Misgurnus anguillicaudatus (oriental weatherfish): 129416751
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Entry
129416751 CDS
T09481
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04518
Integrin signaling
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129416751
04518 Integrin signaling
129416751
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129416751
09142 Cell motility
04820 Cytoskeleton in muscle cells
129416751
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129416751
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129416751
Exosome [BR:
manu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129416751
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129416751
Hyaluronan
Extracellular matrix or blood plasma proteins
129416751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
vWA_SIBA-E
Radical_SAM
adh_short_C2
Motif
Other DBs
NCBI-GeneID:
129416751
NCBI-ProteinID:
XP_073729647
LinkDB
All DBs
Position
11:complement(31767987..31816155)
Genome browser
AA seq
2767 aa
AA seq
DB search
MKKEWELLGLLLLTLCFYASNGQKVVCTQEAVADIVFLVDGSGSIGLENFQQIREFLSSL
VNHFEVSSDKVQIGLVQYSDKPHTEFFLNTYRNKEEIINYITNLRYIKGGTNTGQGLEFL
LRTHFIQEAGSRIQHEVPQIAIVITDGESQDEVQSHAQKLRESGIELFAIGIKDTDEAML
KQIASKPHSQHVYSVSDFAALKGIFQSVIHQLCTTVEVAHSEVVMTMRECNETAQADVVL
VVDSSGSIGETDFAEVKTFLHAVVDKLNLREDRVRLGLIQFSHQPHPEFLLGDYLDKRDL
HQKVDNLIYHKGGTNTGQALTFIRENYFNQARKNVARIAILITDGDSQDPVEEPAQKLRS
QGIAIFVIKVGKGNMPKLRTIANIPHEEFVFSIDSYQELKSLQESLRKRVCLTASDQAFV
PKFADLFILVDSSASRQDMNLIRLFLQRLINQLNVGKNINRIGLAQFSENVKEEFLFNAE
ITKAEMVTRVRSLQLRPTGQRRIGNAIEYAHTNYFNTAAGSRASEGFKQFLLVISAGESA
DGVVQAARSIKKDAVTVFAVGLPKAEKYELKDISTGLHNYQIVNNNMAIQVQQKIKAAVE
TLDEGAVTEECRMDVVADIAFIVDQSSNVRSGHFRLVRNFLKKTIRALEIENNRTNKINI
KVAVILYSNTPQADVYFNTFDKKDDILRYINSISYGRGKTNTGAALKFAEEKVFTKARGS
RRHEHVQQVAVVITDGKSSDDASTAAASLRRSGVTVFAVGIQEPSESDLRQIASYPHTKF
VFNVENFNELNSLAQILPRTLCNDITDSIIPSTKFSVLQEGCKLTEEADIYFLLDESGSI
SYSDFDDMKSFIMEFLDVLEIAPDKVRVGVVKFASRATVTFQLNTYSTKDAVQKAVKSLF
MEGGGTRTDLGLQEMIPLFKDAARTRGKKVRELLIVITDGKSENVETPVQVPAEELRKMN
VGIYAIGVKNASLPELELIAGSKERTYYVENYDFLKHIKKEILKEICSFEACEGLLADVI
FLIDGSERVDPEDFDKTKALLEFMVNKLAIGPNKIQVAVVQYSANTNEEFSLNAFDNKDK
IIQEIKTIRQMMGKTHTGRALTEVLQTFDVSRGGRSSALKFLIVLTNGESNDEVTTPAKD
LRDNSIDIFTIGVGNSNRSQLLDIAGSHEKLFFKENFGSLNDLSSEIVLKICNTECKRPE
LMDVIFLVDAAGSPNKNGFQEMKSFMSNVVSKSEVGKKRVRFGTIVYSDVPRSEFTLNQY
DRQDEVQGAILNLIASGGSRNTAQALKYALTYFTDVHGGRRAKNVPQVLFLITDGQVKDP
YNLADWSQTLPESEVNVIAIGTAGAQEAELKMIAGDRGQVHYVNDYQALNGLQAQIKNEL
CNLTKPVCEKEQADLVFLIDGSESIKPPSWEIVKQVMLGIVNELNIAPDKWRVGVAQFSD
IFLDHFYLNTYSTSADVNRDITNIQQRRQGTFTWNALRRVNGYFTTKNGSRIAEGVPQNL
LLITDGEATDPKDLNALASLRAKKIDITVIGVGNEIAKTELIEIAGGSDKVFIETFESLV
LKKTIKKVLSQLCIIPQGQESSSCDIDIGIGFDVSERQITQPLLRPQIEMLVRAAIHSVS
VSPDLCCNQKDKIETKIGYRLVSGQDGRVLKDFNFKTYSEDVVRELLLMRPAEPLAFNTF
LLDSFREKFLPSNAKVKVMMLFTDGLDDSIERLMASSTSLRASGISALLIVSLEGFVDFH
LLEFGRGFEYMQPLSINMLNIGNALIQQIQSVALRVCCNISCSCTGQPGARGPPGPPGEK
SFPGERGFPGFPGDEGPMGERGPPGINGTKGDRGCPGIRGVKAQRGHPGNKGEAGEDGLD
GVNGEQGDTGPNGISGPKGDPGNAGMKGLKGPPGPKGHSGLRGDPGSAGPDNRIRGPKGE
RGDAGPPGAAGVDGSPGGDGDIGDPGAPGRRGQPGLPGATSDERGDPGQRGPQGYPGQRG
SDGITGPEGIKGEPGLPGVQGPFGLPGVEGSKGRPGSRGPRGLPGDRGIKGDHGPVGLQG
HPGQEGAFGFGPVGPKGNKGTPGYIGFPGLEGEDGAKGSGGSKGHKGYPGTPGNVGDPGN
PGPPGETGIDGHTGKKGPPGISPMPECELVEYIRDNCACCEAHRGQCPVHPTELVLALDM
STGVTDQAFEQMRTAAISLLKNINIAQKTCPWGARVSVISYSNETKSLIRFSDHHKQETL
EEAIKMIPLERTAKVRDIGQAMRFMARNIFKRVREGQLMRKVAVFFTNGPSRDALSTATA
MLELRAADIGLGVIALRPANDVRQAVQVDDTGSYIVVDGQGVDRIKRCIICFDRCKPDPV
CGINLQPEPLQMDLDLSVLMDGSADLNTQQYLGVKELTLSLLDQIEMSSDPHTADRKTRL
AFYQQSSIYGSSYIHEEFSFTQFRDRSLMKRHITNALKQVGGTSHPEFALEWMITNVLLK
AETQRKKRMVVAVFGEDSEHLNKAQLDYVSKLCRCRNVVMFIVMTGQKFDWTQMEKLTNS
PLEHRLVFMGSPIQKDREYARRFIYTFLHLLKRELIPQVVSQSRECDGFEPRPVEFEQSP
DRDIITTAPPTEKAPEDYDVYNGGETKPFTDSYPDIDKYEYDQADTPEFKTAARCFLKRD
SGTVCASYEPRWYYNQKAKRCQQFWYGGCGGNENRFLTEAECFSECGSTVLETLSKDDPI
ISEDVCHLKYDEGTCSAYSVKWYFNINNGECLQFWYGGCKGNGNRFNTQNECESRCLKDR
KASPGTS
NT seq
8304 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaatgggaattattgggattgcttctcctaacattatgcttttatgccagc
aatggccaaaaagttgtatgtacgcaggaggctgtggcagacattgtgtttctggtggat
ggctctggcagcattgggctggaaaacttccagcaaatccgtgaattcctctcctctcta
gtaaaccactttgaagtttcctctgacaaagtgcagatcggtctggtccagtacagcgac
aagccgcacactgagtttttcctcaacacttatcgaaataaagaggaaattatcaactat
attacaaatctgcgttatataaagggcggtacaaatactggccagggtctggagttcctg
ctgagaacccatttcatccaggaggccggaagtcgcattcagcacgaagttcctcagatt
gccatcgtcatcacggatggagaatctcaggatgaggtgcaatcgcacgctcagaagctc
agagaaagcgggatcgaattgtttgccatagggatcaaagatacagatgaggctatgcta
aaacagatcgcgagcaagccacacagtcaacacgtctacagcgtctcagactttgcggct
ctgaaaggaatctttcagagtgtaatccatcagctgtgtactacagtagaggtagcacac
agtgaggttgtcatgacaatgagagaatgcaatgagactgctcaggcagatgtcgtgctc
gtcgtggactcatccggcagcattggggaaacagactttgcagaagtgaagacgttcctt
catgctgtcgtggacaaattaaaccttcgagaggacagagtgagactgggtctcatccag
ttcagtcaccaaccacacccagagtttctgcttggtgactacttggataagcgcgacctg
caccaaaaagtggataatcttatctaccataaaggaggaaccaacacaggtcaggctctg
actttcatccgtgagaactatttcaaccaggccaggaaaaacgtcgctcggatcgccata
ctcatcactgatggtgattcccaagatcctgtagaggaacccgcccagaagctacgaagc
cagggaattgccatctttgtgatcaaggtgggaaagggcaacatgccaaaactgcgtacc
attgccaacatcccgcatgaggagtttgtgtttagtattgacagttatcaagaactgaaa
agtctacaagaaagcctgcgcaaaagagtctgccttactgccagtgaccaagcttttgtt
ccaaagtttgctgatctcttcatactggttgatagttcggcatctagacaagatatgaat
ttgataagattgtttttacaaagattgatcaaccagctcaacgtggggaagaatataaat
cgcatcggcctggctcagttcagcgagaacgtcaaggaagaattcctgttcaatgccgag
atcaccaaggccgaaatggtgactcgtgtccgcagcctccagttgaggcctacagggcag
cgcagaattggtaatgcgattgaatatgcacacacaaattatttcaacactgctgcgggg
agtcgcgcgtctgaaggctttaagcagttcctgttagtgatttcagcgggtgaatctgct
gatggtgtcgtccaagcagcccgctcgattaaaaaagatgcagtgaccgtttttgcagtt
ggtctgcccaaagctgaaaagtatgagttgaaggatatctctactggactgcataactac
cagattgttaataataacatggcaattcaagtgcaacaaaagatcaaggctgccgtcgaa
acactggatgagggtgctgtcacagaggaatgcaggatggacgttgtggcagatattgca
tttattgtcgaccagtccagcaatgtcagatccggacatttccgtcttgtgcgcaacttt
ctaaagaaaaccatcagagctctcgaaatagagaataacagaacaaataaaataaatata
aaggtggcggtgatcctctacagcaacacccctcaggctgacgtttacttcaacactttc
gataagaaggatgatatcctccgctacattaacagcatttcatatggccgtggaaaaacg
aatacaggagccgctctcaagtttgctgaagagaaggttttcaccaaagcaagaggcagc
agaagacacgaacacgttcagcaggtggctgttgtcatcacagatggaaagtcgtcagat
gatgcgtccaccgctgcggcttcgttgcgtcgttctggcgtcaccgtgtttgcagttggt
atacaagaaccgtcggagtccgatttgaggcaaatcgcatcgtacccacacacgaagttt
gtgttcaacgtggaaaacttcaatgaactgaattcactcgcccagattttacccagaacg
ctttgcaatgatatcacagacagcatcataccttcaacaaaatttagtgtattacaagaa
ggatgcaagctaacagaagaagccgacatctactttctgctggatgaatcgggaagtata
tcctacagtgactttgatgacatgaaaagcttcattatggaatttctggatgtgcttgag
atcgcaccggataaggtgcgtgtcggcgtggtgaagtttgcttcccgagcaacggtaact
ttccaattaaacacttacagcacgaaagacgccgtccagaaggcagtgaaaagcctcttt
atggaaggaggcggcaccaggaccgatctggggttgcaggaaatgataccgttgttcaaa
gatgccgcacgcacccgtgggaagaaggttcgcgaacttctcatcgtgatcacagatgga
aagtcggaaaacgtagaaactccggtgcaggtccctgctgaggagctgaggaagatgaat
gtcggcatttacgctattggggtgaaaaacgcctctttgcccgagctggagctaatagcc
ggcagcaaagaaagaacatattatgtggaaaactatgatttcctcaaacacatcaagaaa
gaaatccttaaagaaatatgttcgtttgaagcttgtgaaggtcttctggccgatgtcatc
ttccttatcgacgggtcagaaagagttgaccctgaggactttgacaagacaaaggcattg
ctagagtttatggtcaataaattagcaattggtccaaacaagattcaagttgctgttgtt
cagtacagcgcaaacacaaacgaggaattttccttaaatgcatttgataataaagataaa
ataatacaggaaataaaaactatcaggcagatgatgggaaaaacacacaccggaagagcc
ctcacagaggtattgcaaacattcgatgtgtcgagaggcggccggtccagcgctttaaag
ttcctgatagttcttacgaacggagagagtaatgatgaagtgacaacacctgctaaagac
ctgagagacaattccattgacatctttaccattggtgtgggaaattcaaacaggtctcaa
ttgttggatatcgctggatcgcatgaaaaattgtttttcaaagaaaactttggatctctg
aatgatttaagcagtgagatcgttcttaagatctgtaacacagaatgcaaaagacctgaa
ttgatggacgtcatttttcttgtggatgccgctggtagccccaataaaaatggtttccag
gaaatgaaaagttttatgtcgaatgtggtaagcaagtctgaagtcggaaaaaaacgggta
cgttttgggacgatcgtatactctgacgtccctcgttctgagttcacgctaaaccagtac
gacaggcaggatgaggttcaaggtgccatcttgaatcttatcgcctctgggggaagcaga
aacacagcccaggccctgaagtatgcgctcacctactttaccgatgttcatgggggaagg
cgagcgaagaatgtcccgcaggtgctctttctgattacagacgggcaggttaaagatcct
tacaatctggcagactggagtcaaactctgccagaatcggaagtcaatgttattgctatt
ggtacagcaggagctcaggaggcggagctaaagatgatagcaggagacagaggacaagtt
cactatgtgaatgattatcaggcactgaatggactgcaagcacaaatcaaaaatgagctt
tgcaaccttaccaaaccagtttgcgagaaagagcaggctgaccttgtatttctaattgat
gggtcagaatccatcaagccaccaagctgggagatcgtcaaacaagtgatgcttggcatc
gtgaatgagttaaatatagctccagacaaatggcgagtgggtgtcgcacaattcagcgat
atattcttggatcacttttacttgaacacgtacagtacttcagcagatgtaaatcgagac
ataacaaatattcagcaaaggcgacaaggtacatttacttggaatgccctgagacgtgtt
aatggatatttcaccacaaagaatggatccagaatagcagagggagtccctcagaatctg
ttgctgatcactgatggagaagctacagatcctaaagacttgaatgccctggctagtctc
agagccaagaagatagacatcacagttattggggttggaaatgaaattgcaaaaactgag
ctgattgaaatagctgggggttctgataaagttttcatcgagacctttgaaagccttgta
ctgaagaaaaccataaaaaaagtgttaagtcaactctgcatcattccacaaggtcaagag
tcaagttcttgtgatatcgacattgggatcgggtttgacgtgtccgagcggcagattacg
cagcctctgttgagacctcagattgagatgctggtcagagcagctattcacagcgtctct
gtgtcgccggatctttgctgcaaccagaaggacaaaatcgaaactaaaattggctacagg
ctggtttctggtcaggacggcagggttctgaaggattttaattttaagacgtacagtgag
gatgtggtcagggagttgttgttaatgcgacccgcagaacctttggccttcaacacgttc
ctcttagattcctttagagaaaagtttctcccctcaaatgctaaagtaaaggtgatgatg
ctctttactgatggattggatgacagcattgagcgtttgatggcgagttcaacgagtctt
agagccagtggcatcagtgcactgttgattgtgtctttggagggattcgtggattttcac
ctgctggagtttggcagagggttcgaatacatgcagccactgtccatcaacatgctgaat
ataggaaacgctcttatacaacagattcaatctgttgctctgagagtttgctgtaatata
tcatgttcgtgcactggtcaaccaggagcaagaggtcctcctggtcccccaggtgaaaag
agttttccgggtgagagaggtttccctggctttcctggagatgagggccctatgggtgaa
agaggacctccggggataaatgggactaagggagatagaggttgccctggaatcagagga
gtcaaggctcagcgaggccaccctggaaataaaggagaagctggggaggacggcctcgat
ggagttaatggagaacagggtgacactggtccgaatgggatttcaggacctaaaggagat
ccaggcaatgctggtatgaaaggtttgaaggggccacctggacccaagggccacagtggt
ttgagaggagatcctggctcagcaggaccagacaacagaattcgaggtccgaagggcgag
agaggagatgcgggacccccgggtgccgcgggggttgatggatccccaggtggtgatgga
gatatcggtgacccaggcgctcctggaagaagaggccaaccaggacttccaggtgccact
tcagatgaaagaggtgacccagggcagcgaggacctcaaggttaccctggacaaagggga
tcagatggtattactgggccggaaggaataaaaggcgaaccaggcttacctggagttcag
ggtccgtttggcctgcctggggttgaagggtcaaaaggaaggccgggaagcagaggaccg
aggggtttaccaggtgacagagggatcaaaggagaccatggaccagtaggactccaggga
catccgggtcaggaaggagcatttggatttggacctgtaggacctaaaggaaacaaggga
acccctggatacatcggctttcctggtttggagggtgaggatggtgccaaaggatccggt
ggaagtaaaggacacaaaggctatccaggaacaccaggaaatgttggtgatccaggtaat
ccaggtcctccaggggaaacaggcatagatggacacacaggcaagaagggaccccccgga
atcagtccaatgcctgaatgtgaactggttgagtacattcgagacaactgtgcttgctgt
gaagctcacagaggccagtgtccagttcaccccacagagctggtgttggctctggacatg
tccacgggtgtgaccgatcaggcctttgaacaaatgcgaaccgctgccatctccttacta
aagaacattaacatagcccagaaaacttgtccgtggggagctcgggtgtccgtgatctca
tacagcaatgagaccaagtccctcatccgcttctcagaccaccataagcaggagaccctg
gaggaggctattaagatgattcctctggagagaacggcaaaagtcagagacatcggtcaa
gccatgcgcttcatggcacgaaacatcttcaaacgcgtccgtgagggccaactgatgaga
aaggtggccgtgttcttcacaaacgggccatcgagagatgcgttgagcactgccacggca
atgctggagcttcgggctgcggacatcggcctcggcgtgatagctttacgtcctgcgaat
gacgtgcgccaggcggttcaggttgatgacacaggaagctacatcgttgttgatggacag
ggagtcgatcgcattaaacggtgcatcatttgttttgaccgatgtaaaccagacccagtg
tgtggtattaatctgcagccggaacccctgcagatggatttggacctgtctgtgctaatg
gatggctcggctgacctaaacactcaacagtatcttggagtgaaggagctcacgctttct
ctattggaccagattgagatgagcagcgacccgcacactgcggacaggaagaccaggttg
gccttctaccagcagagctccatttacggctcctcttatatccacgaggagttcagtttc
actcaatttagggatcgtagcttgatgaaaagacatatcactaatgcactgaagcaagtg
ggtgggacgtcccatcctgagttcgctttagaatggatgattactaacgtcctccttaaa
gccgagacacagcgaaagaagcgaatggttgtagctgtttttggagaagactccgagcat
ctgaataaagctcagcttgattatgtgtcaaaactgtgtagatgtcgaaatgtagttatg
tttatcgtcatgacgggacagaaattcgactggacacagatggagaagctcaccaactct
cctctcgagcatcggctggtattcatgggatctcccatacagaaagatcgggagtatgcc
agacgcttcatctacactttcctacacctgctcaaaagagaactcattcctcaagtggtg
tcacagtctcgtgagtgtgatggttttgaacccaggcctgtcgagttcgaacaatctcct
gatagagacatcatcactactgctcccccaacagaaaaagctcctgaggactatgacgtt
tataatgggggtgaaacaaaaccattcacagactcctatccagatatagataaatatgaa
tatgaccaggctgatacccccgagttcaaaactgcagctcgatgttttcttaagagagat
tcaggcaccgtctgtgcgtcgtatgagcccagatggtactacaatcagaaagcaaagaga
tgccagcaattctggtatggaggttgtggaggaaacgaaaaccgttttttgacagaggcg
gagtgtttcagcgagtgtggctcgacagttttggaaactctttcaaaggatgatcccatc
ataagtgaagatgtttgccacctgaagtatgatgaaggaacatgctcagcctattcagtc
aaatggtatttcaacatcaacaatggtgaatgtctccagttctggtacggcggatgcaaa
ggaaacggcaacaggtttaatactcaaaatgaatgtgagagtcgctgtctaaaggacaga
aaagcatctcctggcacctcctaa
DBGET
integrated database retrieval system
