Misgurnus anguillicaudatus (oriental weatherfish): 129433446
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Entry
129433446 CDS
T09481
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129433446 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129433446 (cnot1)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129433446 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129433446 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
129433446
NCBI-ProteinID:
XP_073724766
LinkDB
All DBs
Position
6:18867882..18891255
Genome browser
AA seq
2380 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFVKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPDKRDILMDRIL
PDSGEINKTMMESSLADFMKEVGYGFCASLEECRNIILQYGVREVTAGQVARVLGMMART
HSGLSDGIPLQSITSPVGGGIWSDGKDKSDGSQAHTWNVEVLIDVVKELNPNLNFKEVTY
ELDHPGFVIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVF
CFADCPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLFSFPIKH
CPDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIM
HSMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDK
WLTDKIREHGEPFIQACVTFLKRRCPSILGPPLAPDKDQPKSAQLPPETLATMFACLQSC
AGSVSQELSETILNMVANCSNVMNKARQPPPGVLPKGRAPSTSSLDAISPVQMDPLSGMG
SLNLGVTSTSHTTSMQGFPSLQGSAFSNPQSPAKAFSNLPNANPSTAFQGINPLSSQLQG
PLSTSLSGIGSGLGMPPVSSDPFGTRKMSTPGLNPSTFQQTDLSQVWPEANQHFTKEIDD
EANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYP
DKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLK
DYPQYCQHLASIAHFLQFPHHLQECIQYIEYGQQSRDPPVKMQGSITTPGSLALAQAQAQ
SQTPKAPQPGQPSTLVTTATTTTTVAKTTTIARPTAVGLKKDVPPSINTTNIDTLLVATD
QTERIVEPPENVQEKIAFIFNNLSQSNMSQKVEELKETVKEEFMPWVSQYLVMKRVSIEP
NFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMIT
LAKNKPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSVIFRPQNPWTMGIM
NVLAELHQEHDLKLNLKFEIEVLCKNLSLDISELKPGNLLRDKEKLKNLEEQLSAPKKET
KPPEEMLPIVTTVDPVAFTTAPSTPATTTTCTATGPPTPQFSYHDINVYALAGLAPHINI
NISIPLLQAHPQLKQCVRLAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESH
MRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMMEEAAARIA
QDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPMVLTYQAERMPEQ
IRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWPADDVAHIYDKC
ISDLEQHLHAIPPALAMNPQTQAIRSLLEAVVMARNSRDGIAALALLQKAVEGLLDATSG
ADTDLLLSYRECHLMVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNH
LVNMQQYDIHLAQSMENGLNYMAVAFAMQLVKLLLVDERSGSHITEADLFQTIETLMRTS
AHSRANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYL
LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA
EQQHPTTSPAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQ
DHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVY
AWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKGTL
RVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLS
EINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQLIN
ALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRY
PNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFK
FWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctacctggtggacaattta
actaagaaaaactacagagccagccagcaagaaatacaacatattgtgaatcgtcacggc
cctgaggcagacaggcatctattacgctgtctcttttcccatgtggattttagtggcgat
ggtaaaagcagtggcaaagattttcaccagacacagtttctgatccaggagtgtgtgtct
cttattaccaaaccaaattttatttcgacactctgctacgccattgacaatcccctgcac
tatcaaaagagcttaaagccatcacctcatttatttactcagctgagtaaagttctcaag
ctaagcaaggttcaggaggtgatttttggccttgctctgctgaactctagcaacgcagac
cttagagggtttgctgcccagttcgtgaagcagaagcttcctgacctcctccgttcgtac
gtggacgcagacctcggaggaaatcaggaaggtggcttccaagacattgccatagaggtt
ctgcatctgctcctctcccatcttctgttcggtcagaagggctccagcggagttggacaa
gagcagatcgacgcctttctcaaaacactgtgcagagatttcccgcaagagcgctgccct
gtggtgcttgcgccactgctctaccctgacaaacgggacattctcatggacaggatcttg
ccagactctggagagataaacaagaccatgatggagagttcccttgctgacttcatgaaa
gaagttggctatggcttttgtgcaagtcttgaagaatgcaggaacataatcttgcagtat
ggggtgcgagaggtgacggccggccaggtggccagagtgctgggcatgatggcccgcact
cactctgggctttcagatggcatccctttacagtccatcacgagtccagttggtggtggc
atttggagtgatgggaaggacaaaagtgatggctcccaggcccacacctggaacgttgaa
gttctgattgatgtggtcaaagaattgaaccccaatctaaacttcaaagaagtgacctat
gagctggaccacccaggttttgtgatccgggatagtaaggggcttcagatagtggtgtat
gggatccagaggggtctggggatggaggttttcccagtggatctcatttacagaccatgg
aagcacgcggaaggacagctgtcattcatccaacactctttgatgagtcctgaagtgttc
tgcttcgctgactgcccatgtcacactgttgccattgacatcctgaaagccccacctgaa
gatgacaacagagaaatagccacatggaagagcttggacctggtggagagccttttgcgt
ctctctgaagttgggcattatgaacaggtgaagcagctttttagcttccccatcaagcac
tgcccggatatgctggtgctggccctgctgcagatcagcacctcctggcacaccctgcgt
catgagctcatctccactctcatgcccatcttcctgggcaaccaccccaactccgccatc
atcttgcactatgcctggcatggacagggtcagtccccatccatccgtcagcttatcatg
cactctatggccgagtggtacatgagaggagagcaatacgaccaggctaaactgtctcgc
atcttggatgtggctcaggacttgaagtctttatcgatgctgctgaatggtactccattt
gcctttgtaattgaccttgctgcacttgcctctcgccgtgaatacctcaaactcgacaaa
tggcttactgacaaaatccgagagcatggggagccgtttatccaggcgtgtgtcacgttc
ctaaagagacgttgtccttccatcctgggtccacctttggccccagataaagaccagccg
aaaagtgctcagcttcctcctgaaacactggctaccatgtttgcgtgtctccagtcttgt
gctgggagtgtatctcaagagctgtcagagactatcttaaacatggtggccaactgtagc
aatgtgatgaacaaagcccggcagccaccgccaggtgtcttgccaaaggggcgagcaccc
agcaccagcagcttagatgctatctcacctgtgcagatggaccctctgtctggcatgggc
tcgctgaatttgggcgtcacatccacatctcacaccacaagcatgcaaggatttcccagc
ttacagggctctgccttcagtaacccccagtccccagctaaggccttttcaaacctgccc
aacgcaaatcccagcacagctttccaaggaatcaaccccctctcttctcagctacaaggt
cctctgagcacaagcttgtctgggatcggctcaggcttgggcatgccccctgtcagcagc
gaccccttcggcaccaggaagatgagcacaccggggttgaacccgtccaccttccagcag
actgacctttctcaggtgtggcccgaggcaaaccagcactttactaaggagattgacgat
gaggcgaacagctacttccagcgcatctacaaccaccctccgcaccccaccatgtctgtg
gatgaggtgctagaaatgcttcaaagattcaaagactccaacattaagcgggaacgagag
gtgttcaactgcatgctaaggaatctgtttgaggagtacagattttttccccagtatcct
gacaaagagctgcacatcaccgcttgcctcttcgggggcatcatcgagaagggcctggtt
acatacatggcgctagggttggcgttacgatacgttctggaagctttacgcaaacctttc
ggatcaaagatgtattactttggaatcgctgcactagatagatttaaaaatagactgaag
gactatccccagtactgtcagcacttggcatctatagcccatttcttgcagttcccacac
catttacaagagtgtatacagtatatcgagtatggccagcagtcaagagaccctcctgtg
aagatgcagggttccattaccaccccaggcagcctggcactagcccaagctcaagcccaa
tctcagacccccaaagccccccaacctggtcaacccagcaccctggtgaccacagctacc
acgaccaccactgttgccaaaaccaccaccatcgccagacccacagctgtcggactgaag
aaagacgtgccaccttcgatcaacaccacaaacatcgacaccctgttggtggccaccgac
cagactgaaaggattgttgagcccccagagaatgttcaggaaaagattgcgttcatcttc
aacaatttgtctcagtcaaacatgtcccaaaaggttgaagaactgaaagagactgtgaag
gaagagttcatgccgtgggtctctcaatacctggtcatgaaacgtgtcagtattgagccc
aacttccatagcttgtattctaactttctggatacactgaaaaaccctgagtttgtcaag
atggttctcaatgagacttacagaaacatcaaggtccttcttacctccgataaggcagct
gctaacttttctgatcgatccctgctgaagaatttgggtcattggcttggaatgatcacc
ctggctaaaaacaaacccatcttgtacacagacctggagctcaaatctcttctgctggaa
gcttatgtgaaaggccagcaggagttgctgtatgttgtcccctttgtggccaaagtcttg
gaatcaagtctgcggagtgtgatcttcagaccacagaacccttggactatgggtatcatg
aatgtactggctgaactccatcaggaacatgacttaaagctcaacctgaagttcgagatc
gaggttctctgtaagaatctgtctttggacatcagcgagctgaagccaggaaacctactg
agagacaaagagaagctcaagaacctggaggagcaactctctgcaccaaagaaagagacc
aagcctcctgaagagatgctgcctatagttacaacagtagatcccgttgcgtttacaaca
gcaccctcaactccagcaaccaccactacctgtacggccactgggccgcccacaccacag
ttcagctaccacgacattaacgtctatgccctggctggtctggccccacatatcaatatt
aatatcagcatcccactgctgcaggcccaccctcaactgaagcagtgtgtgagactagct
atcgagcgtgccgtacaggagctcgtgcaccccgtggtggaccgatccatcaaaatcgcc
atgaccacctgcgagcagatcgtcaggaaggacttcgccctggattcagaggagtctcac
atgcgcgtggccgcccaccacatgatgcgaaaccttactgccggcatggccatgatcacc
tgcagagagccgctgctcatgagcatcgccaccaatctcaagaacagctttgcggcagct
cttagggcacccacacctcaacagagagagatgatggaggaggcagctgcacgtatagca
caggacaactgtgagctggcatgttgcttcattcagaagacggcagtggagaaagccgga
ccagagatggataagagactggcaactgaattcgaactgaggaagcatgcccgccaagaa
ggccgtcgttactgtgaccccatggttctcacctatcaggctgagcgtatgccagagcag
atcagactaaaggtgggtggagtggaccctaaacagctggctgtttacgaggagtttgca
cgaaacgttccaggcttcctgcctagtaatgatctttctcagcctactggattccttgct
caaccaatgaagcaacaggcatggccggccgatgatgtggctcacatctacgacaagtgc
atttcagacctggagcagcaccttcacgcaatcccgccagccctggcgatgaacccacag
acccaggccatacgcagcctactggaggccgtagtcatggccaggaactctcgtgacggg
atcgctgccctggcccttttacagaaggctgtggagggtctcctggatgccacaagcggt
gctgatactgatctgttgctaagctacagagagtgccacttgatggtgctaaaagcctta
caggacggtcgcgcatacggcccacaatggtgcaacaaacaaatcaccaggtgcctgatt
gagtgcagggatgaatacaaatacaacgtcgaagctgtggagctgctcattcgaaatcac
cttgtcaacatgcagcagtatgatatacatctggctcagtccatggagaacgggcttaac
tacatggccgtagcgtttgcgatgcagctggtgaaactcctgctggtcgatgagcgcagc
gggagccacatcaccgaagccgatctcttccagactattgagacgctcatgaggaccagc
gcccactccagagccaatgcacctgaaggtttgccccagctgatggatgttgtccgttcc
aactatgaggccatgatcgatcgtcaccacggtgggcccaacttcatgatgcactctggg
atttcccaagcttcggagtatgacgacccaccgggcctcagagaaaaggcagagtatttg
ctaagagaatgggtcaacctgtaccactcggcagctgctgggagggacagcacgaaggcc
ttttctgcattcgttggccagatgcatcagcagggcatcctaaagaccgacgacctcatc
actcgctttttccggctctgcaccgagatgtgcgttgagatcagttaccgggctcaagcc
gaacagcagcaccccaccaccagccccgccatcatcagggccaagtgttaccacaacctg
gacgccttcgttcggctcatcgcactactggtgaaacactccggagaggccaccaacacg
gtcaccaaaatcaacctgctcaacaaggttctgggcattgtggttggcgtgctgattcag
gatcatgacgtgaggcagacggagttccagcagcttccttaccaccgaatcttcatcatg
cttctgttggagctcaatgcaccagagcatgtgctggaaaccatcaacttccaaaccctc
actgccttctgtaacaccttccacatcctgaggccaactaaagcacctgggtttgtatat
gcctggttggagctgatttctcatcgcatcttcattgccaggatgctagcacacacccca
caacaaaagggttggcccatgtatgcacagctgctgattgatttgttcaagtatcttgca
cccttcctaaggaatgttgaactcaacaaacctatgcaaattctctataagggaacgcta
cgcgtgctgctcgtcttgcttcatgacttcccagaattcctgtgtgactatcactatggc
ttctgtgacgtcatcccacccaactgcatccagctgagaaacctgatcctgagtgccttt
ccccgcaatatgaggcttccagaccccttcaccccgaatctgaaggtggatatgttaagc
gagatcaacatcgctccccgcatactcaccaacttcaccggtgtgatgccatcccagttc
aaaaaggatcttgactcttacctaaagacccgatcacctgtcactttcctttctgagctg
cgcagcaacctgcaggtgtccaacgaaccaggcaaccgctacaacatccagctgatcaat
gcgttggtgttgtatgtgggcacccaggccatcgcccacatccacaacaagggcagcact
ccctccatgagcaccattactcactcggcacacatggacatcttccagaacctcgcagtc
gacctggatacagagggccgctatctgttcttaaatgcgatagccaatcagctgcgttac
ccgaacagccacacacactacttcagctgtaccatgctgtatctgtttgcggaggccaat
gctgaagccattcaagagcagatcaccagggtccttctggagaggctgatcgtgaaccgg
ccgcacccgtggggtctgctcatcacctttattgagctgatcaaaaatcctgcctttaag
ttctggagccacgattttgtgcactgtgcccctgaaatcgagaaattgttccagtcggtg
gctcagtgctgcatgggacagaaacaagcccagcaggtgatggagggaacaggtgctagt
tag
DBGET
integrated database retrieval system
