Macrococcus animalis: ACMGE9_07260
Help
Entry
ACMGE9_07260 CDS
T11257
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
manm Macrococcus animalis
Pathway
manm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
manm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMGE9_07260 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manm03021
]
ACMGE9_07260 (rpoB)
03400 DNA repair and recombination proteins [BR:
manm03400
]
ACMGE9_07260 (rpoB)
Enzymes [BR:
manm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMGE9_07260 (rpoB)
Transcription machinery [BR:
manm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMGE9_07260 (rpoB)
DNA repair and recombination proteins [BR:
manm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMGE9_07260 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XNZ52393
LinkDB
All DBs
Position
1385790..1389332
Genome browser
AA seq
1180 aa
AA seq
DB search
MTGQLIQYGRHRQRRSYARISEILELPNLIEIQTKSYEWFLEEGLIEMFRDISPIEDFTG
NLSLEFVDYKLGEPKYDLDEAKNRDATYSAPLRVKVRLIIKETGEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNDKVDKNGKVSFGATVIPNRGAWLEYETDAKDVV
FVRIDRTRKLPITVLLRALGFSSDQEIIDLLGDNEYLRNALDKDNTESTEAALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKMNKKLHLKHRLFNQTLAEPIVDVETG
EIVAEEGTLLDRRNLDQILDVLENNANQKVFTLENGLLDEPIEIQSVKVYVPGDEEKRTT
TIIGNAFPDDEVKCITPADILSSVSYFFNLLAGVGFTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSLQDTESVTPQQLINIRPVIASVKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDIETNTVTSQIDYLTADEEDAYVVAQANSRLDDNGKFMDDEVVCRFRGDNT
VMARERMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTG
MEHVAARDSGAAVVAKYKGRVEHVEARQIKVRRIVEEGGKEIETDLDIYKLAKFARSNSG
TCYNQRPIVEAGNIVTKGEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSDNALKNLDDRGIIFIGAEVRDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGADGIVLDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISRILPEEDMPFMPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAAKNLGLHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGR
TGEPFDNRVSVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENIPRPGVPESFRVLMKELQSLGLD
VKVMDNKDEEIEMRDLEDDDFIDSKINIAKKPEPEAEITE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaacttatccaatacggaaggcatcgtcagcgtagaagttacgcaagaatt
tccgagattttagaattacctaacttaatagaaattcaaacaaaatcttatgaatggttc
ttagaagaaggtttaattgaaatgtttagagacatttctccaattgaagacttcactgga
aacctttctttagagtttgttgattacaaattaggtgagccaaagtacgatttagatgaa
gcaaagaaccgtgatgctacttactcagcgccacttcgagtaaaggttcgattaattatt
aaagaaacaggtgaagtgaaagaacaagaagtctttatgggtgatttcccattaatgacg
gatacaggcacgtttgttatcaatggtgcagaacgtgttattgtatctcagttagttcgt
tcaccatctgtatactttaatgataaagtcgataagaatggtaaagtgagctttggagcg
actgttatccctaaccgtggtgcgtggcttgaatatgaaactgatgcgaaagatgttgta
tttgttcgtattgatcgtacacgtaagttaccgattactgtacttttacgtgcgttagga
ttttcaagtgatcaagaaatcatcgatttattaggtgacaatgagtacttacgaaacgca
ttagataaagataatactgagtcaactgaagctgcattacttgaaatatatgaacgttta
cgtccgggtgaaccacctacagttgagaatgcgaagagtttattatattctcgcttcttc
gacccaaaacgttatgatttagcaagtgttggacgttataaaatgaataaaaagttacat
ttaaaacaccgtttattcaaccaaacattagctgaacctattgttgatgttgaaacaggt
gaaattgtagctgaagaaggtacattattagatcgtcgtaatttagatcaaatcttagat
gtactcgaaaataatgctaaccaaaaagtattcactttagaaaatggtttgttagacgaa
cctattgaaattcaatcggttaaagtttatgttcctggagatgaagaaaagcgtacaact
acaatcatcgggaatgcatttcctgatgacgaagtgaaatgtatcacacctgcagatatc
ttatcttctgttagttatttctttaacttactagctggagttggtttcacagatgatatc
gatcacttaggtaaccgtcgtttacgttcagttggtgagttattacaaaatcaattccgt
attggtttaagtcgtatggagcgtgtagtacgagaacgtatgagtttacaagatacggaa
tcggtaacacctcaacaattaattaatatccgacctgtaattgcgtcagttaaagaattc
tttggtagttcacaattatctcagttcatggaccaagctaacccgttagctgaacttacg
cataaacgtcgtttatctgcattaggacccggtggtttgacgcgtgaacgtgctggtatg
gaagtacgtgacgttcactattctcactatgggcgtatgtgtccaattgagacacctgag
ggaccaaatatcgggttaatcaactcactttcaagttatgcgcgtgtaaatgaatttggt
ttcattgaaacaccatacagaaaagtagatatcgaaacaaatactgtgacatcacaaatt
gattacttaacagctgatgaagaagatgcatacgttgttgctcaagcgaattcacgctta
gatgacaatggtaagttcatggatgacgaagttgtttgtcgtttccgtggggataataca
gttatggcacgtgaacgtatggattatatggacgtttcaccgaaacaggttgtttctgct
gccacagcttgtatcccgttcttagaaaacgatgactcaaaccgtgcattaatgggagca
aacatgcaacgtcaagcggtgccgttaatgaatccagaagcaccattcgttggtactggt
atggaacatgtagctgcacgtgactctggagctgcagtagttgctaaatataaaggtcgt
gttgaacatgttgaagcacgacaaattaaagttcgccgtattgttgaagaaggcggaaaa
gaaatcgaaacggatttagatatctataaattagcaaaattcgcacgttcaaactcaggt
acttgttacaatcaacgtccaatcgttgaagccggtaatatcgtaacaaaaggtgaaatt
ttagcagatggtccttctatggaacttggtgagatggcacttggacgtaacgttgttgtt
ggattcatgacttgggatggttataactatgaggatgctgtaatcatgagcgaacgtctt
gtaaaagacgacgtttatacttctatccatattgaagaatatgaatcagaagcccgtgat
acgaagcttggacctgaagaaatcactagagatatacctaatgtatctgacaatgcactt
aaaaacttagatgatcgtggtatcatcttcattggtgctgaagtccgtgatggtgacatc
ttagttggtaaagtaacacctaaaggagttactgagttaactgcagaagagcgtcttctt
catgcaatctttggtgaaaaagcgcgtgaagtccgtgatacatcattacgtgtgccacat
ggtgcagatggtatcgtattagacgttaaagtcttcaatcgtgaagatggtgacgaatta
ccaccgggtgttaatcaattagtccgtgtatacatcgttcaaaaacgtaaaattcacgta
ggagataaaatgtgtggtcgtcacggtaataaaggggttatctcacgtattttaccagaa
gaagatatgcctttcatgcctgatggaacaccaattgatatcatgttaaacccacttggg
gtaccttctcgtatgaatattggacaagtattagagttacacttgggtatggctgctaaa
aacttaggtctacatgttgcatctccagtatttgatggggctaatgatgatgatgtatgg
tctacaattgaagaagcaggtatggcacgtgatggtaaaactgtactttatgatggacgt
acaggtgaaccgttcgacaaccgcgtatcagttggtgtaatgtatatgcttaaattagcc
cacatggttgatgataaattacatgctcgttcaactggaccatactcattagttacgcaa
caacctcttggtggtaaagcgcaattcggtggacaacgttttggtgagatggaagtatgg
gcacttgaagcatatggtgctgcatatacattgcaagaaatcttaacatacaaatcagat
gatacagttggtcgtgtgaaaacatacgaagcaattgttaaaggtgaaaacattcctcgt
ccgggtgtacctgaatcattccgcgtattaatgaaagagttacaaagtttagggttagat
gtaaaagtgatggataataaagatgaagagattgaaatgcgtgatttagaagatgacgat
ttcattgattctaaaattaacattgcaaaaaaaccagaaccagaagctgagatcactgaa
taa
DBGET
integrated database retrieval system
