Mycteria americana (wood stork): 142419351
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Entry
142419351 CDS
T11228
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
mame Mycteria americana (wood stork)
Pathway
mame04510
Focal adhesion
mame04512
ECM-receptor interaction
mame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142419351 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142419351 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142419351 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mame00535
]
142419351 (COL9A2)
Proteoglycans [BR:
mame00535
]
Extracellular matrix (ECM) proteoglycans
Others
142419351 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
142419351
NCBI-ProteinID:
XP_075378377
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Position
21:complement(2532676..2547809)
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AA seq
725 aa
AA seq
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MSPLLLRCPAERSGLLPYLSAARRSHRRSVPAALAMAGCFPVLQLWLLLQAACLCLAQIR
GPPGEPGPRGPPGPPGVPGADGIDGDKGSVGAPGSPGAKGEPGAPGPDGPPGKTGIDGLT
GAKGEPGPVGGPGLKGQPGLPGPPGLPGPSLPGPPGLPGQVGLPGEIGALGPKGDPGPDG
PRGPPGPPGKPGPPGHIQGLEGSADFLCPTSCPPGPKGPQGLQGLKGHRGRPGALGEPGR
QGRQGPKGDVGVSGEQGVPGPPGPQGLRGYPGMAGPKGETGPAGYKGMVGTIGAAGRPGR
EGPKGPPGDPGEKGELGGRGIRGPQGDIGPKGENGLPGIDGKDGTPGIPGVKGGVGQAGR
PGTPGHRGQAGLPGQPGSKGGPGDKGEAGARGQPGVTGAPGQIGEPGPRGEQGPQGVPGM
KGDRGERGLVGPPGEQGKAGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPEGGTGDPGV
HGLAGLKGEKGESGEPGPKGQQGIQGELGFPGPSGDAGAPGVRGYPGPPGPRGLVGERGV
PGMPGQRGVAGRDAGDQHIVDVVLKMLQEQLAEVAVSAKRAALGGVGAMGPPGPPGPPGP
PGEQGPHGPMGPRGVPGILGAAGQIGNIGPKGKRGEKGERGEAGRGHPGMPGPPGIPGLP
GIPGHALDGKAGERGLPGSPGEAGRPGLPGPAGLPGFCEPAACLGASAYAAARLTEPGAV
KGPVY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctcctcctccggtgtccggctgagcgctcggggctgctgccatacctgagc
gcagcgagacgaagccaccgccgctcggtgccggccgccctcgccatggccggctgcttc
cccgttctccagctctggctcttgctccaagccgcctgcctctgcctggcccagattcga
gggccaccaggagagcctggcccacgagggccccccggtcccccaggagtgccgggagca
gatggcattgacggtgacaaaggctctgttggagcccccgggtccccgggtgccaagggg
gagcccggagcccccggtccagatgggcccccagggaagacgggcatcgacggcctgacg
ggagcgaaaggggagccagggcccgtcggtgggccaggacttaaaggccagcccggactc
ccagggccgccggggctccctggcccttcgctgccaggaccacccgggcttccaggccag
gttgggcttcctggagagattggagcgctgggacccaagggtgaccctggacccgacggc
ccgcggggtcccccaggccctccagggaaacccggccccccaggacacatccaaggactg
gaaggcagcgctgatttcttgtgcccgaccagctgcccgccaggtcccaagggcccccag
ggactgcagggactgaagggacacaggggccgccccggcgccctcggcgagcccggcagg
cagggcaggcagggccccaagggtgacgtcggcgtctccggagaacaaggcgtcccaggc
cctccgggaccgcagggcctgaggggttaccccgggatggcgggacccaagggcgagacg
ggtcctgctggttacaaggggatggtcgggaccatcggagcggccgggcggccgggcagg
gaaggccccaagggaccacctggggaccccggagagaaaggagagctgggtggccgtggc
atcaggggcccccaaggagacatcggccccaagggggagaatggtctcccgggcatcgat
ggcaaagacggcaccccgggtatcccaggcgtgaagggcggcgtgggacaggccggccgc
ccaggaacgccaggacaccggggacaagctggcttgccgggccagccgggaagcaaaggg
ggcccaggagacaagggcgaagcgggtgctcggggccagcccggtgtcaccggtgcccca
gggcagatcggtgagcctggacctcggggtgagcagggaccccagggtgtccccgggatg
aagggcgaccggggcgagcgcggcctcgtgggcccccccggcgagcaggggaaagcgggg
cccaagggtgagcagggtccgccggggatcccaggaccccaaggcttgccaggagtcaaa
ggagacaagggctccccagggaaaaccggccccgaaggtggtactggagacccgggcgtc
cacggcctcgcggggctgaagggagagaagggtgaatcgggtgagccggggccaaaggga
cagcaaggcatccagggcgagctcggcttccccggcccctcgggggacgcaggcgcaccc
ggcgtgcgaggctacccgggaccccccggcccacgaggactcgtcggggagcgcggcgtg
ccggggatgcccggccagcggggtgtagcgggccgggacgctggggaccagcacatcgtc
gacgtggtcctgaagatgctgcaagagcagctggcggaggtggcggtcagcgccaagaga
gcagccctgggtggagtcggtgccatgggaccccccggaccccccggtcccccagggcca
cccggtgagcagggcccgcatggacccatgggacctcgaggcgtccccggcatcctgggt
gctgccgggcagatcggcaacataggacctaaaggaaaacgaggcgagaagggtgagcgg
ggagaagctggccgcggccacccgggcatgccgggtcccccggggatcccaggtctcccc
ggcatccccggccacgcgcttgacggcaaggctggggagcggggcctgccaggctccccg
ggagaggctggccggccgggcttgcctggtcccgctggcctgccggggttttgcgagccg
gctgcctgcctgggagcctcggcgtacgctgccgcgcgcctgacggagccgggggctgtc
aagggacctgtctactga
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