Misgurnus anguillicaudatus (oriental weatherfish): 129431157
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Entry
129431157 CDS
T09481
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129431157 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129431157 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129431157 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
manu00535
]
129431157 (col9a3)
Proteoglycans [BR:
manu00535
]
Extracellular matrix (ECM) proteoglycans
Others
129431157 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129431157
NCBI-ProteinID:
XP_073731021
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All DBs
Position
13:6017959..6044483
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AA seq
678 aa
AA seq
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MAVLSALQLLFLCQLLASSSAQRTGPRGLPGVPGPPGPPGKDGIDGKPGPPGLPGKPGPK
GKAGTPGAAGIPGIPGLPGVDGLTGPDGPAGKDGLPGAVGDRGPPGPGGPPGRGRPGVAG
LSGANGLPGGPGPQGPPGLEGLPGLPGLPGLDGPPGLPGTLPEGGGDLLCPAICPPGPPG
PPGMPGFKGHTGHKGDKGEMGKNGEKGDQGPPGPPGIPGTVGLQGPRGLRGLQGPVGSVG
DRGLPGFRGKPGVAGVIGKTGDSGEKGHQGFKGPKGEIGKIGPKGVPGGVGPKGEPGMPG
RDGKDGTQGLDGEKGDAGRPGVSGEKGPNGLPGLQGKAGTKGAKGGVGDPGKMGETGPSG
EPGIPGDIGIPGERGLAGPRGVSGGIGLPGNAGPQGVKGYQGVKGALGDAGLPGPTGIRG
GFGEKGPVGARGPKGDVGMAGIDGLPGENGEPGPYGPVGQKGEPGKRGELGPKGVVGAQG
EIGGRGAPGRPGPLGFQGEQGFPGVPGKTGVPGNLASEQHIRELCGSMIDDQIAQLAANL
RRPLAPGAVGRPGPPGPPGKPGEVGSIGHPGASGPPGYRGLPGDLGDSGPRGDVGEPGDK
GPVGKAIDGPIGDQGAPGLPGVNGFVKDGRDGAPGDPGESGEAGRTGRPGHHGSPGICDT
SACQGPVVHSKSSSPKNH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgttgtcagctcttcagctactttttctttgccagctgttagcatcatcgtct
gcccagaggacaggtccccgtggtctacctggtgtgccagggccacctggacccccagga
aaagatggcattgatggtaagcctggtcctcctggacttccaggaaagcctgggccaaag
ggaaaagctggtacaccaggagccgcaggaatcccaggaatacctggcctccctggagtg
gatggtttgacaggtcctgatggtccagctggaaaggacgggctaccaggagcagtaggc
gacagaggacctcccggaccaggtggaccccctggcagaggcagaccaggagttgccggt
ctttctggagctaatggacttccaggtggaccaggacctcagggaccacctgggcttgag
ggtcttccaggacttcctggtctgccgggtctagatggaccacctgggcttccaggaacg
cttcccgaaggtggcggagacctgctgtgtccggccatctgtcctccaggtccaccggga
cctccaggaatgcctggattcaagggtcatacaggtcataaaggagataagggagagatg
gggaaaaatggagaaaagggtgatcaaggcccacctggtcctcccgggatccccggtaca
gtgggtttacagggtccccgaggtctgagggggcttcagggtccagtgggatctgtagga
gatagaggattgcctggcttcaggggaaaacctggagttgccggtgtcattggaaaaact
ggtgacagtggtgaaaaaggacatcagggtttcaaaggacccaaaggagagattggaaaa
ataggccctaagggagtaccaggaggtgtgggacctaaaggtgaacctggcatgcctgga
cgagatggaaaggatggaactcaaggactggatggtgaaaagggggatgctggaagaccc
ggggtatctggtgagaaaggaccaaatgggttgcctggtttgcaaggaaaagctggtaca
aaaggagccaagggaggagttggagatccgggaaagatgggagaaaccggaccatctgga
gagccaggtatccctggtgatattggcatccccggagagagaggattggctggacccaga
ggtgtatctggtggcattggactgcctggaaatgctggtccacagggtgtaaaaggatat
cagggtgttaaaggtgcccttggtgatgcaggtttgcctgggccaactggaatcagaggc
gggtttggtgagaagggtccagtcggggctagaggtcctaaaggagacgtgggtatggcc
gggattgacggtttaccaggagagaacggagagcctggtccatatggtcctgtcgggcag
aaaggagagcctggtaaacgtggtgaactgggacctaaaggtgttgtaggagcacaggga
gagatcggaggaagaggtgcacctggaagacccggaccgttgggattccaaggagaacaa
ggttttccaggagttcctggaaaaaccggtgttcctggcaacctggccagcgagcagcac
atcagggaactgtgtggctcaatgattgatgatcagattgctcagctggctgctaaccta
agaagacctctggctcctggtgctgtgggacgaccgggacctcctggacctccagggaag
ccaggagaagttggatctattggtcaccctggagcaagtggtccaccaggatatagagga
ttgccaggagatcttggtgattctggtcctagaggggatgttggtgagccgggtgataag
ggtccagttggtaaagccattgatgggcccattggtgaccagggtgcaccgggtctgcca
ggtgttaatggcttcgtgaaagatgggcgcgatggagcacctggagatcccggagagtca
ggagaggccggaagaacaggccgtccaggacaccatggatcacctggaatctgtgacacg
tcagcatgccagggtcctgtggttcattcgaagtcctccagtcccaagaaccattaa
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