Misgurnus anguillicaudatus (oriental weatherfish): 129451886
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Entry
129451886 CDS
T09481
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
manu04040
]
129451886 (scn1laa)
Ion channels [BR:
manu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129451886 (scn1laa)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
PFF1_TM
IQ
Motif
Other DBs
NCBI-GeneID:
129451886
NCBI-ProteinID:
XP_055071351
LinkDB
All DBs
Position
17:40720686..40777259
Genome browser
AA seq
1977 aa
AA seq
DB search
MAQTLTPPGPKSFRLFTRESLKAIESRIAEENAKKSKDKQERNKDNGKPNSGLEAGKKLP
FIYGELPRKMASTPLDDLDRFYSSKRTFIVVNKKNTINRFNASPALYIFSPFNPLRRIAI
KILVHSLFSIFIMFTILANCAFMTYAQPPDWAKNVEYAFTGIYTFEALIKIVARGFCVGQ
FTFLRDPWNWLDFIVIVMAYVTEFVDLGNVSALRAFRVLRALKTISVIPGLKTIVGALIQ
AVKKLSDVMILTLFCLSVFALVGLQLFMGSLRHKCVKISPNSTLESFGSWAENCSKDMTM
DCKNYIDDSSNYYVPPGLKKPVICGKSHDAGQCPDGYFCTKAGSNPDYGYTSFDSFGWAF
LSLFRLMTQDYWENLYQQTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQNQA
TIDEALKKEEEFNSMLEQLRRKEEEEAAAAVSNLEELGEVTSDNSSDTSKLSSKSAKERR
NRKKKRQREGEKDDDSKKEGSVKRTSFHITADRNIRRSYERTYNSPCQSPLSIQGSVLTP
RRDSKSSVFSYRDFLRSENNYADDEQSMCEETDSRRDSPFLLCHPERLYSTVSNGSLTPH
LLRPSNGKVRYVVDSNGIVMMSGDGSQPNSPSGLLTPSRKRAMFEDFGVDTDEENRGRCN
SQRFSRSLLHDQSARKRALSIASGSNNPSDCKETINPRRTHFEETESMDVWKQKCLDWWY
EFAESYLIWDCSPTWLKIKDIVHMIVMDPFADLFITICIVINTVFMAMEYYPMENDFANI
LSTGNLVFIGIFTAEMILKIIALDPYTYFQEGWNIFDSVIVTLSLLELSLQNVYSGMGIL
RPFRLLRVFKLAKSWPTLNMLIKIIGNSIGAMSNLTLVLAIIVFIFAVVGMQLFGKSYGD
CVCKISDDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMQVAGQPMCLIVFMMVMVI
GNLVVLNLFLALLLSSFSADNLTVTGEEAEKNNLQIAVGRIKNAFAFVKVRLHSFFSSGC
VKRRKKKRKSVHANDSKEVNDNANHTALELLQKTTETDTASETEHIISNPSLTISVPIAE
EESDFECLNTEDFSSLTSDLEEDKEELTDISSSEGSTVDLRHHGHVKQDGEVSVDFDKEE
STDPDACFTAGCVRRCPCCQVNVDKGFWKTWWMLRQACYNIVEHSWFETFIVFMILLSSG
ALAFEDIYLDSRKTVKIILEYADKVFTYIFILEMLLKWIAYGFAKYFTNAWCWLDFIIVD
VSLVSLVANALEYSELSAIKSLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIINVLLV
CLIFWLIFSIVGVNFFAGKFYECVNITTNERLPISMVNNGTDCKQMNNETRWKNLKINFD
NVGNGYLALLQVATFKGWMPIMYAAVDSRNQQEQPKYEVNLYMYVYFVIFIILGAFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKIQGCIFD
LVTNQAFDIFIMILICLNMVAMMVETDNQSNEMESVLYWINLGFIVLFTGECVLKMFSLR
HYFFTVGWNVFDFIVVILSIVGMCLSNVIEKYFVSPTLFRVIRLARIGRVLRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSSFAYVKKTDGIDEMFNFETFGNSMLC
LFQITTSAGWDGLLAPMLNTKPDCDPNKTFTGSNVKGDCGNPAVGIFFFVSYVIICFLVV
VNMYIAVILENFSVATEESAEPLSEDDFDRFYEVWEKFDPKATQFVEYRNLSEFADTLDP
PLRIPKPNRLQLISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASN
PSKVSYEPITTTLRRKHEDMSAAVIQRAFRTHKIRHHMKKGSNALREIKHQNGKVPRKES
VVNENFNDVAISENSDLTPSTSSPPSYDSAAPDGKNKYETDKREREVKGKDNAGKND
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacgcttactccaccaggaccgaaaagtttccgtctgttcacccgtgagtct
ctcaaggccatcgagagccggatcgcagaggaaaatgccaagaagtcgaaagacaagcag
gagagaaataaggacaatgggaaacccaacagtgggctggaggctgggaagaaactgcca
tttatatatggagaacttcctagaaaaatggcctccacaccattggatgacctggaccgg
ttttacagcagtaaaagaacttttatagtagtgaacaaaaaaaacaccatcaatcgtttc
aacgcctcacctgccttgtacatcttcagtcccttcaatcctttgaggagaatagcgatt
aagattttggtgcattcattatttagcatatttataatgttcaccatcttggccaattgc
gctttcatgacctatgcacaaccgccagactgggccaagaatgtggagtacgcattcact
gggatttacacttttgaagcactaataaagattgttgccaggggcttctgtgtgggacag
ttcacatttcttagagacccgtggaactggttggatttcattgttatagtcatggcatat
gtaacagagtttgtggatctgggtaatgtctccgccctgagagcattcagagttctacga
gccctgaaaactatatcggtcatcccagggctgaagacaatcgttggagctttgatccag
gctgtcaagaagctgtctgatgtgatgatcctgacccttttttgcctaagtgtctttgct
ttggtcggactacagctcttcatgggatctttaagacataaatgtgtgaaaatctcaccc
aattccaccctggagtcatttggtagctgggcggagaactgtagcaaagacatgacaatg
gattgcaaaaattatattgatgattcaagtaactattatgtcccaccaggacttaaaaag
cctgtgatctgtggaaaaagccatgatgctgggcagtgtccagatggatatttctgtact
aaagcaggttccaatccagattatggttacaccagctttgatagcttcggctgggccttt
ctctccttgttcagactgatgactcaagattactgggagaatctttaccaacagactctt
cgggctgcagggaagacctacatgattttctttgtgctggtcatctttctggggtccttc
tacctgataaacctcattttggctgtggttgccatggcatatgatgaacagaaccaagcc
accatcgatgaggctctgaaaaaagaggaagagtttaattccatgcttgagcagctcagg
agaaaagaagaggaagaggcggcagccgctgtgtccaaccttgaggaactgggcgaagtg
acatcggacaattcctccgatacgtccaaactaagctcaaaaagtgctaaagagagacgc
aaccgcaagaaaaagagacagcgtgagggggagaaagacgacgactcaaagaaggaagga
agcgttaagaggaccagcttccacatcacagccgacagaaacatccgtcgttcttatgaa
cggacttataattctccatgtcagtcccccttgagtattcagggttcagttttaacacca
cggcgtgacagcaaatctagcgtcttcagttaccgcgacttcctgcgttcagaaaacaac
tacgccgacgatgagcagagcatgtgtgaggagaccgatagccggagggattcgcccttt
ctgctgtgtcatcccgaacgtctctacagcaccgttagcaacggcagtctgacgccacat
ttgctgcgaccctctaacggaaaagtgcgatacgtggtcgacagcaatggcatagtgatg
atgtcaggtgatgggtcgcaacccaactccccctctggactgctaacgccatcccgaaaa
agggccatgtttgaagactttggtgtggacacggatgaagaaaacagaggaagatgcaac
tcacagcgcttttcgcgatctcttctacacgaccaatcagcacgcaagagagctctgagc
attgccagcggctcaaacaacccttctgactgtaaggaaaccataaaccctagacgaaca
cactttgaagaaactgagtcgatggacgtgtggaagcagaagtgcctggattggtggtac
gagtttgcggaaagctatctgatctgggattgctcccccacatggctgaagatcaaggat
attgtccacatgattgtgatggacccttttgcagacctcttcatcactatttgtattgtg
atcaacacagtgtttatggccatggagtattatccgatggaaaacgatttcgcaaacatc
ctttctactggcaatctagtgtttattggaatctttacagcagaaatgattttaaagatc
attgctttggacccgtatacgtattttcaggaaggctggaatatctttgacagcgtcata
gtcactttgagtcttctggagctttcccttcagaacgtctattctggaatgggaattctg
aggccgtttcggctgctgagggtctttaaactagcaaagtcctggccgactctcaacatg
ctgatcaagatcatcggcaactcgattggcgccatgagcaatctgacactggtgctggcc
atcatcgtcttcatcttcgccgttgtgggcatgcagctgttcgggaagagctatggcgac
tgcgtgtgtaagatttccgatgactgcacccttccacgctggcacatgaatgattttttc
cactcgttcctgatcgtcttcagggtgctgtgcggcgagtggatcgagaccatgtgggat
tgtatgcaggtggcaggacaacccatgtgcttaattgtgttcatgatggtcatggtgatc
ggaaatctggtggttttgaatctgttcctagctcttctgctcagctccttcagcgctgac
aaccttacggtcacaggcgaggaagctgaaaaaaacaacctgcagatagccgtcggtcga
atcaagaatgcgtttgctttcgttaaagtgcgtctgcacagtttcttctcgagcggctgt
gtgaaaaggaggaagaagaaaaggaaatcggtgcatgcaaacgacagcaaggaagtgaac
gataatgccaaccataccgcgttagaactgttgcaaaaaacgaccgaaacagacactgca
agtgaaactgagcatattatcagcaacccgagcttgaccatcagtgtcccgatagcagaa
gaggagtctgattttgagtgcctaaacactgaggacttcagcagtctcacctcggacctg
gaggaagacaaagaggagctaactgatataagctcctccgagggtagcacagtggacctc
agacaccatggacatgtaaaacaagacggagaagtttctgtagactttgacaaggaggaa
tctacagacccagatgcttgttttacagccgggtgtgtccggagatgcccgtgctgccag
gtgaatgttgacaagggcttctggaagacctggtggatgctgagacaggcttgctacaac
atagtagagcatagctggtttgagacattcatcgtctttatgatcctgctcagcagtggc
gctctggcgtttgaggacatttatctcgactcaagaaaaacagtaaagatcatactggaa
tatgcggataaggttttcacctacatctttattcttgagatgctcttgaagtggattgcg
tatggatttgccaaatacttcaccaacgcctggtgctggttggactttattattgttgat
gtttctctggtcagtctggtggccaacgccctggagtactcagagttgagtgccatcaaa
tctctccgaacactgagagccttcagacctctccgagctctctcacgctttgagggaatg
agggtggttgtgaacgctcttctgggtgccatcccctccattataaatgtcctgctggtg
tgtctcatattctggctgatttttagcatcgtgggtgtcaacttcttcgccggaaagttt
tatgaatgtgtaaacattaccacaaacgaacggctgcctatttcaatggtcaacaatgga
acagattgtaagcagatgaacaatgaaacccgctggaaaaatctgaagattaactttgac
aacgtaggaaacggatatctggccctgctgcaggtggccacgtttaaaggctggatgccc
attatgtatgctgctgtagactcccgtaatcaacaagaacagccgaaatacgaagtgaat
ctgtatatgtatgtgtattttgtaatcttcatcatccttggagctttcttcacattaaac
ctcttcattggtgtcattattgacaacttcaaccagcagaagaaaaagtttggaggtcag
gatattttcatgacagaagagcaaaagaaatattacaatgctatgaagaagcttggctcc
aagaaacctcaaaaacccataccaagaccagctaacaagattcagggatgtatctttgac
cttgtgaccaatcaggcctttgacattttcatcatgatacttatatgcctcaacatggtc
gccatgatggtggaaacagataatcagtcaaacgagatggaaagcgtactgtactggatc
aatcttggcttcatagtgctgtttaccggcgaatgtgtgctgaagatgttctctctacga
cattatttcttcaccgttggctggaatgtattcgacttcatcgtggtcattctgtctata
gttggaatgtgcctctcaaatgtcattgagaaatactttgtctcgccgaccttgtttcgc
gtaattcgcctcgcccggatcggtcgcgtattacgtctcatcaaaggtgccaagggaata
cggacccttttgtttgctttgatgatgtcacttccagcccttttcaacatcggacttctg
ctcttcctcgtcatgttcatctacgccatcttcggcatgtcaagcttcgcctacgtcaag
aaaacagatggcatcgatgaaatgttcaacttcgagacgttcggcaacagcatgctgtgt
ttgtttcagataacgacgtcggcgggctgggacggtcttctggcgccgatgctcaacacc
aaacccgactgcgacccgaataaaacctttaccggcagcaacgttaagggcgactgcgga
aaccctgccgtcggcattttcttcttcgtcagctacgtcattatatgtttcctggttgtg
gtgaacatgtacatcgctgtaatcttggagaactttagcgtggccacagaggagagcgcc
gaacctttaagcgaagacgactttgaccgattttacgaggtttgggaaaaattcgatcct
aaagctacgcagttcgtggagtaccgaaatttgtccgaattcgccgacacactcgatcct
cctctgcgtattcccaaacccaacagactgcaactgatatccatggatttaccaatggtg
agtggagaacgaatccactgtctggatattttattcgctttcaccaaacgtgtactcggc
gaagggggtgaaatggacgtccttcgtgggcaaatggaagaacgcttcatggcctccaac
ccctccaaggtttcttacgagcccatcacaacgaccctacgcagaaaacatgaggatatg
tcagccgccgtgatccagagagccttcaggacgcacaaaatcaggcatcacatgaagaag
ggcagtaatgcgctcagagagatcaaacaccaaaatggaaaggtcccgagaaaagagtct
gtagtcaacgaaaattttaacgatgttgcgatttcggaaaattccgacttgacaccttcc
acgtcctctccgccgtcgtatgacagcgcggcaccggacggcaaaaacaaatacgagacg
gataagcgtgagagagaagtaaaaggtaaggacaacgcagggaagaacgactga
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