Mariniflexile rhizosphaerae: CJ739_3763
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Entry
CJ739_3763 CDS
T05592
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
marf
Mariniflexile rhizosphaerae
Pathway
marf00260
Glycine, serine and threonine metabolism
marf00460
Cyanoamino acid metabolism
marf00630
Glyoxylate and dicarboxylate metabolism
marf00670
One carbon pool by folate
marf00680
Methane metabolism
marf01100
Metabolic pathways
marf01110
Biosynthesis of secondary metabolites
marf01120
Microbial metabolism in diverse environments
marf01200
Carbon metabolism
marf01230
Biosynthesis of amino acids
marf01240
Biosynthesis of cofactors
marf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
marf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CJ739_3763
09102 Energy metabolism
00680 Methane metabolism
CJ739_3763
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CJ739_3763
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CJ739_3763
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CJ739_3763
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CJ739_3763
Enzymes [BR:
marf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CJ739_3763
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
AXP82823
LinkDB
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Position
complement(4527945..4529216)
Genome browser
AA seq
423 aa
AA seq
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MQRDEQIFELIEAEKERQLHGIELIASENFVSNQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDEVEQIAIDRAKALFNAAYVNVQPHSGSQANTAVYHACLTPGDKILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVEQETGVLNYDKIQEIATKEQPKLIIAGASAYSRDIDFKRFR
VIADSVGAILMADISHPAGLIAKGILNDPMPHCHIVTTTTHKTLRGPRGGMIMMGQDFDN
PFGITLKDGSLRKMSSLLDSAVFPGNQGGPLEHIIAAKAIAFGEALTDDFLHYQLQVKAN
AATMANALVEKGYNIISGGTDNHCMLIDLRNKNVSGKEAEQALVKADITVNKNMVPFDTR
SPFVTSGIRVGTAAVTTRGLKEADMLEIVELIDEVIANHENEAVLEAVKVKANAMMAGRP
LFV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaatttttgaactaattgaagctgaaaaagaacgccaactacat
ggtatagaacttattgcatcagagaattttgttagcaaccaagttatggaagcagcaggc
tctgtattgaccaataaatatgctgaaggctatccaggaaaacgctattatggcggttgt
gaggtggttgatgaagtagaacaaatagctattgatagagcaaaagctttgtttaatgcg
gcatacgttaatgtacaaccgcactctggaagtcaagcaaacactgcggtttaccatgcg
tgtttaacgccgggagacaaaattttaggtttcgatttgtcacatggtggtcatttaaca
cacggttctccagtgaacttttccggtaaattgtataaccctgtattttatggtgtagag
caggagacaggggttttaaactatgataaaattcaggaaatagccactaaagagcaacca
aaattaatcatcgctggtgcatctgcatactctcgtgacatcgattttaaacgttttaga
gtcattgccgatagcgttggtgctattttgatggccgatatttcgcatcctgcaggattg
attgccaaaggtattttaaacgatccgatgccacattgccatattgtaacgactacgacc
cataagactttaagaggcccaagaggtgggatgattatgatgggacaagattttgataac
ccatttggtatcactttaaaagatggtagtttacgcaaaatgtcgtcgttattggattct
gcggtattcccaggaaatcaaggaggcccattagagcatattattgctgctaaagccatt
gcttttggtgaagctttaaccgatgattttttacattaccaattacaagtaaaagcgaat
gctgctactatggcaaatgcattggttgaaaaaggatacaacattatttcgggaggtacg
gataaccactgtatgcttatagacttacgtaacaaaaacgtatcaggtaaagaagcagaa
caagctttggtaaaagcagatattaccgtaaataaaaacatggtaccttttgatacccgt
tcaccatttgtaacatcgggcattcgtgttggtaccgcagcggttaccaccaggggttta
aaagaagccgatatgctggaaatagtagaacttattgatgaagttattgccaatcacgaa
aacgaagccgttttagaagctgtaaaagtgaaagcaaatgcaatgatggctggcagacct
ttgtttgtgtaa
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