcaac
ttccagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctcca
ggttttgtttatgcctggctggaactgatctcccatcggatatttattgcaagaatgctg
gcacatacaccacagcagaagggttggcctatgtatgcccagttactgattgatcttttc
aagtacttggctcctttccttagaaatgtggaactcaccaaacctatgcaaattctttac
aagggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaatttctttgtgac
taccactatgggttctgtgatgtgatcccacctaactgtattcagctaaggaatctgatc
ctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaatctaaaggta
gacatgttaagtgagattaatattgctcctcgaatactcacgaatttcactggagtgatg
ccacctcagttcaagaaagacttggattcctatctcaaaacccgttctccagtcactttt
ttgtctgacttgcgcagcaacctacaagtatcaaatgaacctggcaaccgctacaacatc
cagttgattaatgcactggtgctctacgtaggtactcaagctattgcgcacattcacaac
aagggcagcacaccctctatgagcaccattacccactcagctcacatggacatcttccag
aatttggcagtagacctggacactgaaggccggtaccttttcttgaacgcaattgccaat
cagctgcgatatcccaacagtcacacccactacttcagttgcaccatgctgtacctgttt
gcagaggccaacactgaggctatccaggagcagatcactagggttctcttggaacgactg
attgtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaat
ccagcatttaagttctggaaccatgagtttgttcactgtgctccagaaattgagaagttg
ttccagtcagttgcgcagtgctgcatgggacagaagcaggcccagcaagtaatggaaggg
actggtgccagttag
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integrated database retrieval system
