Mariniplasma anaerobium: MPAN_001190
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Entry
MPAN_001190 CDS
T07723
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
manr
Mariniplasma anaerobium
Pathway
manr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPAN_001190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manr03019
]
MPAN_001190
03009 Ribosome biogenesis [BR:
manr03009
]
MPAN_001190
Enzymes [BR:
manr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPAN_001190
Messenger RNA biogenesis [BR:
manr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPAN_001190
Ribosome biogenesis [BR:
manr03009
]
Prokaryotic type
rRNA helicases
MPAN_001190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
SWI2_SNF2
AAA_19
Helicase_C
AAA_30
DHFR_1
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BCR35226
UniProt:
A0A7U9TK48
LinkDB
All DBs
Position
125012..125779
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AA seq
255 aa
AA seq
DB search
MSNSFQNFNLNPNLIKSLNVLNYNVPTPIQSLVIPALLNHRDLVIKSKTGSGKTAAFSIP
IIQHIKWDKREPQVLVLTPTRELAIQVKEDMFNIGRFSRIKVEAVYGKSSYESQAKQLKQ
RTHVIVSTPGRLIDHIVNKTVDLSHISALVIDEADELLRMGFIDEVERIIHFLPLKRLTI
LLSATMPTDIEKLSNLYMNNPELIVIEDNEVTENKLTQYYYEVEQKDKLNLINDVLITQN
PNSAIIFCNKKTSCR
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcatttcaaaactttaacttaaatcctaacttaattaaatcacttaatgta
cttaactataatgttcccacaccgattcaatcactggttatacctgctttattgaatcat
agggacttagttattaaatcaaagaccggaagtgggaaaaccgcagctttttcaataccc
attattcaacatatcaaatgggataaaagagaaccccaagttttagttttaacaccgact
agagaattagctattcaagttaaagaagatatgtttaatattggaagattttcaagaatt
aaagttgaagctgtttatggcaaatcttcatacgaaagccaagcaaagcaacttaaacaa
agaacacatgtcattgtttctacaccgggaagattaattgatcacatcgtcaataaaacc
gttgatttaagtcatatatcagccttagtcatcgatgaagcagatgaactattacgtatg
gggtttattgatgaagtagagagaatcattcattttttacctctcaaaagattaacaata
cttctttcagcaacgatgccaacagatatagaaaaattatctaatctatatatgaataac
cctgagctcatcgtcatcgaagataacgaggtaacagaaaataaacttacacaatattat
tatgaagtagaacaaaaagataaattaaacctcataaatgatgttttaattacccaaaat
cctaacagcgcaattattttttgtaataaaaaaacaagctgtagatga
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integrated database retrieval system
