Misgurnus anguillicaudatus (oriental weatherfish): 129438353
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Entry
129438353 CDS
T09481
Symbol
col4a3
Name
(RefSeq) uncharacterized protein col4a3 isoform X1
KO
K06237
collagen type IV alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04382
Cornified envelope formation
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04518
Integrin signaling
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129438353 (col4a3)
04518 Integrin signaling
129438353 (col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129438353 (col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129438353 (col4a3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129438353 (col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129438353 (col4a3)
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129438353 (col4a3)
Exosome [BR:
manu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129438353 (col4a3)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129438353 (col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129438353
NCBI-ProteinID:
XP_073719651
LinkDB
All DBs
Position
24:30159671..30198142
Genome browser
AA seq
1662 aa
AA seq
DB search
MKMASYLLRMMLVGLFLFALPTPAMTDGDCVCSGKSQCDCHGIKGNAGDPGFPGIDGSPG
IRGHQGNEGPPGESGPKGSMGFPGYAGLKGSRGTPGIAGYFGPPGLPGHPGKQGPRGRSG
YPGCNGTKGDPGIPGYGGLMGAPGQRGIPGMQGPEGHTFYFPTPEKINGPRGLPGRPGRD
GEKGRRGSPGLPGPIGPEGPKGAYGLPGIPGPQGVKGTEGRSMGIPGPSGPKGNKGLPGI
PGDKGVKLFVRGPKEPKGDQGDPGDVGCLGLSGRQGLPGPKGMKGDRGEPGNPGKDGKDG
LRGEVGQPGERGDVGYQGITGINGEWGQKGDRGPPGLPGEVIITNGNVKGPKGFPGPPGP
PGLQGSEGFIGFPGSPGPPGPSIPGPQGRPGPPGFRGIKGDMGEPAAYISGPKGLDGPPG
ERGPPGDPGPPGTPNVKGRLGPRGLKGEKGLIGLEGFRGDAGKPGEQGDLCRLCSFFNAD
PGPPGLRGNPGQPGEPGGEGGQGSKGSQGLQGPQGAPGNQGSSGCPGVPGPQGSKGDPGS
VTAIGEKGQEGNSGAAGPAGIHGRDGRPGNPGLKGPPGAKGNPGPPGLKGNRGDPGLNGE
PGRTGPMGIQGAMGVGQPGPPGAKGSLGPVGRPGNPGEPGEKGSSGSVEMIRGDPGEPGR
HGPTGQPGLPGIKGYIGVPGFPGKTGVKGDKGLSIPGSPGGPGPKGDKGLKGMSGPPAIG
SVGRPGPPGPPGLPGLKGDKTFGTPGSVGRQGMPGDEGNLGETGAFGAPGSRGCPGQGGR
DGPPGDPGQRGLDGAPGVDGVPGCCSPGAKGDQGPPGSNGVDGPPGLRGPKGPQGETGSP
GQGLPGPTGIAGIPGKNGETGSNGQQGPKGFRGRDGLAGFPGTRGNSGIPGSIGSPGATG
NRGQPGPPGSKGFMGSNGVPGNRGKSGELGDRGAIGPKGQPSSIVAQGDPGDPGLPGLTG
FPGSKGDKGIPGNYGNFGKNGLPGNPGPPGPPGDPGLRGSPGNPGFEGCIGDPGIVGFPG
VKGNKGSPGVRGGSGTPGNQGQNGPKGLKGEPSLPGPGPPGSPGPKGEPGRPGDAGDKGE
KGISGNQGPPGPAGRPGDRGEAGVPGGPGPLGPPGEKGLDGLSGPAGYPGPSGAPGGPGS
AGNPGLPGPRGEQGRDGIPGPAGTKGDRGPTINGIPGPPGIKGEKGSKGNPGPQGPCGPP
GPYGPPGDIGPPGPPGVSGPRGCKGAPGICADGPKGERGPLGQSGLQGLPGPRGPPGNPG
PGLKGDKGIVGPLGLVGGPGNIGEQGVPGEPGRDGDPGRRGAKGDYGPMGFMGPVGQKGN
FGPNGAPGLKGHKGPPGREGPKGCDVVAEVITTPGDPGFPGVVGEKGRQGEPGPPGGPGP
QGTQGRKGAMGPAGAPGGSGVPGPRGDMGPLGKQGDRGLSGEVGRKGALGPPGPLLDAQT
DSILFTKHSQKITVPTCPSGSRLLYEGYSLLFINGNNRGHGQDLGTLGSCMQRFSTMPFV
VCNPDDTCRYASRNDYSYWLSTDKPASSETDLISGEVLEQYISRCAVCEAPGNVIAVHSQ
TNQIPQCPGGWRSLWQGYSFVMQTAAGAEGSGQPLVSPGSCLEEFRRIPFIECHGRGTCN
FFPDSYSYWLASLDPDRMFSIPVPQRTIQPTLISRCRVCMKL
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcttcttacttattgcgaatgatgctggtcggactgttcttgttcgcactt
cctacaccagcaatgactgatggggattgtgtttgcagtggaaaatcccagtgtgactgt
cacggaatcaaaggcaatgcgggtgatcctgggtttcctggaatagatggttcaccagga
atccgaggacatcaaggaaatgaaggccctcctggggaatccggtccaaaaggaagtatg
ggatttccaggttacgccggacttaaaggctctaggggaactccagggattgcaggatac
tttggtccaccaggacttcctggtcatcctgggaaacaggggcctaggggtcgttctggt
taccctggatgcaatggcacaaagggtgatcctggtatcccagggtatggaggattaatg
ggcgctccggggcagcggggaattcctgggatgcaaggacctgagggacataccttttac
tttccaactcctgagaaaatcaatggacctcgtggacttcctggacgtcctggcagggat
ggagagaaaggtcggcgtggatcaccggggttaccaggaccaattggaccagaaggccca
aaaggcgcatatggattacctggaattcccgggccacaaggagtgaagggtaccgagggt
cgaagcatgggaatacctgggcccagtggcccgaaggggaacaagggtttgcctggtata
ccaggagataaaggtgtaaagttatttgtaagaggaccaaaagagcctaagggtgaccag
ggagatcctggagacgttggctgccttggattatctggtcgtcagggccttcctggtcct
aagggaatgaagggggacagaggggagcccgggaatccgggtaaagatggtaaggatggg
ctgcggggcgaggtcggtcaaccgggtgagcgtggagatgtggggtatcaaggaattact
ggaataaatggagaatggggtcagaaaggtgaccgcggcccccctggtctcccaggagag
gtcattataacaaatgggaacgttaaaggtcctaaaggttttccaggcccaccaggacct
cctggtctccaaggtagtgaaggtttcatcggctttccaggaagtccaggtccaccaggg
ccgtctataccgggacctcaaggaagaccaggacctccagggtttaggggtataaaaggg
gacatgggggaacctgcagcttacatcagtggacctaaaggattagatggaccaccagga
gaacggggacccccgggtgaccccggacctccaggaactccaaatgtcaaaggccggttg
ggaccaagagggttaaagggtgagaaaggcctaataggtctcgagggtttccgtggagat
gctggaaaaccaggagagcaaggagatttgtgcaggttgtgttctttctttaatgctgac
cctggacctccaggactacgtggaaatcctggccagcctggagagccaggtggtgagggt
ggtcaaggttccaaaggatcccaaggccttcaaggtccacaaggtgctcctggtaatcag
ggttcatcaggttgccctggcgttccagggccccaagggtccaaaggagacccaggttca
gtaactgcgattggggaaaagggccaggaaggaaactccggtgcagctggaccagcaggg
atacatgggagggatggcagacctggcaaccctggcctcaaaggaccaccaggagctaaa
ggaaacccaggtcctccaggccttaaaggaaaccgtggagacccgggacttaatggagag
cctggtcgcacaggtccaatgggcatccagggggcaatgggtgttggccaaccagggcca
cccggagcaaaagggagtttgggtccagtcggccgacctggaaatccaggagaaccaggt
gagaaaggatcttctggatcagtagaaatgatccgtggagacccaggagagcccggccgt
catggtccaactggtcaaccaggacttccaggcattaaaggctatattggggttcctgga
ttccctggaaaaactggggttaaaggggataaaggactgtcaataccaggatctcctgga
ggtcctggtcctaaaggtgataaaggtttgaaagggatgtcaggtccacctgctattgga
agtgtagggcgtcctggccccccaggaccaccaggacttccaggcctaaagggggataaa
acattcggcactccagggtccgtgggtcggcaggggatgccaggagatgaaggaaacctt
ggggaaacgggagcctttggtgcacctggatcacgtggatgtccaggtcaaggaggaagg
gacgggccaccaggagaccctggtcagcggggtttggatggtgcgcctggagtcgacggt
gttccaggatgctgctctccaggggccaaaggtgaccaagggcctccaggatccaacgga
gtagatggacccccagggctgaggggcccgaaggggccacagggtgaaaccggatcacct
gggcaaggtttacccggtccaacgggtatcgctggcatacctgggaaaaatggagagaca
ggttccaacggccaacagggaccaaaaggtttcagaggtcgagatggcttagcaggtttc
ccaggtacacggggaaattctggaattcctggaagcattggttcacctggagcaactgga
aaccgtggacaacctgggccccctggatctaaaggtttcatgggtagcaacggagtgcca
ggtaatagaggaaaatccggagaattaggagacagaggagccattggtcccaaaggacaa
ccatcaagcattgtcgctcaaggggatcctggtgaccctggcctaccaggtcttactggt
tttcctggttctaaaggagacaagggaattccgggcaattatggtaattttgggaagaat
ggacttcctggaaatcctggcccaccaggtcctccgggtgaccctggtttgagaggcagt
cctggaaatccaggttttgagggctgcattggggatccaggaattgtgggatttccaggt
gtaaagggcaacaaaggatcacctggagttcgtggggggtccgggactcctgggaaccag
ggccaaaacggaccaaaggggctgaaaggtgaacccagcctgcctggaccagggcctcca
ggatcacctggtccaaagggtgagcctggacgtccgggggatgcaggtgataaaggtgaa
aagggtatatctgggaatcaaggtccaccgggtccagcagggcgtcctggggacagagga
gaagctggagtaccaggaggtccaggacccttaggacctcctggtgaaaagggtttagat
gggctttcaggtccagctggatatccagggcccagtggtgcaccaggtggtcctggttcg
gctgggaatcctggacttccaggaccccgcggagaacaaggcagggacggtattcctggg
ccagctggaacaaaaggagacagaggcccaacaataaatgggattcctggtccacctggt
atcaagggtgagaaaggttctaaaggcaatcctggaccccaaggaccatgtgggccacca
ggaccctacgggccacctggagacatcggtcctcctggtccacctggagtatctggacca
cgtggatgtaaaggtgcacctggaatctgcgctgatggtccaaaaggggagcgaggaccc
ttaggacaatctggccttcaaggcctaccgggtccacgtggccctcctggtaacccaggt
ccaggcctgaagggagataaaggcattgttggaccactgggacttgtaggagggcctggg
aatatcggtgaacaaggtgttccaggtgaaccaggtagagatggagatcctggacgcagg
ggtgccaaaggagactatgggcctatgggtttcatggggccagttgggcagaaaggaaat
tttggtcctaatggcgctccaggactaaaaggtcataaaggacctcctggacgtgaaggg
cccaaaggttgtgatgttgtggccgaggtcatcactaccccaggagaccctggttttccc
ggagtagttggtgaaaaggggagacaaggagaacctggacctccaggaggaccaggtcca
caaggaacccaagggcggaaaggagccatgggtccagctggagctcctggaggctctgga
gtccctggcccgagaggagacatgggtccactaggaaagcaaggtgatcgtggtttgtca
ggtgaagtgggtcgtaagggtgcgcttggaccacctgggccactactggatgcccaaacg
gattcaatcctttttaccaagcatagtcaaaagataactgtgccaacctgccccagtgga
tcgagacttctgtatgaaggatattcgctactcttcatcaacggcaataaccgtggacat
gggcaagacctaggaactcttggaagctgtatgcaaagattttccaccatgcctttcgtg
gtgtgtaatcccgacgacacctgccgctacgcctctcgaaacgattactcctattggctg
tctacagacaaaccggcatcaagcgagacagatctgatctctggtgaggtactggaacag
tacatcagcagatgtgcagtgtgcgaggcgccaggtaatgtaatagcagttcacagccag
acaaatcaaatcccacagtgccctggaggatggaggtctttgtggcaaggttactccttt
gtaatgcaaacagctgcaggtgcggaaggatccgggcagccgctggtctctcccggttcg
tgtttggaagaattccggaggattccgtttatagagtgtcatgggcgtggcacctgtaac
ttcttccctgattcctacagctactggctggcatcgctcgaccccgacagaatgttcagt
ataccggtccctcagagaacaatacaacctactctcatcagccgctgtcgggtctgtatg
aagctgtaa
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