Mangrovimonas sp. YM274: RBH95_12485
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Entry
RBH95_12485 CDS
T09317
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang02024
Quorum sensing
mang03060
Protein export
mang03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RBH95_12485 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RBH95_12485 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBH95_12485 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mang02044
]
RBH95_12485 (ffh)
Enzymes [BR:
mang01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RBH95_12485 (ffh)
Secretion system [BR:
mang02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RBH95_12485 (ffh)
Eukaryotic Sec-SRP protein
RBH95_12485 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
AAA_22
CbiA
nSTAND3
CLP1_P
AAA_33
APS_kinase
AAA_24
KAP_NTPase
KTI12
6PF2K
ATPase
AAA_17
AAA_16
NPHP3_N
TsaE
NACHT
DO-GTPase1
ATP_bind_1
AAA_18
AAA_31
Thymidylate_kin
Pfg27
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WMI67956
LinkDB
All DBs
Position
complement(2894021..2895349)
Genome browser
AA seq
442 aa
AA seq
DB search
MFNNLSEKLDKALHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKEFTNRVKEKAL
GQDVLTSLQPGQLMVKLVKDELTELMGGDAEGINLSGNPSVILMSGLQGSGKTTFSGKLA
NYLKNKKTKRPLLVACDVYRPAAIDQLHVVGEQINVEVYSDKGNPDPVAIAQAGIAHAKA
NGFNVVIIDTAGRLAVDEAMMTEISNIHNAIQPQETLFVVDSMTGQDAVNTAKAFNDVLN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVV
SLVERAQEQFDEQEARKLQKKIAKNQFGFDDFLKQIQQIKKMGNMKDLIGMIPGAGKMMK
DIDIDDDAFKGIEAIIHSMTPEERSNPSIINASRKKRIGKGSGTSVQEVNQLLKQFNQMS
KMMKMMQGGGGKRMMQAMKNMR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatttaagtgaaaagttagataaagccttacacgttcttaaggggcatgga
agtattaccgaagtaaatgttgctgaaaccctaaaggaagtaagacgtgctttgttagat
gccgatgttaactttaaaattgccaaagaatttaccaatagggtaaaagaaaaagctctt
ggccaagatgttttaacgtctttacaaccagggcaattaatggtaaaattggtcaaggat
gaattgaccgagttaatgggaggtgatgccgaaggaattaacctatctggaaacccaagc
gttattttgatgtctggtctacaggggtctggtaaaactaccttttcaggaaaattagca
aattaccttaaaaacaagaaaaccaagcgtccgttattggttgcctgtgatgtctaccgt
ccagcggcgattgatcagttgcacgtagtaggggagcagattaatgttgaggtttatagc
gacaagggaaatcctgatccggttgctattgctcaagccggtattgcccatgcaaaagcc
aacggatttaatgtggtaattatcgataccgcgggtcgtttggctgtagatgaggccatg
atgaccgaaatatcaaacatccataatgctatccagccacaagaaacattgtttgtggta
gattccatgactggtcaagatgcggtgaacacggcaaaagcctttaacgatgtattgaac
ttcgatggtgttatccttactaaattagacggggatactcgtggtggagctgctatttca
attaagtctgttgtaaataaaccaatcaagtttattggtacaggtgagaaaatggaagcg
atagacgtgttctatccttcacgtatggccgaccgtattttggggatgggagacgttgtg
tccttagttgaacgtgcgcaagagcagtttgatgagcaggaagcacgtaaacttcaaaag
aaaattgcaaagaaccagttcgggtttgatgatttcctaaagcagattcaacaaatcaag
aaaatgggtaatatgaaggaccttatcgggatgattcctggtgcaggtaaaatgatgaag
gatatagatatcgatgatgatgcctttaaaggaattgaagcgataatccattctatgact
ccagaagagcgttctaacccttcaattatcaatgccagtcgtaaaaaacgtataggtaaa
ggttcaggaacatcggttcaagaggttaatcaattgctgaagcaatttaaccaaatgagc
aaaatgatgaagatgatgcaaggtggcggcggtaaacgcatgatgcaggccatgaagaat
atgagataa
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