Marinobacterium aestuarii: A8C75_14255
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Entry
A8C75_14255 CDS
T04398
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mars
Marinobacterium aestuarii
Pathway
mars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8C75_14255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mars03019
]
A8C75_14255
03009 Ribosome biogenesis [BR:
mars03009
]
A8C75_14255
Enzymes [BR:
mars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A8C75_14255
Messenger RNA biogenesis [BR:
mars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8C75_14255
Ribosome biogenesis [BR:
mars03009
]
Prokaryotic type
rRNA helicases
A8C75_14255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
AAA_19
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANG63518
UniProt:
A0A1A9F0Y3
LinkDB
All DBs
Position
3264828..3266633
Genome browser
AA seq
601 aa
AA seq
DB search
MSDAGEQLSFTSLGLSEPVLKALTDVGYETPSPIQAASIPFLLAGRDLLGMAQTGTGKTA
AFALPLLSRLDTTRREPQMLVLAPTRELAIQVAEACQTYAKHIPDFHVLPIYGGQAYDTQ
LRQLKRGAQVIVGTPGRVMDHLRRGSLKLDTLSAMVLDEADEMLRMGFIDDVEWILEHTP
KTRQIALFSATMPPQIKRVAQKYLNNPEEVRIVSKTSTAPTITQKYLRVSSHHKMEALTR
ILEIESFEAMLIFVRTKSATEELASKLSARGHAAEALNGDISQQQRERIVERLKGGKIDI
LVGTDVVARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRETRMLY
AIEKATRQPLERIELPSVGVINEKRVERFMQRISDTLDNGEMSTYLDLLTDYQKEHDTDP
LQIAAALALMAQGETPLLLDEREIPQPREYKDEQPRERRGPINVNPTARPLKDHPEIEMQ
RFVVMVGRSHGVMPKNIVGAIANEANMAANLIGQIDLFDDYSTVDLPAGMPAKVMQVLKK
AFVCGQRLNIHAAGETPDAADRGAPSRGARRPGGPNKGAPNRSRSSKPREGAAPNRRPPQ
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgctggtgaacagctctcctttacctctctcggtctgtccgaaccggtgctc
aaagcactgaccgatgtcggttacgaaactccatctccgattcaggcggctagtattccg
ttcttgctcgccggcagagatctgctgggcatggcacagactggcactggtaaaaccgct
gccttcgcactgccgcttctgtcccgtttggacactacacgtcgcgaaccccaaatgctg
gtgctggcgcctacgcgcgagctcgcaatccaggttgctgaagcttgccagacgtacgcc
aagcacatcccggatttccatgtcctgccgatctacggcggccaggcctatgatacccag
ctgcgccagctcaagcgtggcgctcaggtgatcgttggcacaccgggccgtgttatggac
catttgcgtcgcggctcactcaaactcgacacactcagcgccatggtgctggatgaggcc
gacgaaatgctgcgcatgggtttcatcgacgatgtcgaatggatccttgagcacacgccc
aagacccgccagattgctctgttctcggctaccatgccgccgcagatcaagcgcgttgca
cagaaatacctgaacaatcctgaagaagtccggattgtcagcaagacgtcgaccgcaccg
accatcacgcagaaatacctgcgcgtcagcagccatcacaagatggaagccctgacccgc
atcctcgaaatcgaatctttcgaggccatgctgatctttgtgcgcaccaagtcggccacc
gaagagctggccagcaaactgtccgcccgcggccatgctgctgaagcccttaatggcgat
atttcacagcagcagcgcgagcgcattgtcgaacgcctcaaaggcggcaagatcgatatc
ctcgtgggtaccgacgttgttgcccgcggcttggacgttgaacgtatcagccacgtgctg
aactacgacatcccctacgataccgaatcctatgtgcaccgtatcggccgcaccggccgt
gccggacgcaagggcgaagcgatcctgttcgtggcaccgcgtgaaactcgcatgctctac
gccatcgaaaaggccacccgccagccgctggaacgtatcgaactgccgagcgttggcgtg
atcaacgaaaaacgtgttgagcgtttcatgcagcgcatcagtgacaccctggataacggt
gaaatgtccacttatctggacctgctgaccgactaccagaaagagcacgacaccgatccg
ctgcagatcgccgctgccctcgccctgatggcccagggtgaaacacccctgctgctggac
gagcgtgaaatcccgcagccacgtgaatacaaggacgagcagccgcgcgagcgccgtgga
ccgatcaatgttaatccgacagcccgcccgctgaaggatcatcccgagatcgaaatgcag
cgctttgtggtcatggttggccgcagccacggcgttatgccgaaaaacatcgttggcgcc
atcgccaacgaagccaacatggctgccaacctgatcggccagatcgatctgttcgacgac
tacagcaccgttgaccttccggccggcatgcccgccaaggttatgcaggttctgaagaaa
gccttcgtgtgtggacagcgcctgaacattcatgcggccggcgaaacgccagacgctgct
gatcgtggcgctccctcacgcggcgcacgtcgcccaggcggccctaacaagggtgctccc
aaccgcagccgtagcagcaagcctcgcgaaggcgctgctccgaaccgccgtccgccgcag
aagtaa
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