Misgurnus anguillicaudatus (oriental weatherfish): 129455197
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Entry
129455197 CDS
T09481
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129455197 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129455197 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129455197 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
manu00535
]
129455197 (col9a2)
Proteoglycans [BR:
manu00535
]
Extracellular matrix (ECM) proteoglycans
Others
129455197 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129455197
NCBI-ProteinID:
XP_073714359
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All DBs
Position
20:19832259..19856071
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AA seq
717 aa
AA seq
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MAGYFNILKSLVLLQALCLALAQVTGPPGQPGPIGPPGPAGIPGADGIDGEKGPPGPPGP
PGQKGESGEPGPDGAPGEDGIDGLIGAKGERGPRGNPGPKGKQGPSGPSGPPGPGLPGLP
GAPGPIGLPGQIGSTGPKGVLGNPGPPGLPGPHGKPGPPGKFLGPEEGSADFQCPTNCPP
GPKGPQGLHGVKGHKGRAGVLGDSGSIGNVGLKGNVGISGEQGIPGPPGPQGLRGYPGMV
GPKGEMGPRGYKGIAGPIGIPGRPGEEGPQGPPGNSGQKGDLGDRGIRGPQGVVGKKGEN
GLPGIDGKDGTPGIPGIKGAAGQNGRPGAPGNQGDPGLPGMPGAKGEIGVKGDQGPRGLM
GMQGPPGPQVCHITIKMYFFGSSASHVCLSSSVPQGEPGLPGEAGMEGVPGPKGDRGERG
PVGLTGITGLPGSKGERGPMGIPGPQGLPGTKGDKGFQGKVGEKGDIGDPGVEGLAGEKG
EKGQSGEPGPKGQEGVTGDPGYNGPAGDPGKPGDQGPPGLPGPRGNAGERGVPGMPGLQG
SAGRDTSDQHIIEVVLKMLQEKLSAVAVSAKRAVLGGAGVMGPPGPPGPPGPPGPQGPHG
LTGARGIPGIIGAAGQIGNIGLKGKRGAKGDRGDPGRPHPGQPGPPGLQGPPGLDGVARD
GKPGERGPQGVPGEPGRPGKVGHPGLPGFCEAAACLAASAYTSPRLQEAGTVKGPST
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctggatacttcaacatcctcaaaagcttggtcctgttgcaggcactgtgcttggcc
ctggctcaagtgactggcccaccaggacaaccgggccccattggtccccctggccccgca
ggaattcctggtgccgacggtattgatggtgagaagggccctcccggaccccctggccca
cctggtcaaaagggggaatcgggtgagcctggtcctgatggagctccaggggaggacggt
attgatggtttgattggggctaaaggtgagaggggtccacgtggtaatcctggaccaaag
ggtaaacaagggcctagtggaccatcaggaccacctggacctggactgcctggacttcct
ggagcaccgggtcccattggtcttcctggacaaattgggtctactggaccaaaaggcgtt
ttgggaaatcctggacctccaggattacccggccctcatggcaaacctggtccaccagga
aagtttctgggcccggaggaaggcagtgctgacttccagtgtccaaccaactgtccacct
gggccgaagggtccacaggggctacatggagtgaagggccataagggtcgtgctggggtt
ttgggagattcaggaagcattggaaatgtgggtctgaagggtaatgtcggaatctctggc
gaacaaggaataccaggccctccaggtcctcagggtttgagaggatatcctggaatggtg
ggacccaaaggtgagatgggaccacgtggttataaaggcattgctggaccaattggcatc
cctggacgccctggtgaggagggtcctcaaggaccacctggaaactctggacagaaaggt
gacttgggagatcgtggcatacgtggtcctcagggagttgttggaaagaaaggagaaaat
ggtcttccaggtattgatggaaaagacggcacacctggcatccccggaataaagggggct
gcaggacaaaatggcagacctggagctcctggtaaccagggagatccgggtttacctggt
atgcctggagccaagggtgaaataggggttaagggtgaccaaggacccaggggcctgatg
ggaatgcaaggacctcccggacctcaagtatgtcacatcacaatcaaaatgtattttttt
ggctcttcagcatctcatgtttgtctctcctcttctgttcctcaaggagagcctgggctt
ccaggtgaagctgggatggagggagtcccagggccaaagggtgacaggggtgaacgagga
ccagttgggcttactggaattactggtttaccgggaagtaaaggagagagagggccaatg
ggcatcccagggcctcaaggtctacctggaactaagggtgacaagggattccaaggcaaa
gtgggagagaagggagacatcggcgatcctggtgtagagggtctggctggagaaaaggga
gagaagggacaatctggtgagcctggtcctaaaggtcaggaaggtgtgactggtgatcca
gggtacaacggccccgctggagatcctggcaaaccaggagatcagggtcccccaggccta
cctggtccacgcggcaatgcaggagaaagaggtgttccaggcatgccaggactacaggga
tcagctggtcgcgacacatccgatcagcacatcatcgaagttgtcctgaagatgcttcaa
gagaagttatctgcagtggcagtgagcgctaagagggcagtgctgggaggagcaggtgtg
atgggacccccaggtcctcctggaccaccaggacccccgggacctcaggggcctcatgga
ctaactggtgcccgtggaatccccggcataatcggggccgcaggacagatcggcaacatt
ggccttaaagggaagaggggtgccaagggagacagaggagatcccggtcgaccacaccct
ggccaaccgggtccacctggactgcaaggtcctccaggtctggatggtgtggcgcgagat
ggtaagccaggtgagagaggaccacagggtgtaccgggtgaaccgggccgtcccggaaag
gtcggtcatcctggtctccctggattctgtgaagcagctgcatgtttggcggcctctgcc
tatacttctcctagactacaggaggcaggaacagtcaagggcccgtccacttaa
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