Myxocyprinus asiaticus (Chinese sucker): 127435869
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Entry
127435869 CDS
T08782
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127435869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127435869
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127435869
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127435869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
127435869
NCBI-ProteinID:
XP_051545569
LinkDB
All DBs
Position
46:13662907..13700934
Genome browser
AA seq
2377 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVTHHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISSLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFVKQKLPDLLRSYVDSDLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPDKRDILMDRIL
PDSGELNKTMMESSLADFMQEVGYGFCASLDECRNIIMQYGVREVTASQVARVLGMMART
HSGLSDGIPLQSITNPVGGGIWSDGKDKSDASQAHTWNVEVLIDVVKDVNPNLNFKEVTY
ELDHPGFLIRDSKGLQIVVYGIQRGLGMEVFPVDLITRSWKHAEGQLSFIQHSLMNPEVF
CFADFPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLFSFPIKH
CPDMLMLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIM
HSMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDK
WLTDKIREHGEPFIQACVTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQSCA
GNVSQELSETILTMVANCSNVMNKARQPPPGVLPKGRAPSTSSLDAISPVQMDPLSAMGS
LSLGVSSTSHTPSMQGFPSLQGSAFSNPQSPAKAFSNLPTPNPSTAFPGINPLSSQLQGP
LSTSLTGIGSGLGMSAVSSDLFSTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKEIDDE
ANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYPD
KELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKD
YPQYCQHLASIAHFLQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSLALAQAQAQSQTP
KAPQPVQASTLVTTATTTTTAAKTTTITKPTAVGLKKDVPPSINTTNIDTLLVATDQTER
IVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHS
LYSNFLDTLKNPEFVKMVLSETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKN
KPILYTDLELKSLLLEAFVKGQQELLYVVPFVAKVLESSLRSVIFRPQNPWTMGIMNVLA
ELHQEHDLKLNLKFEIEVLCKNLSLDISELKPGNLLRDKEKLKNLEEQLSAPKKETKPPE
EMLPIVPTVDTTVPFSAAPPTSATTTTCTATGPPTPQFSYHDINVYALAGLAPHININVS
IPLLQAHPQLKQCVRPAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESHMRV
AAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMMEEAAARLAQDN
CELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPMVLTYQAERMPEQIRL
KVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWPTDDVAHIYDKCISD
LEQHLHAIPPALAMNPQTQAIRSLLEAMVMARTSRDGIAALGLLQKAVEGLLDATSGADP
DLLLSYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVN
MQQYDLHLAQSMENGLNYMAVAFAMQLVKLLLVDERSVSHITEADLFHTIETLMRTSAHS
RANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYLLRE
WVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQ
HPTTSPAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHD
VRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWL
ELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKGTLRVL
LVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEIN
IAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQLINALV
LYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNS
HTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWS
HDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgattcgctctcgctggctttgtctcaaatcagttacctggtggacaattta
actaagaaaaactacagagccagccagcaggaaatacaacatattgtgactcatcacggc
cctgaggcagaccggcatctattacgctgtctcttttcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccaccagacacaatttctgatccaggagtgtgtgtca
cttatttcaaaaccaaattttatttcatcactctgctacgccattgacaatcccctgcac
tatcagaagagtttaaagccatcacctcatttatttactcaactgagtaaagttctcaag
ctaagcaaggtccaggaggtgatttttggccttgctttgctgaactcaagcaacgcagac
cttcgagggtttgctgcccagtttgtcaagcagaagctcccagacctccttcgctcatac
gtggactcggacctcggagggaatcaggaaggtggcttccaagacattgccatagaggtt
ctgcatctgctcctctcgcatcttctgtttggtcagaagggctctagtggagtcggacaa
gagcagattgacgcgtttctcaaaacactgtgcagagatttcccgcaggagcgctgtcct
gtggtgctcgcaccactgctctaccctgacaaacgtgacattctcatggacaggatcctg
ccagactctggagagttaaataagaccatgatggagagttctcttgctgacttcatgcaa
gaagttggctatggcttttgtgcaagtcttgacgaatgcaggaatataatcatgcagtat
ggggtgcgagaggtgacagccagccaggtggctcgagtgctgggcatgatggcccgcact
cactctgggctgtccgatggcatccccctacagtcaatcacaaatccagtgggtggtggg
atctggagtgatgggaaggacaagagtgatgcctctcaggcccacacctggaatgtggaa
gttctgattgatgtggttaaagatgtgaaccccaatctgaatttcaaagaggtgacctat
gagctggaccaccctggctttctgatccgggacagtaaggggcttcagatagtggtgtat
gggatccagaggggtctggggatggaggtgttccctgtggatctcattaccagatcatgg
aagcatgcagagggacagctgtctttcattcagcactccctgatgaatcctgaagtgttc
tgctttgctgacttcccctgtcacactgtcgccattgacatcctgaaggccccacctgag
gatgacaacagagagatagccacatggaagagcctggacctagtggagagcctcttgcgc
ctctctgaagttgggcattatgaacaggtgaagcagctcttcagcttccccatcaagcac
tgcccggacatgctgatgttggccctgctgcagatcagcacctcctggcacaccctgcgc
catgaactcatctccacactcatgcccatctttctgggcaaccaccccaactctgccatc
atcttgcactatgcctggcatggacagggccaatccccctccattcgtcagctgatcatg
cactctatggccgagtggtatatgagaggagagcaatacgaccaagccaagctatctcgc
atcctggatgttgctcaggacttgaagtctctatcaatgctgctgaatggtactccattt
gcctttgtaattgaccttgctgcacttgcctcacgccgtgaatacctcaaacttgacaaa
tggctcactgacaaaatccgagagcacggggagccgttcatccaggcgtgtgtcacgttc
ctgaagagacgctgtccctccatcttgggtggtttggccccagagaaagaccagccgaag
agtgctcaacttcctcctgaaacactggctaccatgcttgcgtgtctacagtcttgtgct
gggaatgtatctcaagagctgtctgagacaatcttgaccatggttgccaactgtagcaat
gtgatgaacaaggctcggcagccaccaccaggagtcctgccaaagggacgggcgcccagc
accagcagcttagatgctatctcacccgtgcagatggaccccctctctgcaatgggatct
ttgagtctaggcgtctcatccacctcgcacaccccgagcatgcaaggattccccagcctg
caaggctctgccttcagtaacccccagtccccagctaaggccttttcaaacctgcccacc
ccgaatccgagcacagctttcccaggaatcaaccccctgtcttctcagctgcaaggtcct
ctgagcacaagcttgactgggattggctcaggtttgggcatgtcagctgtcagcagtgac
ctcttcagcaccaggaagatgagcacaccagggctgaacccgcccaccttccagcagact
gacctctctcaggtgtggcccgaggcaaaccagcactttagtaaggagattgacgatgag
gcgaacagctacttccagcgcatctacaaccatccgccacacccaaccatgtctgtggat
gaggtgctggaaatgctacagaggttcaaggactcgaacattaagcgggaacgggaggtt
tttaactgcatgctgaggaatctgtttgaggagtaccgattcttcccccaatatcccgac
aaagagctgcacatcaccgcctgcctgttcggaggaatcatcgagaagggcctagtcaca
tacatggcgctgggcttggccttacgatatgtcctggaagccttacgcaaacctttcgga
tcaaagatgtattactttgggatcgctgcactagatagatttaaaaatagattgaaggac
tatccccagtactgtcagcacttggcttctatagcccatttccttcagttccctcaccat
ttacaagagtatattgagtatggccagcagtcaagagaccctcctgtgaagatgcaaggc
tccatcaccaccccaggcagcctggctttggcccaagctcaggcccagtctcaaaccccc
aaagctccccagcctgtccaagccagcaccctggtgaccacagccaccacgaccaccacc
gctgccaaaactaccaccatcactaaacccacagctgttggactgaagaaggatgtgcca
ccttctatcaacaccacaaacattgacactcttttagtagccacagaccagactgaaagg
attgtagagcccccagagaatgttcaggagaagattgctttcatctttaacaacttgtcc
cagtcaaacatgacacagaaggtcgaggagctgaaagagactgtgaaggaggagttcatg
ccctgggtctctcagtacctggtcatgaagcgtgtcagcattgagcccaactttcatagc
ctgtattccaacttcctggacacactgaaaaacccagagtttgtcaagatggttctcagt
gagacttacagaaacatcaaggtcctccttacctctgataaggcagctgctaacttctct
gatcgatccctgctgaagaatttgggtcactggcttggaatgatcaccctagctaaaaac
aaacccatcctgtacacagacttggagcttaagtctcttctgctggaggcctttgtgaag
ggccagcaggagttgctgtatgttgttccctttgtggctaaagtcttggaatcaagtcta
cggagtgtgatcttcagaccacagaacccttggaccatgggcatcatgaatgttctggct
gaactccaccaggaacatgacttgaagctcaacctgaagtttgaaattgaagtgctctgt
aagaacctgtctctggacatcagtgagctgaagccaggaaacctgctgagagacaaagag
aagctgaagaacctggaggagcagctctctgcaccaaagaaagagaccaagcctcctgaa
gagatgctgcctatagtccctacagtagacacaacggtcccattttcagctgctccgccg
acttcagccaccaccactacctgtacagccaccgggccgcctacaccacagttcagctac
cacgacattaacgtctatgccctggctggtctggctccacacatcaatatcaatgtcagc
atccccctgctgcaggcccaccctcagctgaagcagtgtgtgagaccggcaatcgagcgt
gccgtacaggagctggtgcaccctgtggtagaccgttccatcaagattgctatgaccacc
tgcgagcagatcgtcagaaaggacttcgctctggactctgaagagtctcacatgcgcgtt
gccgcccatcacatgatgcggaacctgaccgctggcatggccatgatcacctgcagagag
ccgctgcttatgagcatcgccaccaacctgaagaacagctttgctgcagctcttagggct
cccacaccccagcagagagagatgatggaagaggcagctgctcgcctcgcacaggacaac
tgtgagctagcgtgttgcttcattcagaagacagcagtggaaaaagctggacctgagatg
gacaagagactggcaactgaattcgagctgaggaagcatgctcgccaggaaggccgtcgc
tactgtgaccccatggtgctcacctatcaggctgagcgcatgccagagcagatcagacta
aaggtgggtggagtggatcctaaacagctggctgtttatgaagagtttgcccgaaacgtt
ccaggcttcctacccagtaatgacctgtctcagcccactggattccttgctcagccaatg
aagcaacaggcatggcccactgatgacgtggctcacatctatgacaagtgcatttcagac
ctggagcagcacttgcatgccattccacctgccctggccatgaatccacagacccaggcc
atacgcagcctcctagaggccatggtcatggccaggacctcccgtgatggcattgctgcc
ctgggacttctgcagaaggctgtggaaggtctactggatgccaccagtggtgctgatcct
gatctgttgctaagctacagagagtgccatctgctggtgctgaaagccctacaggatggt
cgtgcctatggcccacagtggtgcaacaaacaaatcaccagatgcttgattgagtgtaga
gatgaatacaagtacaatgttgaggctgtggagctcctgatcagaaaccacctggtcaac
atgcagcagtatgatttacacctggctcagtctatggagaacgggcttaactacatggcc
gtggcattcgcgatgcagctggtgaaacttcttctggttgatgaacgcagtgtgagccac
atcactgaagctgatctcttccacactatcgagacactgatgaggaccagcgcccactcc
agagccaatgcacctgaaggtttgccccaactgatggatgtggtccgctccaactacgag
gccatgatcgatcgtcaccatggtgggccaaacttcatgatgcactctgggatttctcag
gcgtctgagtatgatgatccaccaggcctcagagaaaaggcagagtacctgctgagagaa
tgggtcaacctctaccactcagcagccgcaggcagggacagcaccaaggccttctctgca
tttgttggccagatgcaccagcagggcatcctgaagaccgatgacttgatcactcgcttc
tttcgactgtgtacagagatgtgtgtggagatcagttaccgcgctcaagccgaacagcag
cacccgaccaccagcccggccatcatcagggccaagtgctatcataacctggatgccttt
gttcggctcatcgccctactggtcaaacactccggagaggctaccaacacggtcaccaaa
atcaatttgctcaacaaggttctgggcatcgtagtgggtgtgttgatccaggatcatgat
gtaaggcagacagagttccagcagctgccataccaccgaatcttcatcatgctcttactg
gagctcaatgctccagagcacgtgctggagaccatcaacttccagaccctcactgccttc
tgcaacaccttccacatccttcggccgactaaagctcctggattcgtgtatgcttggctg
gagctcatctctcaccgcatcttcattgccaggatgcttgcacacaccccacaacagaag
ggttggcccatgtatgctcagctgctgattgacttgttcaagtatcttgcacccttccta
aggaatgttgaactcaacaaacctatgcaaattctatacaagggaacactccgtgtgttg
cttgtcctgctccatgacttcccagaattcctgtgcgactaccattacggcttctgtgat
gtcatcccacccaactgcatccagctgaggaacttgatcctgagtgccttcccccgcaac
atgaggcttccagacccattcacccctaatctgaaggtggatatgctgagtgagatcaac
attgctccccgcattcttaccaacttcactggtgttatgccttcccagtttaagaaggat
cttgactcgtacctaaagacccgctctcctgtcaccttcctttctgagctgcgcagcaac
ctgcaggtgtctaatgagccaggcaaccgctacaacatccagctgataaatgctctggtg
ctgtacgtgggcacccaggccattgctcacatccacaacaagggtagcactccctccatg
agcaccatcactcactcagcacacatggacatcttccagaaccttgcagtcgacctggac
actgaaggccgctatctgttcctgaatgcgatagccaatcagctgcgttacccaaacagc
cacacgcactactttagctgtaccatgctttatctgtttgccgaggccaatgctgaagcc
attcaagagcagatcacaagggtactgctggagaggctgattgtgaacaggccgcaccca
tggggtctgctcataacctttattgagctgatcaagaaccctgcctttaagttctggagc
catgactttgtgcactgtgccccagaaatcgagaagttgttccagtcagtggcgcagtgc
tgcatggggcaaaagcaggcccagcaggtgatggagggaacaggtgccagttag
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integrated database retrieval system
