Myxocyprinus asiaticus (Chinese sucker): 127420930
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Entry
127420930 CDS
T08782
Name
(RefSeq) collagen alpha-2(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127420930
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127420930
09142 Cell motility
04820 Cytoskeleton in muscle cells
127420930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
masi00535
]
127420930
Proteoglycans [BR:
masi00535
]
Extracellular matrix (ECM) proteoglycans
Others
127420930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
127420930
NCBI-ProteinID:
XP_051519531
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Position
30:complement(22317708..22346152)
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AA seq
691 aa
AA seq
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MAKYFSILKSWVLLETLCLAVAQVTGPPGPQGPAGPPGPAGIPGADGVDGEKGPPGPPGP
AGQKGEPGEPGPNGLPGEDGIDGLIGAKGERGPRGNPGPKGKPGPTGPPGQPGPGLPGLP
GAPGAIGLPGQIGPTGPKGVMGSAGPPGLPGPPGKPGQPGKFLGAEEGSADFQCPTNCPP
GPKGPQGLQGVKGHKGRAGVLGDTGSIGKLGSKGDVGISGEQGIPGPPGPQGLRGYPGMV
GPKGETGPRGYKGIAGPIGIPGRPGEEGPQGPPGEPGDKGDMGERGIRGPQGVVGKKGEN
GLPGIDGKDGTPGIPGIKGAPGQNGRPGAPGHQGDPGLPGIPGAKGELGVKGEPGPRGLM
GMQGAPGPQGEPGPPGEAGMEGVPGPKGDRGERGPVGLPGIVGLPGSKGERGPMGVPGAQ
GLTGTKGDRGFQGKVGAKGDVGDPGVEGLAGEKGEKGQSGEPGPKGQQGVTGDQGSNGPT
GDPGKPGDQGPAGLPGPRGLTGERGVPGMPGIQGPAGRDTSDQHIVDVVLKMLQEKLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGAPGPQGPHGLTGARGIPGMIGGPGQIGNTGLKGKR
GAKGERGDPGRPHPGPPGPPGLQGPPGLDGVARDGRPGERGPQGAAGEAGRPGKAGPPGL
PGYCEAAACLAASAYTSPRLQEAGTVKGPSN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatacttctctatccttaaaagctgggtcctgttggagacgctgtgcttggcc
gtagctcaagtgacaggtccacctggacctcaaggccctgctgggccccctggccccgct
ggaattcccggtgcagatggcgttgatggtgaaaagggtcctcctggcccacctggccca
gcaggtcaaaaaggagagcctggtgagcctggccctaatggacttccaggggaggatggt
attgatggtttgattggggctaagggtgaaaggggccctcgtggtaatcctggaccaaag
ggtaagccaggacctactgggcctccaggacaacctggaccaggactgcctggacttcca
ggagcaccaggtgctattgggcttcctggacaaattgggcctactgggccaaagggcgtt
atgggaagtgctggacctccaggattaccgggaccgccaggcaagcctggtcaaccagga
aagtttttgggtgcagaggaaggcagtgctgacttccagtgtccaaccaactgtccacct
gggccaaagggtcctcaaggactacagggagtgaagggacataagggacgtgctggtgta
ttgggagatacaggaagcattggaaaactgggttcaaagggtgatgtcggaatctctggg
gaacaaggaataccaggccctccaggaccacagggtttgagagggtatccgggaatggtg
gggcccaaaggcgagacaggaccccgtggttataaaggcattgctggaccaattggtatc
cccggacgccctggagaagaaggaccccaaggaccacctggagagcctggtgataaaggt
gacatgggagaacgtggtataagagggcctcagggagtggttggaaagaagggagagaat
ggtcttccaggaattgatggaaaagatggcacacctggcatcccaggaattaagggtgct
ccaggacagaatggaagaccaggtgctcctggtcaccagggagatccaggtttgcctgga
atcccaggagccaagggtgaattgggagttaagggtgagccagggcccagaggcttgatg
ggaatgcaaggtgctccaggacctcagggagagccaggtcctccaggtgaagctggcatg
gagggagttcctgggccaaagggtgacaggggagagagaggaccagttgggcttcctggt
attgttggcttgcctggaagtaagggagaaagagggcctatgggtgtgccaggggctcag
ggtctaacaggaacaaagggtgacaggggatttcaaggcaaagtgggagcaaagggagac
gttggtgatcctggtgtagagggattggctggagagaaaggagagaagggacagtctggt
gagcctggccctaagggacagcaaggtgtgactggtgatcaagggagcaatggccctact
ggagatcctggtaaaccaggagaccagggacccgcaggcctacctggtccacgtggcctt
actggagaaagaggtgttccaggaatgcctggaatacagggaccggctggccgtgatact
tcagatcagcacatcgttgatgtggtcctgaagatgcttcaagagaagttagctgctgtt
gcggttagtgctaagagagcggtgctgggtggagcaggtgtcatgggacctccaggtcct
ccaggaccaccaggggctccaggacctcagggtcctcatggactaaccggcgcccgtggc
attcctggcatgatcgggggcccaggccagataggcaacactggccttaaagggaagagg
ggtgcaaagggagagagaggagatcctggtcgaccacacccaggcccaccaggaccacct
ggactgcaaggtcctccaggtcttgacggtgttgcccgcgacggtaggccaggcgagaga
ggaccacagggtgcagcgggtgaggctggacgccctggcaaagcaggtcctcctggtcta
cctgggtattgtgaagcagctgcatgtttggcagcctctgcctacacttctcctagacta
caagaggccggcacagtgaagggcccatccaattaa
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