Myxocyprinus asiaticus (Chinese sucker): 127426385
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Entry
127426385 CDS
T08782
Name
(RefSeq) collagen, type IX, alpha 1a
KO
K08131
collagen type IX alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127426385
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127426385
09142 Cell motility
04820 Cytoskeleton in muscle cells
127426385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
masi00535
]
127426385
Proteoglycans [BR:
masi00535
]
Extracellular matrix (ECM) proteoglycans
Others
127426385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
127426385
NCBI-ProteinID:
XP_051529133
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All DBs
Position
35:complement(17569416..17592546)
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AA seq
687 aa
AA seq
DB search
MARAGTLRASLLVILLQIVLISSAQRGPPGPRGPPGPPGVPGFSGVDGIDGERGPGPGPD
GPPGPDGENGRNGLNGLPGNPGADGLTGPRGEPGPAGPTGQKGEPGEPGPRGAPGVGEDG
EAGADGEDGLPGELGKVGPPGSRGLRGPVGAQGLPGPRGPPGVWDGKELCPNACTSGLTG
YTGLPGMKGHKGGKGESGEPGRQGHKGEEGDQGAPGEPGAQGTPGPQGLRGITGIMGPKG
DRGLRGNVGDLGPQGIQGAPGDHGQRGKVGEAGPKGAQGALGFQGLMGLPGLKGETGLPG
VDGRDGIPGLPGVKGLPGKVGSPGEAGLQGFPGLPGIPGAKGHMGEKGNSGDPGMAGLIG
NNGKTGERGDQGEVGQVGPRGGPGERGERGPDGPAGLPGVRGAKGDLGLPGLSGPAGLPG
QKGDRGLVGLTGPKGEQGPPGEEGTPGEKGDVGDEGEPGEKGSTGKPGDTGNKGPEGGRG
QPGPEGPPGEPGPRGMQGDRGVPGLPGIQGRRGQAPTNEHIKQVCMRVMQGQLAQLAASL
TRPESGIAGLPGPPGPPGPPGPAGDNGFPGHPGGRGLPGLKGPPGLLGRKGPKGDQGDRG
DRGPTVQGPKGIPGPPGLPGDPGRPAYGSDGRDGLRGQPGVPGMPGVPGPPGPAGLNGYC
EPSQCIFQAVAAPQSAKESSMKGPDGL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgccgggactcttcgcgcgtctctgctggtcattttactgcagatagttctg
atcagctctgcacagagggggccacctggtccaagagggccacctggacctccaggggtt
cctggattttctggcgttgacggcattgatggtgagaggggacctggccctggccctgat
ggccccccaggccctgatggagaaaatggcaggaatggattaaatggccttccaggaaac
ccaggagcggacggtttgactgggccacgtggtgaaccgggccctgctggccctactgga
cagaaaggtgaacctggtgagccaggtccaaggggagctcctggtgtcggagaggatggt
gaagctggtgctgatggggaagatggattacctggagagctgggcaaagttggacctccg
ggaagtcggggattaagaggtcccgttggtgctcaaggactgccagggccaagaggccct
cctggagtctgggatggtaaggagctgtgtccaaatgcctgtacttctggtttgactggt
tacactggtcttccaggcatgaagggtcacaaaggtggcaaaggtgaatcaggtgaacca
ggaaggcaaggacataagggtgaagaaggagaccagggagcacctggagagccaggagca
caaggaacacctggtccacagggtctcagaggaatcacagggataatgggccctaaaggg
gacaggggacttcgtgggaatgttggcgatttgggtcctcagggcatacagggtgctcct
ggtgatcatggtcaaagaggaaaagtaggtgaggccggaccaaaaggagctcagggagca
ctgggctttcagggacttatgggtttacctggactgaaaggagagactggtttgcctggg
gtggatggtcgtgatggtattccaggacttcctggagtgaagggtcttcccgggaaagtt
ggctcacctggagaggctggacttcagggattcccaggtttaccaggtattccaggagca
aagggccacatgggtgaaaaaggaaattctggtgatcctggcatggcaggtctgattgga
aataatggaaaaacaggtgaacgtggtgaccagggagaggttggacaagtcggaccaaga
ggtgggccaggagagagaggagaaagaggccctgatgggcctgcaggcttgccaggtgta
aggggtgctaaaggagatttgggccttcctggtctttcagggcctgctggcctacccggg
cagaaaggagacaggggcctggttggtctcactggtccaaaaggcgaacaaggaccacct
ggtgaagaaggaacaccaggagagaaaggagatgtaggtgatgagggagagccaggagag
aaaggatcgacaggaaaaccaggagacacaggaaataaaggaccggagggagggcgtggc
caacctggacccgagggcccacccggagagcctggaccaagaggcatgcaaggagacaga
ggagtacccggactgcctgggatacagggacgacgaggccaagcaccaacaaatgagcat
attaagcaagtctgcatgagggtcatgcaaggacagcttgcccagctggcagctagtctg
acaaggcctgagtcaggtatcgctgggctgccaggtcctcctggtccccctggtcctcca
ggacctgctggagacaatggcttccctggacatcctggtggcagaggactgccaggtctc
aaagggccacctgggcttctaggaagaaaagggcccaaaggtgaccaaggtgacagggga
gatagagggcccactgtgcaggggcctaaaggtattcctggaccaccagggctcccaggt
gatccaggtaggccagcatatggcagtgatggccgtgacggcctgagaggacaaccaggt
gttcctggaatgccaggtgtgcctgggccacctggtcctgccggccttaacggatactgc
gagccatctcagtgcatctttcaagcagttgcagctccacagtctgccaaggagtcaagc
atgaagggaccagatggtctatga
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