Massilia antarctica: IV454_06510
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Entry
IV454_06510 CDS
T08186
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
manc
Massilia antarctica
Pathway
manc03030
DNA replication
manc03430
Mismatch repair
manc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IV454_06510 (ssb)
03430 Mismatch repair
IV454_06510 (ssb)
03440 Homologous recombination
IV454_06510 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manc03032
]
IV454_06510 (ssb)
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_06510 (ssb)
03029 Mitochondrial biogenesis [BR:
manc03029
]
IV454_06510 (ssb)
DNA replication proteins [BR:
manc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IV454_06510 (ssb)
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
IV454_06510 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
IV454_06510 (ssb)
Mitochondrial biogenesis [BR:
manc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
IV454_06510 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
RhlB
DUF5342
Motif
Other DBs
NCBI-ProteinID:
QPI51178
LinkDB
All DBs
Position
complement(1438148..1438654)
Genome browser
AA seq
168 aa
AA seq
DB search
MASVNKVIIVGNLGRDPEIRYMPSGDAIANIAVATSYKSKDRNTGEQKELTEWHRISFFG
RLAEIVGQYLKKGSSVYVEGRLQTRKYTDKDGVEKYATEIVAEQMQMLGGRQGMGGDAVG
GMDDGGGYDSQPQQSRPAPQRQAPPAPAARPAPKPAPNFSDMDDDIPF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtcaataaagtcatcatcgtcggcaacttggggcgcgatccggaaatccgc
tacatgcccagcggtgacgccatcgccaacatcgccgtcgcgacctcgtacaaatcgaag
gaccgcaacaccggcgagcaaaaagagctgaccgaatggcaccgcatctcgttcttcggc
cgcctcgctgaaatcgtcggccaatacctgaaaaagggttcctcggtctacgtcgaaggt
cgcctgcagacccgtaaatacaccgacaaggatggcgtcgagaagtacgcgaccgaaatc
gtggccgaacagatgcagatgctgggcggacgccagggcatgggcggcgacgccgtcggc
ggcatggacgatggcggcggctacgattcgcagccgcagcagagccgtccggcgccacag
cgccaggcgccacccgcgcccgcggcacgtccggcaccgaagccggcgccgaatttctcg
gacatggacgacgatattccgttctaa
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