Misgurnus anguillicaudatus (oriental weatherfish): 129450253
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Entry
129450253 CDS
T09481
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
manu04040
]
129450253 (scn1lab)
Ion channels [BR:
manu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129450253 (scn1lab)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
RhlB
Motif
Other DBs
NCBI-GeneID:
129450253
NCBI-ProteinID:
XP_073726831
LinkDB
All DBs
Position
8:33341136..33397930
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AA seq
2001 aa
AA seq
DB search
MAAQLLVPPGPDSFRPFTPESLAAIERRIADEAAQRPKGGRRPDEDDENGPKPNSDLEAG
KSLPFIYGDIPPNMVSVPLEDLDTYYSNQKTFIVLNRGKAIFRFNATSAVYILSPFNPLR
RISIRILVHSMFSFVIMCTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CIGKFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRIPINGTENMTDRFNYSLEM
PSSNFNWTEYISDKNNYYYLPGRRDALLCGNSSDAGQCPEGFLCIKAGRNPDYGYTSFDT
FGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYD
EQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGLSEESSSGGSR
LSSKSAKERRNRRKKRKQREEEEKADQEKFHKSASEDSIRRPGFRFSIDANRLSYEKKCS
TPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGSLFV
PRCIERRSSTVSHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGRLLPEGTT
TESDARKKRSGSHQPSDYLDETVARKRALSVASILTNTMEELEESRQKCPPCWYKFANSF
LIWDCCPTWLKVKQIMNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTKEFNHVLSVGNL
VFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKISE
DCELPRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLN
LFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGIALIKSALRQLIQSLCLAGGKPR
ALDEEKPLDDLHSDGKENCLSNHAPVAVDLTTDYLKGGCVSPGNGVEGHVKYEIGECDYM
SFIHNPTLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPIDTVLSSSEGSTVDIR
PPGEGAESVELEPEESLDPEACFTEGCVMRFQCCQVDVEQGHWKSWWILRKTCFIIVEHN
WFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILEMLLKWVAYGFAK
YFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVN
ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCINITNDEMFPITVVNNESECRA
LIKNNETARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEQQPKYESNLY
MYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPTNVFQGLVFDLITKQAFDIVIMILICLNMVTMMVETDDQTVEMDNILYWINL
VFIVLFTGECMLKMISLRQYYFTVGWNVFDFVVVILSIVGMFLSDMIEKYFVSPTLFRVI
RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKHE
AGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPILNKQDPDCDSETEHPGSSYRGDCGN
PSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPD
ATQFVEYSKLSDFADALDPPLRIPKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVLGE
EGEMDALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSAVIIQRAFRRYRMRKTIKKA
CEVYRQHLKDGVVPIPEKEVLVIGKFHENSASDKTDMTPSSASPPSYNSVAKSEKDKYEK
EKREKEDKAKDAKDRKKCAMN
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagcttctcgttccacccggacccgacagcttccggcccttcacgcccgag
tctctcgctgctatcgagcgccgcatcgcagatgaggcagcccaacggcccaaaggcggg
agacggcccgatgaagatgacgaaaacgggcccaaacccaacagcgatctggaggcgggc
aagtccctgcccttcatctacggagacattccgcccaacatggtgtccgtcccgctggag
gacctggacacttactacagcaaccaaaaaacctttatagtattgaatcgcgggaaggcc
atattccgttttaacgctacgtcggccgtgtacattttgagccccttcaatcctttgagg
agaatctccatcaggatcctggtgcattcgatgttcagttttgtgatcatgtgcacaatc
ttgaccaactgcgcctttatgaccctcagcaatcccccagactgggccaaaaatgtggag
tacaccttcacagggatctacacattcgagtcccttattaagatcctggcacggggcttc
tgcattgggaagttcactttcctgagggatccctggaactggctggattttagcgtcatc
ttgatggcgtatgtaactgagtttgtaaacctaggcaatgtgtcagctctccgcactttc
agagtgctcagagctttgaaaactatctcagtcatcccagggctgaagaccatcgttggc
gctctgatccagtccgtgaagaagctgtcagacgtgatgatcctgacggtcttctgtctg
agcgtgtttgctctgatcggactgcagctcttcatgggaaacctgaggcagaagtgtgtg
aggataccgatcaatggcacagaaaacatgacagaccggttcaactacagcttagaaatg
cccagctccaacttcaactggacggagtacattagtgataagaacaattattattacctc
ccaggccgcagagatgctttgctgtgtggaaattctagcgatgcagggcagtgtccagag
ggcttcttatgcattaaagctggtcgtaatcctgactacggctacacaagctttgatacg
ttcggctgggccttcctctcgctattcagactcatgacacaagacttctgggaaaatctc
tatcagcagaccctacgtgcagctggaaagccctacatgattttctttgtgctggtaatc
ttcctgggctccttctatctggtaaatctcatcctggctgtggtagccatggcatacgat
gagcaaaaccaggccactatagaggaggcccaacaaaaggaggaagaatttcaagccatg
ctggaacagctaaagagacagcaggaggaggcacaggttgccgcagcagcagcaacagag
agcggggagtacagcggaagggggggcttgtcggaggaaagctcctccggagggtccaga
ctcagctctaagagcgccaaagagcgacgaaacaggaggaagaaaagaaaacaacgggaa
gaggaggagaaagccgaccaggagaagtttcataagtctgcatcagaggacagcatcaga
cgacccggttttcgcttctccatagacgctaaccgactctcttatgagaagaagtgctcc
actccaaatcagtctctcctcagcatccgcgggtctcttttctccccgaggagaaacagc
cgcgcaagcctgtttagttttcgcgggcgagctcgagacttcggctcagagaacgatttt
gctgatgacgagcacagcacattcgaggacagcgacagtcggcgcgggtcgctcttcgta
cctcgctgcatcgagaggcggagctccaccgtcagtcactgtagcctggccccaaggatc
atgctgccagccaatggaaagatgcactgcaccgtagattgcaatggcgtggtctctctg
gtgggtgggacatctgtgccaacatcaccaatcggacgcttgttaccagagggcacaacc
actgagtctgacgcacgcaagaagcgttcgggatcgcaccagccgtcggattatctagac
gagacggtcgctagaaaaagagctttgagcgtggccagcattctcacgaatactatggaa
gagctcgaggaatcacggcagaagtgtcctccttgctggtacaagtttgccaacagcttt
ctgatctgggactgctgtcccacatggttgaaggtgaagcagattatgaacatgatcgtg
atggatccattcgtagacctggccataaccatctgtattgtcctcaacaccctcttcatg
gctatggaacactatccaatgacaaaggagttcaatcatgtgctgtcagtgggaaatttg
gtgttcactgggatcttcacggcagagatgtgtctgaaggtaatcgcactagacccgtat
tactactttcaggagggctggaacatctttgatggcatcatcgtgagtctgagtctcatg
gaattgggcttggccaatgtggagggactttctgtgttgcgctccttcagactgttacga
gtctttaaactagcaaagtcctggcccactctgaacatgctgataaagatcatcggtaac
tcagtcggtgctttggggaatctgaccctcgtcctggccatcatcgtcttcatcttcgcc
gtggtgggaatgcagctgttcggaaagagctaccgcgaatgcgtctgcaagatctcagag
gactgcgagttgccgcgctggcacatggacgattttttccactccttcctgatcgtgttc
cgggtgctttgcggcgaatggatcgagaccatgtgggactgtatggaagtggccggacag
tcgatgtgtctcgttgtctttatgatggtcatggtcattggaaatctggtggtgctgaat
ctgttcctggccttgctcttgagctctttcagtgccgacaacctggcagccacagacgac
gacagcgaaatgaacaacctgcagatcgcagtgggcagaatacagaaaggcatcgcgctg
atcaagtcggccttgcggcagttgatccaaagcctctgcctggccggcggcaaacctcgc
gctctagacgaggagaaacccctcgacgaccttcacagcgacggcaaggagaactgcttg
tccaatcacgctcccgtcgccgtcgatctcaccacagactatctgaagggaggctgcgtt
tcccccggcaacggggtggaaggtcacgtgaaatacgaaatcggggaatgcgactacatg
tcgttcatacacaatcccacgttaacggttacggtgccgattgcggtgggagagtcggac
tttgaaaatctcaacacggaagattttagcagcgattcgtctgacgtggagggaagtaaa
gagaagctgcctatagatactgtactgagttcctcagaagggagcacggtggatatccga
cccccgggagaaggggcggagtctgtcgagttggagccagaggagtccctagacccggag
gcctgtttcactgaaggctgtgtgatgaggtttcagtgctgtcaggtcgatgtcgagcaa
ggacactggaaaagttggtggattctcaggaaaacctgctttatcattgtggagcacaac
tggtttgagtccttcatcatcttcatgattttacttagcagtggagcactggcctttgag
gacatttacatcgagcagcgcaagacgatcaagacagtgttggagtacgcggataaagtc
ttcacatacatcttcattttggagatgcttctgaaatgggttgcgtacggcttcgccaaa
tacttcaccaatgcctggtgctggctcgatttcctgatcgttgatgtgtctttggtgagt
ctggtagcaaatgctcttggttactcagaactaagtgcaattaagtccctgagaacactg
cgtgctcttagacctctgagagcattgtcacgctttgagggaatgagggttgtggtgaac
gctctgttgggagctattccttccatcatgaacgtcctgctggtgtgtctgatcttctgg
ctgatcttcagcatcatgggggtgaatcttttcgctggaaaatactaccactgcattaat
attaccaacgatgagatgtttcccatcaccgtggtcaacaatgagtcagaatgccgagcc
ctgatcaaaaacaacgaaacggcgcgctggaaaaacgtgaagattaatttcgataacgtg
ggagccggatacctggcgctactgcaagtggccacatttaaaggatggatggacattatg
tatgcggctgtggattctcgtgatttggagcaacagcccaagtatgaatcgaacctatac
atgtatctgtactttgtcatcttcatcatctttggctccttcttcaccctcaatctcttc
attggtgtcatcatcgataacttcaatcagcagaagaagaagataagaggacaggacatc
ttcatgacagaagaacaaaagaaatattacaatgccatgaaaaaacttggatctaagaag
ccacagaaacccattcccaggcctacgaacgtgtttcagggcctcgtcttcgatttaatc
accaaacaagcctttgacattgtcattatgatcctgatctgcttgaacatggtgaccatg
atggtcgaaactgatgaccagacggtagaaatggacaacatcctgtactggatcaacctg
gttttcatcgtcctcttcactggagaatgtatgctcaagatgatatccctgcggcaatac
tacttcaccgtgggctggaatgtgtttgactttgtggtggtgattttgtcaattgttggc
atgttcctctctgacatgatcgagaaatactttgtatcgccgaccttatttcgagtcatc
cggcttgccagaattggccgcattcttcgtctcatcaaaggagccaaaggcattcgtact
ctcctgtttgccttgatgatgtcacttcctgccttgttcaatattggccttctcctcttc
ctggtcatgtttatctatgccatcttcggaatgtctaactttgcctacgtgaagcacgag
gcggggatcgatgacatgttcaacttcgagacgttcgggaactcgatgctctgcttgttc
cagatcaccacctctgcgggttgggacggccttctggcgcccattctgaacaagcaagat
cccgattgcgacagcgaaactgagcacccgggcagctcgtaccgcggcgactgcggaaac
ccctcggtcggcatcttcttcttcgtgagctacatcatcatttgcttcctgatcgtggtg
aacatgtacatcgccgtcatcttggagaacttcagcgtagccacggaggagagcgcagaa
ccgctcagcgaggatgactttgaaatgttctacgaagtctgggagcgattcgaccccgac
gccacgcagtttgtggaatacagcaaactttctgactttgcggacgctctggatcctcct
ttacgcattcccaaacctaacaagatccagctgatagccatggacctacccatggtcagc
ggcgatcgaatccactgcctggacatcctgttcgctttcacgctaagggtcctgggcgag
gagggtgagatggatgccctgagaggacagatggaggatcgattcatggcctccaatccc
tcgaaagtctcttacgagcccatcacgacaacccttcgccgcaaacaggaggagatgtcc
gccgtcatcattcagagggccttccgacgttaccgaatgaggaaaacgataaagaaggcc
tgtgaagtgtaccgccaacatctgaaggatggggttgtacccatcccagagaaggaggtg
ctcgttatcggaaagtttcacgagaactctgcgtcggacaaaacggacatgactccatcc
tctgcctctcctccatcttataacagcgtggccaagtcagagaaggacaaatatgagaaa
gaaaagcgagagaaggaagacaaagcaaaagatgcaaaggacagaaaaaaatgtgcgatg
aattga
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integrated database retrieval system
