Myxocyprinus asiaticus (Chinese sucker): 127432174
Help
Entry
127432174 CDS
T08782
Name
(RefSeq) tetratricopeptide repeat protein 37-like isoform X1
KO
K12600
superkiller protein 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127432174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127432174
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
127432174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_11
TPR_8
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
TPR_7
ANAPC3
HAT_PRP39_N
TPR_MalT
TPR_21
TPR_30
COG4_N
Motif
Other DBs
NCBI-GeneID:
127432174
NCBI-ProteinID:
XP_051538993
LinkDB
All DBs
Position
4:22641425..22673023
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKAELKSAREAIKNKEFKEALKHCKNILKLDKNNYNALVFIGVAATELQQPDQAQ
TAYRKATELEPEQLLAWQGLANLYEKSDQVDFKAELPKVYQKLISLYETSDKAKCFEVSK
KLAEVYQSEKSYLQVARVWRRLIQVREGEEGVQNSELLELWRGMTSLLQASVEDQDNETQ
QHLISAFERALQLTGDVPSEDHKSISEDYIKCLAKLPHEVAKLKEVCDAMLSLYPKCSYP
LEALSEHYIKTGDCSEEAIHCFSRLSELDPNNSLTHFGLGIKAFQEKKYEDAIKNISLGL
KRMRSSIIGWYNMAQAELKMHRYSDSATSSSQGLNSSMGNSEAWTQKLQRLRLEALVRTG
TEKDADEALKLLAQISDAQNDPVLLALKGRAHLQKGQTEEAFEVSAELLCSHPGSVEGLT
LKGLAYCAKDEHKQAEESYLEALSQSPENGELYFLLGRLYWNMGEETRRDRSKAHTHLLK
AAKLDPYLGSVFRFLGHYYREVAKDPSRARGCYKRAFELDSSDTEAGAATVDLSMEQGDM
DSALAVLQSVTDRATPGSAKWAWMRRGLYHLKVGQHQQAIADLQAALRADPQDWVCWECL
GEAYLNRRSFTAALKAFAKAHLLQPTSIYSLYQTAAIKQVLGRFKESAVEYRQILEQEDY
VPAMKGLGECFLALAKSALEDYLDGRAVDLIQNAIHYLFRAVQQRPDLSCLWKLLGDACT
TSRTVSPNRAKVLVPGALCGMEPPDQSQTLDQRQLLTLGERCFGRALKLMPEAPGLWCDL
GLNIYHQSRLLKSQYPEEDSQPLLEKAMQCVKKAVMLDSASHTYWNTLGVVAMAKGIENF
ALAQHSFIKSVKAESNNVIAWTNLGALYLKKGNIELSHEAFKIAQSLEPLYVNCWIGQAL
IAETVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCSTLLDKSNRDSELYLYNIVQMNAVS
AAQVALSKYTERIQTDPDAFIMLGYLNTHLQLKKQATEAYRRAADLLQASPHTEKLSFAL
RGYGRALSDDGQWEEAVRIYTSTPLEELHDLTGLALTCYRTGRLQESIQAYEKALAVASS
EKEKAYILTALALLQHRLGSMDLAKALLFKCSLLKEPVPESLQCLCALGLVHGDVTLASA
TLTELLKLGEPVEGAVEERCLLTCTVLALQGKFSSVHREAARAIHRNPGNPSLWALLSRL
VPQYCPNKAGGGAVAGSVACHASLTLGKRALLYSGVNQLASGRHSGEDRRQNALKTIQRA
VLLCPDDPAGWAGLMAACHTENTVCLLSGSAPRRENLERELMTLVSEKVKGLQGEDGLLA
QALEGWVLQQAVTGLKQSGQYDQAETLCSQVLSVSPEHPVVFLMLRQVQCERLLLCEAGN
CVPPAVLDQLSAAVMANLTSVSAWHWLAEVYRSQGLLSQASVAYRQSLQLASQLGDNSGK
MSSLLRLALLALTTCMAGVCVSEWKDLVLEASTEVLKMGVSPVALLFQALLQFSIKMGAR
ETRRLLERIVYMSASGRSESVVSVARWYLLRHLHSKDDLELIDSLLVEATAAGDSRLVDF
HRRLYPFS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtaaaagcagagcttaaaagtgccagagaagccatcaaaaataaa
gagtttaaagaagctttgaaacattgtaagaatattctcaagcttgataagaataactat
aatgccttggtgttcattggagtggcagccacagagctgcagcagcctgatcaggcacag
acagcctacagaaaagccacagaactggagccagagcaactgctggcatggcagggtcta
gcaaatctgtacgagaaaagtgaccaagtggatttcaaagccgagctgccaaaggtctac
caaaaacttatttcactctatgaaacatcagacaaagcaaagtgttttgaagtgagcaag
aagttggcagaagtctatcagtcagagaagagctatttacaggtggccagagtatggcgg
aggttgatccaggtgagggagggggaggaaggggtgcagaattcagagctgctggagctg
tggagagggatgaccagtctgctgcaggccagtgtggaggatcaggacaatgagactcag
cagcaccttatatcagcatttgaaagagctttgcaactgactggagatgtacccagtgaa
gaccacaagagcatctcagaggattacattaaatgtcttgctaagcttcctcatgaggtg
gccaagctaaaggaggtgtgtgatgccatgctgtccctctatccaaagtgttcctaccct
ctagaagccctcagtgagcactacatcaaaactggtgactgcagtgaggaagccattcac
tgctttagtcgcctctcagaactggatccaaacaactcactcactcactttggcctcggt
attaaagcttttcaggaaaagaaatatgaggatgccatcaagaatattagtctgggactg
aagcgaatgcgatcctccatcatcggctggtataatatggctcaggctgaactgaaaatg
catagatactctgacagtgccacatcttccagccaagggctaaattcgagtatggggaac
tctgaggcttggactcagaagctgcagaggttgagactagaggctctggttaggactggg
acagaaaaggatgctgatgaagctctgaagttacttgctcagatttcagatgcccaaaat
gacccagtgcttttagctttaaagggaagagctcacctgcaaaaaggccaaactgaggaa
gcatttgaggtttctgctgagctgctttgctctcacccaggctctgtggagggtctcact
ctgaagggacttgcatattgtgctaaagatgaacacaagcaggcagaggagagctatctt
gaggctttgtcccagagcccagagaatggggagttgtacttcttgctggggcgcctgtat
tggaacatgggcgaagaaactcggagggaccggagcaaagcccacacacatttactgaag
gctgctaaactggacccgtatcttggttcagtgtttcgtttcctgggtcattactacagg
gaggtggcaaaagacccgagcagggccagaggctgctataagagagcatttgagctggat
tcctctgacacagaggctggagctgctactgtggacctcagcatggagcagggagacatg
gactcagctctggctgtgctgcagtcagtaacagacagagccactcctggctctgctaaa
tgggcctggatgaggagggggctctaccatctgaaggttggtcagcaccaacaggctatt
gcagatctgcaggcggcattgagggctgatcctcaggattgggtgtgctgggagtgtttg
ggtgaggcctatctgaaccgcaggagtttcacagctgctctgaaagccttcgctaaagca
catctcctgcagcccacctccatctacagcctctatcagaccgccgccatcaaacaggtc
ctggggcgctttaaagagtccgccgtcgagtacaggcagattttagagcaggaggactac
gtgccagcaatgaaaggtcttggtgaatgctttttagccttggctaaaagtgccctggag
gattatctagatggcagagcagtagacctgatacagaacgccatccattacctctttaga
gcggtccagcaaaggccagacttgtcctgtctgtggaagttgcttggcgatgcctgcacc
acctccagaactgtatcgccaaaccgggccaaagtgctggtacccggagccctgtgtgga
atggaaccacctgatcaaagccaaacactggaccagagacagctcctcactcttggagaa
aggtgctttggtcgtgctttgaaactgatgcctgaggcacccggtctgtggtgtgacctt
ggcctgaacatctaccaccaatccagactgctcaaatctcagtatcctgaagaggactct
cagcccctgctggagaaagctatgcagtgtgtaaagaaggctgtcatgctggatagtgcc
agtcacacatactggaacacccttggagtggttgccatggcaaagggtattgaaaacttt
gctcttgcacaacacagcttcatcaaatctgtcaaagctgagtcaaataatgtgattgca
tggaccaacctcggtgctttatatctgaagaagggaaatatagagctctctcatgaagct
ttcaagattgctcaatctttagagcccctctatgtgaactgctggatcggacaggccctc
attgccgagacagttggaagttacgacaccatggaccttttcagacataccacagaactg
agcactcatacggagggagtgaagggttatgcatattgggtttgctccacgcttctggat
aagagcaacagagactctgagctctacctctacaacatagtccagatgaatgctgtctct
gctgcccaggtggctctgagcaagtacacagagaggattcagacagaccctgatgccttc
atcatgctcggatacctgaacacacacctgcagctgaagaaacaagcaactgaggcatat
cgcagagctgcagacttgcttcaggcgtcccctcacactgagaagctcagctttgctctg
aggggctatggacgtgcccttagtgatgatgggcagtgggaagaggcagtccgtatttat
acctccacaccactagaagagctgcatgacctcacaggactggcgctcacgtgctatagg
acaggacgcctacaagagagcattcaggcttatgagaaagcccttgcagttgcctccagt
gagaaggaaaaggcctatatactcactgcactggctctgttacagcacaggctgggcagc
atggacctcgccaaagctctgctattcaagtgttcattgttgaaagagcctgttccagag
agtctgcagtgtctgtgtgctctgggtttggttcatggtgacgttaccctggcaagtgcc
acgctcacagaactgctaaagctgggggagcctgtagaaggtgctgtggaggagcgatgt
ctgctcacctgcactgtgctggctctacagggcaagtttagcagtgttcacagggaggct
gcgagagctatacacaggaacccgggaaatccatctctctgggctctactctccagactg
gttccacagtactgccccaacaaagctggtggaggcgctgtggcaggaagtgtggcatgt
cacgccagcttgacgcttggaaagagggcgttgctgtacagtggagtgaatcagttggcc
tcaggccgtcactctggtgaggacagaagacaaaatgctctgaaaactattcagagagcc
gtgctgctgtgtccagatgatccagctgggtgggcggggttaatggctgcctgtcacaca
gagaacactgtatgccttctctcaggctctgcccctcgcagggagaatctggagcgggaa
ctcatgaccctggtgtcggaaaaagtgaagggcctgcagggagaggatgggctcttggct
caggctctggagggttgggtgctgcagcaggcagtgactggactcaaacagagcggccaa
tatgaccaggcggagactctctgctctcaggttctgagtgtatctccagagcatcctgtg
gttttcctgatgttgaggcaggttcagtgtgagcgcctcctgctgtgtgaggcgggtaac
tgtgttcctcctgcagtgctggatcagcttagtgctgctgtcatggccaacctcacatct
gtgtccgcctggcattggctggccgaggtttaccgctctcagggcctgctgtctcaagcc
tctgtggcatatagacagagtcttcagctggcttctcaactgggtgacaacagtgggaag
atgagcagtcttctccggctagccctgcttgcgctgaccacatgtatggctggtgtgtgt
gtctctgagtggaaggatctggtgttggaggccagcactgaagttttaaagatgggcgtc
tctccagtagctttgctctttcaggcgttactgcagttctccatcaagatgggtgccagg
gaaacccgtcgtcttttggagaggattgtttatatgtcagcctctgggagatctgaaagt
gtggtatctgtggcacgctggtacctcctgcgtcacctgcactccaaagatgacctggag
ctgatagattccctgctggtggaggctacagcagcaggagatagcagactggtggatttc
cacaggcgactctacccattcagctga
DBGET
integrated database retrieval system
