Misgurnus anguillicaudatus (oriental weatherfish): 129442211
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Entry
129442211 CDS
T09481
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129442211 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129442211 (ndc1)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129442211 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
129442211
NCBI-ProteinID:
XP_073731602
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All DBs
Position
2:25855054..25864237
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AA seq
684 aa
AA seq
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MTKHDKMFSLKQNCWFIRKVVIWRALASIAWTVILLPVTTALFVFVSRFCLFHPVQWIIE
CTSLLSAPSTIFSLVVLCAVVLITGIFNLEFYTLVPSIPCSRVALLGAVLHPWQCVHSLV
YCTMGMLMMWCAAVIIGGRYSALGSPCRASESGEIGEPMTCLNEYHLFLLLAGAFVGYSH
SFLGVVQNMYYVSFQPIQQYKYLRFKGSLPMVVKCSVIQSLYSARNFIALYFFFGYVPKA
WISSTLNLHIDRSVQPLDSFTGLLDFSLLYHLSISGTFLYLTWYITVLLFRIYVTEAYSF
PVQPTFTEDAEQCLPKVLSEKNSLVMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHN
WNAISKECMSLLSELTLRLVAHQDAVASNGRIKSQSTSSDTKSGSSGSSVILGTEDLPET
PRPNMSLRTPGSVFLKSSMAGVHSPLTAPFTPDLDSPYASPAIRRLAGKQDAQSPWFGSL
QSPHVMRRGPKLWSSASTDSQANGSPPGSPTAVTSSPLAEPNQKPSFLAQWLQNRKEQVK
SFLAKRVLVVYLFNKLPEASSQALFADSQAHIWALQGLSHLVAASFSEDQFGVVQTTLPN
ILSCLVVLLEAVDRHFKLPHASSKPVRAACSMGDSTYKTLRFALRAALKSAIYRMTTTFG
DHLNAVNISTEHRKRLQQFLEFRE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcatgacaaaatgttttcacttaaacagaattgttggtttataagaaaggtg
gtcatatggagggcactggcgagcattgcgtggacagttatccttttacctgtgacaact
gcactttttgtgttcgtcagcagattttgtctgtttcatcccgtacagtggattatagaa
tgcacgagccttctttctgccccaagcaccatcttttcccttgttgtgctgtgtgcagtt
gttctgatcactggcatttttaacctggagttctacactttggtgccttctatcccatgt
tcccgtgtggctctcctgggggcagtgcttcacccatggcagtgtgtccattctttagtg
tactgcaccatgggcatgttgatgatgtggtgtgctgctgtaatcattggtggacgttat
agtgctcttggaagtccttgcagggcaagcgagagcggtgagatcggtgaacccatgacc
tgtctgaatgagtatcatctctttctactcctggctggggccttcgtgggatacagtcat
agttttttgggagtggttcaaaatatgtattatgtgtcctttcaacccatacaacaatac
aagtacctccggtttaaaggctcccttcccatggtggtgaaatgcagtgttattcaatcc
ttatattcagccaggaacttcattgcactctatttcttttttgggtatgttcccaaggcc
tggatttcaagcacacttaatctgcatatagacagatctgttcagccattggattcattt
accggacttttagatttctccctcctctaccatctgtccatcagtggtaccttcttgtac
ctaacctggtacatcactgtgcttctcttcaggatctacgtaacagaggcctacagtttt
ccagtgcaacctacatttactgaggatgcagagcagtgtctgcctaaagtcctgtctgaa
aaaaactctttagtcatgaagtttttggccctgcaggatttagcgctcttatcacaacac
tccccttcacgcagacaggaagtcttcagtctcagtcaaccaggcggtcatcctcataac
tggaatgcgatcagtaaagaatgcatgtctcttctgagtgaactcacactcagactggtg
gctcatcaggacgcggtcgcctctaatggcagaataaaatcccaatctaccagcagtgac
accaaatctggctcttcaggcagttcagtaattttagggacagaggacttgcccgagaca
cctcgaccaaatatgtcactcaggacacctggatctgtcttcctcaagtcatcaatggcg
ggtgtgcacagtcctctgaccgctcctttcaccccagatctggacagcccttacgcctca
cctgctattcgccggctggctggcaaacaggatgctcagtcgccctggtttggctctctg
cagagccctcatgtcatgaggagaggccctaaactgtggagtagtgcctccacagactca
caagccaatggcagtcctcctggctctcctactgctgtaactagttctcctctagccgaa
ccaaatcagaaacccagcttcctggcccagtggctacagaacagaaaagagcaggttaaa
agctttttggcaaaacgggtgctggtagtgtatttatttaacaagcttccagaagcctcc
agccaagctctgtttgctgacagccaagctcatatctgggctcttcaaggattatctcat
ctggtggcagcctctttctctgaggaccagtttggtgtggtgcagactacattgcctaac
attctcagctgcctagtggttctgttagaggctgttgatagacactttaaactgcctcat
gcctccagcaagcctgtgagggctgcctgcagtatgggtgactccacctacaaaactcta
aggtttgcattacgagctgcacttaaaagcgctatctacaggatgaccaccacttttgga
gatcacttgaatgccgtgaatatatcaacagaacatcggaaaaggcttcagcagtttttg
gagtttcgagaataa
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