Marisediminicola antarctica: BHD05_02720
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Entry
BHD05_02720 CDS
T06401
Name
(GenBank) ABC transporter
KO
K03701
excinuclease ABC subunit A
Organism
mant
Marisediminicola antarctica
Pathway
mant03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHD05_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mant03400
]
BHD05_02720
DNA repair and recombination proteins [BR:
mant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHD05_02720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHD05_02720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_16
DnaJ_CXXCXGXG
AAA_29
nSTAND1
SMC_N
AAA_22
APS_kinase
cobW
TetR_N
TrwB_AAD_bind
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QHO70929
UniProt:
A0A7L5ARC2
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All DBs
Position
566682..569114
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AA seq
810 aa
AA seq
DB search
MLESTSSPARAHQLPEGSSGWVRVRGAREHNLRGVDVDIPRDCLVVFTGVSGSGKSSLAF
GTVFAEAQRRYFESVAPYARRLIDQVGAPEIDSLDGLPPAVALKQSRGGTSSRSSLGTIS
SLSDVLRLLFSRAGSYPAGAAHLPAAAFSPNTVVGACPTCHGLGVGRSTTEELLVPDPTL
SINDGAIAVWASRGWQGVNFRRIASELGYDIDLPFQEFSREDRDWLLFSDEEPTVRVNVR
EGGNDRPYNGTWYSARNYLMRNYAKTESESQRQRLEPYIVVGACPTCNGKRLGQAALSVT
FGGFDISELARMPLSRLCEVLDAGLDAQSHGVDEHGAPAASAARALVKDLGVRVEAIVRL
GLGYLSMDRSSVNLSPGELQRIRLASQLRSGLFGVLYVMDEPSAGLHPADAAALYEALQQ
LISAGNSLFVVEHDLDIARRADWLVDVGPRAGSEGGRVVHSGPPHALEHVTDSVTAGFMF
PADGPRRHEARTAQSWRHFADLSRNNLQNVSVDIPMGVMTTITGVSGSGKTSMLADIIER
VDAQNDVENTPQRIISIDQKPIGRSPRSNLATYTGLFDTVRQLFAKTAEAEQRGFTASRF
SFNVDGGRCPTCKGEGFISIELVFMPDNYSPCPTCEGSRYNPETLEVRFEGANIAEVLGM
TVEDAREFFAAVPPVRRALDALTDVGLEYLTLGQPATELSGGEAQRIKLATELQRPTRTG
TIFVLDEPTGGLHPANVRYLVEVFESLTATGNTVIAVEHNMDVVAASDWVIELGPAGGDR
GGRVVAAATPADLLHHPDSVTAPYLARATG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaatcgacttcgtcccccgcccgcgcccaccagctgccagaggggtcctccggc
tgggtgcgggtgcggggcgcccgggagcacaacctgcgtggcgtcgacgtcgacattccg
cgtgactgcctcgttgtcttcacgggcgtctcggggtcgggaaagtcgtcgctcgcgttc
ggcacggtgttcgccgaggcgcagcgccgctacttcgagtcggtcgcgccctacgcccgc
cgcctcatcgaccaggtcggcgcgcccgagatcgactcgctcgacggactgccgccggcg
gtcgccctcaagcagtccaggggcggcacgagctcgaggtcgtcgctgggcaccatcagc
tccctctccgacgtgctgcggctgctgttcagccgggcggggagttacccggccggggcc
gcccacctgccggccgccgccttctcgccgaacacggtcgtgggcgcctgcccgacctgc
catggcctcggcgtcgggcgcagcacgaccgaggagctgctcgtgccggacccgacgctc
tcgatcaacgacggcgccattgccgtgtgggcgagccggggctggcagggcgtcaatttt
cggcgcatcgcgagcgagctcggctacgacatcgacctcccgttccaggagttctcccgg
gaggaccgcgactggctgctcttcagtgatgaggagccgacagtgcgcgtcaacgtgcgc
gagggcggtaacgaccggccgtacaacggcacctggtactccgcccgcaactacctgatg
cgcaactacgcgaagaccgagtcggagtcgcagcgccagcggctcgagccgtacatcgtg
gtcggtgcatgccccacatgcaacggcaagcggctcggtcaggcggccctctcggtcacc
ttcggcggattcgacatctccgaactcgcccggatgccgctctcccgactgtgcgaggtg
ctcgatgccggactggatgcgcagtcccacggcgtcgacgagcacggcgcgcccgcagca
tccgccgcccgcgcgctcgtcaaggacctcggcgtgcgggtcgaggcgatcgtgcgcctc
ggcctcggctacctgtcgatggaccggtcgagcgtcaacctgtcgccgggcgagcttcag
cgcatccgcctcgccagccagctgcggtccgggctcttcggggtgctctacgtgatggac
gagccgtcggcgggactgcacccggccgatgccgcggcgctctacgaggctctgcagcag
ctcatctccgcgggcaactccctcttcgtggtcgagcacgacctcgacatcgcccgccgc
gccgactggctcgtcgacgtcggcccgcgggccggcagcgagggcgggcgcgtggtgcac
agcggaccgccgcacgctctcgagcacgtgacggactccgtcaccgccgggttcatgttc
cccgccgacgggccccgccggcacgaggcgcgcacggcccagtcgtggcggcacttcgcc
gacctctcccgcaacaacctgcagaacgtctcggtcgacatcccgatgggcgtgatgacg
accatcacgggggtctccgggtcggggaagacgtcgatgctggccgacatcatcgagcgc
gtcgacgctcagaacgacgtggagaacaccccccagcgaatcatctcgatcgaccagaag
ccgatcgggcgctcgccgcggtcgaacctcgcgacctacaccgggctgttcgacaccgtg
cgccagctgttcgcgaaaacggctgaggccgagcagcgcggcttcaccgccagccgcttc
tcgttcaacgtcgacggcgggcgctgcccgacctgcaagggcgaagggttcatcagcatc
gagctcgtcttcatgccggacaattactcgccgtgcccgacctgcgagggatcccgctac
aacccggagaccctcgaggtgcggttcgagggggcaaacatcgcggaggtgctcggcatg
acggtcgaggatgcgcgggagttcttcgcagcggtgcccccggtgcgccgcgccctcgac
gccctgaccgacgtcggtcttgagtacctgaccctcgggcagccagccaccgagctgtcc
gggggagaggctcagcgcatcaaactcgcaaccgaattgcaacgaccgacccgcaccggc
acgatcttcgtgctcgacgagcccaccggcgggctgcatccggccaatgtgcgctacctg
gtcgaggtgttcgagtcgctcacggccaccggcaacaccgtcatcgcggtcgagcacaac
atggacgtcgtcgcggcctccgactgggtcatcgagctcgggccggccggcggcgaccgc
gggggcagggtcgtcgccgcggccacccctgccgacctcctgcaccacccggacagtgtg
accgcgccctacctcgcgcgggccaccggctga
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