Misgurnus anguillicaudatus (oriental weatherfish): 129415468
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Entry
129415468 CDS
T09481
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b isoform X1
KO
K08131
collagen type IX alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129415468 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129415468 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129415468 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
manu00535
]
129415468 (col9a1b)
Proteoglycans [BR:
manu00535
]
Extracellular matrix (ECM) proteoglycans
Others
129415468 (col9a1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
129415468
NCBI-ProteinID:
XP_073729701
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All DBs
Position
11:36236039..36268639
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AA seq
922 aa
AA seq
DB search
MIWRKVFLFLLCNVIKQCFSTGLHAHMLPFSSVSHLQTDQTMCPQTKYGNDVFPGFYIMT
QFSIAELARRGTVKKVPGTTSQHVAYKIGPEFNFRINTRSSFPMGLPEEFAFSAVYRMTG
NTATKIWNLWHMQDLNGNEQIAVTLNGEALSVEFSYKTQENGVMTALFPYQTHLFNSQWH
RILLVVKKDSVSLKSDCTATDTQQLAPRGQINLDGFTHIGKLKDSPAIAVPFELQSMLII
CDTTIQQKDICADLPARRQISEAEFQRVGGGPSGPAGVPGIDGIAGERGDPGEDGSAGPD
GDPGKPGSAGLPGLPGADGLTGPVGDPGPDGLSGQKGEPGKPGPRGEAGIGPDGPIGPPG
PGGLPGKEGKVGPPGAMGVRGPQGPRGATGPRGAAGMLGGSTELCPNACSPGAPGHPGLP
GMKGHKGVKGESGEPGKQGHKGEEGDQGAPGEVGTQGSTGAQGTRGAMGMIGSKGEMGIR
GVDGEPGPQGVAGATGDRGQRGGVGETGPKGDQGPQGPRGITGLPGPKGDGGLPGVDGRE
GIPGIPGAKGNAGKPGAPGEIGLQGLPGLPGSPGPKGTSGEKGNAGDPGLLGTMGSAGRQ
GERGEQGEFGPIGPIGQAGDRGEQGPPGPMGKSGARGPKGDLGLPGLPGPPGLPGVKGER
GEAGDSGPKGEQGDQGAEGTSGDNGDVGDPGPPGVKGEVGNQGDPGNRGPDGLRGQPGIE
GPPGSPGPRGVQGDRGSPGPRGSQGPAGKEPSDPHIRQVCMRVMQEQLAQLAASLRRPES
GAAGLPGKPGPPGPPGTPGDSGFPGHAGARGLPGLKGPPGPLGIKGPKGEMGDRGDRGPT
VRGPKGTPGPPGLPGEPGIPGYGQDGRDGERGPPGIPGQPGVPGPPGPAGQPGYCDPSAC
NLSAGAAHQSLKDSNMKGPGGN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgatctggagaaaggtttttcttttcctgttgtgtaatgtcatcaaacagtgtttctca
actggtcttcatgcacacatgctgccattttctagcgttagtcatctacagacggaccaa
actatgtgtcctcagactaaatatgggaatgatgtatttccaggattttatataatgact
cagttcagtattgctgagctggcaaggagaggaacggtgaagaaagttcctgggacaaca
tctcagcatgttgcatataagattggacctgagttcaacttcagaataaacacaagatct
tcatttcccatgggactgcctgaggaatttgcattttctgcagtttatcggatgactggg
aatacggcgactaagatctggaatttatggcacatgcaagacctaaatggaaatgaacag
atcgcagtgacactaaacggagaggccctgtctgtggagttctcgtacaagacccaagag
aacggagtaatgacggctttattcccttaccaaacacacctcttcaattctcaatggcac
aggattttactggttgtgaaaaaagactctgtgagcctaaaatctgactgcactgcaaca
gatacccaacagttggcaccaaggggacaaattaatctagatggattcacacatattgga
aaattgaaggacagccctgcaatagcagtgccgtttgagctgcagtcaatgctcatcatc
tgcgacacaaccatccagcaaaaagacatctgcgctgatcttcctgccagaagacagata
tctgaagcagaatttcagagggttggaggcggcccttctggtccagcaggtgtgcctgga
atagacggcattgctggggagagaggtgaccctggtgaagacggatctgctggccctgat
ggagatcctggaaaacctggttctgctggacttcctggtttacctggtgctgatggcttg
actggccctgtaggagatcccggccccgatggcctttctggacaaaagggggaacctgga
aaacctggacccagaggagaagctggtattggacctgatggacctattggacccccaggg
ccagggggacttccgggtaaggagggaaaagtgggacccccgggagccatgggcgtaaga
gggccacagggaccccgtggagcaacagggccccgtggcgccgcagggatgctgggtgga
tctacagaactgtgtcctaatgcatgctcacctggtgcacctggtcatcctggcttacct
ggcatgaagggtcacaaaggagtgaagggagaaagcggtgagcctggtaaacaaggacac
aagggagaggaaggagatcagggggcacccggagaagtcggcactcagggttcaactgga
gctcaggggactcgaggtgccatgggaatgattggctctaaaggagaaatgggcattcga
ggtgttgatggggagccgggccctcagggtgtcgcaggtgccacaggagatcgaggccag
agggggggagttggagaaaccggacctaaaggtgatcagggccctcaagggccaagaggc
atcacaggtcttccagggccaaaaggagacggcggtttgccaggtgtggatggtcgtgag
ggtattcctggcattccaggtgctaagggcaatgctgggaaaccgggcgctccaggagaa
attggccttcaaggtcttcctggtttaccaggaagcccaggaccaaaaggtacatcagga
gaaaagggtaatgctggagatccaggactcttgggcactatgggatctgcgggcagacag
ggtgagcgtggagaacaaggagagtttggacccatcgggcctattggccaagctggagac
cgtggagagcagggcccaccgggaccaatggggaaatcaggagccagaggtcctaaaggt
gatctgggtttgccaggacttcctggaccaccaggcctgcccggagtaaagggggaacgg
ggtgaagcgggtgattctggaccaaagggagaacagggagatcaaggagcagagggaaca
tcaggagacaatggagatgttggtgaccctggcccacccggtgtaaagggcgaagtcggt
aaccaaggagatccaggtaatagaggaccagatggactccgggggcagcctggcattgaa
ggacctcctggtagccctggaccacgtggtgtgcaaggggacagaggatctccaggaccc
cgtggctcccaggggccagcgggtaaagaaccgagcgacccacacatcagacaggtgtgc
atgcgtgtgatgcaggagcagctggcccagttggccgcaagtctgagaagaccagagtcc
ggtgcggccggactgccgggcaaacccggaccccccggacctccgggaaccccgggtgac
agcggcttccctgggcacgctggtgcaagaggacttccaggactcaaaggacctccggga
cccctgggtatcaaggggccgaaaggtgagatgggagacagaggagacaggggacccaca
gttcggggacccaaaggcacaccaggccctccaggtctacccggtgaacctggaataccg
ggatacggtcaggatggacgtgatggcgagcgaggaccacccggaatcccgggacagcct
ggcgttcccggtcctcctggtccagctggtcaaccgggttactgcgacccttcagcctgt
aatctgagcgcaggtgccgcccatcaatctctcaaagactctaacatgaagggcccggga
ggaaactaa
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