Myxocyprinus asiaticus (Chinese sucker): 127447649
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Entry
127447649 CDS
T08782
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
masi04040
]
127447649
Ion channels [BR:
masi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127447649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127447649
NCBI-ProteinID:
XP_051565573
LinkDB
All DBs
Position
10:complement(47493598..47567245)
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AA seq
1837 aa
AA seq
DB search
MAQMFTPPGPKSLRLFTRESLKAIESRIAEENANKSKEKGERDKDDGSGTKPNSGLEAGK
KLPFIYGDPPRKLLSTPLEDLDKFYSKQTTFIVVNKQKTITRFNASPALYIFSPFNPLRR
ISIKILVHSLFSMIIMLTILANCVFMTDAQPPDSAKNVEYTFTGIYTFEALIKITARGFC
VGQFTFLRDPWNWLDFIVIVMAYVTEFVELGNVSALRAFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTLFCLSVFALVGLQLFMGSLRHKCVWQPANSTLDENKDLYLNWTSA
CNGTNKDFCQKYINNPGHTHTRPGCLKALICGKSSDAGHCPDGFICMKVGSNPDYGYTSF
DSFGWAFLSLFRLMTQDYWENLYQQTLRAAGKSYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATSEEALKKEEEFSIMIEQLMRQEEEEQASASKCDELSGGITDSSSDASKFSSK
SAKERRNRRKKRQRQGEDEKKEDSSLRKNSFRNNRRSYERTCTSPNQSPLSFQGSLLTPR
RNSKASIFSFRGRLLSENNYADDEQSMCEETGSRKDSPFVPCHTERLYSRVSRGSLTPRI
LLPSNRKVRYVVDSNSVVMVATDTDEEFRERCDSQRFSVAFLHNQSARQRALSVVSVSNN
PTDWSDVWKQKCIECWYDFAENYLIWECCPAWLRIKKIVHMIVMDPFADLFITICIVINT
VFMAMEYQPMEDSFSKMLLIANVVFIGIFTAEMILKIIALDPYNYFQEGWNIFDSIIVTL
SLLELCLTNVLSGMGFLRPCRLLRVFKLAKSWPTLNMLIKIIGNSLGALSNLTLVLAIIV
FIFAVVGMQLFGKSYRDCVCKISDDCTLPRWHMIDFFHSFLIVFRVLCGEWIETMWDCMQ
VAEQPMCLIVFLMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDEGEKNNLQIAVGRIKK
GFAFVKACLQSFFQSSGLRHKKKNKTRDGNMQSMNSYEIKDNSNQTALELFKDPGGMAGV
DREGENFISNPSLTISVPIAVEESDFDCLKREDFCSLSSDLDEDKEKLTDVDPISSEGST
VDLRHFGHNKDGEDTVDFEIEESTEPEACFTPGCVQKFPCCQVNDEKGFWRTWWILRRVC
FNIVEHNWFETFIIFMILLSSGALAFEDIYLDTRKNIKTILEYADKIFTCIFILEMLLKW
VAYGFAKYFTNLWCWLDFVIVDVVVNALLGAIPSILNVLLVCLIFWLIFSIVGVNFFAGK
FFECVNVTTDQRLPFTEVNNMSQCKSFDNNATHWKHLKINFDNVGNGYLALLQVATFKGW
MPIMYAAVDSRNINDQPIYEVNKYMYIFFIVFIILGAFFTLNLFIGVIIDNFNQQKKKFG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNKIQGFIFDVVTNQAFDIFIMVLIWLN
MVAMMVETDYQTKEMEVVLYWINLMFIVIFTSECLLKMFALRHYFFTNGWNVFDFVVVIM
SIVGMSLSKVIGKYFVSPTLFRVIRLVRIGRILRLIKGAKGIRTLLFALIMSLPALFNIG
LLLFLVMFIYAIFGMSSFAYVKKSGGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPML
NTEYPYCNTTKSKSDCGNPPIGISFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPL
SEDDFDRFYEVWEKFDPKATQFVEYSKLSDFADSLDPPLRIPKPNRLQLISMDLPMVSGE
RIHCLDILFAFTKRVLGEGGEMDVLHGQMEERFMASNPSKVSYEPITSTLRRKHEDMSAA
VIQRAFRTHRIKHSKFNNKYRETKQQNGKVLKKRLDG
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatgtttactccaccaggaccaaaaagtctccgtcttttcacccgtgaatct
cttaaggccatcgagagccggatcgcggaggagaacgccaataagtcaaaggagaaaggg
gagagggataaagatgatggaagtggaacgaaacccaacagcggcctggaggccgggaaa
aaactgccatttatatatggagaccctcccagaaaactactgtccacaccactggaagac
ctggacaagttctacagcaaacagacaacttttatagtagtgaacaaacagaagacaatc
acgcgcttcaatgcctctcctgccttgtacattttcagtcccttcaaccctctgaggaga
atatcaatcaagattttggtgcattcattgttcagcatgattattatgttaaccatactg
gccaactgtgttttcatgaccgacgcacaaccaccggactcggccaagaatgtcgagtac
acattcactgggatatacacctttgaagcgcttataaagattacggctaggggattctgt
gtgggtcagtttacattcctcagggacccgtggaactggttggattttattgttattgta
atggcatatgtaacagagtttgtggaactgggtaatgtgtccgcccttagagcgttcaga
gttttgcgagccctcaaaaccatatcagtcattccagggctgaagacgatcgttggggct
ctgatccagtcggtgaagaagctggctgatgtgatgatattgaccctgttttgcctaagc
gtctttgctttggtcgggttgcagctctttatgggtagtttaagacataaatgtgtgtgg
cagcctgccaactccacccttgatgagaacaaagacctgtatcttaactggacatctgcc
tgtaatggcacaaacaaagatttctgtcagaaatatattaataatcctgggcatactcac
actaggcccggttgccttaaggctctgatctgtgggaaaagcagtgatgcggggcattgt
ccagatggatttatctgcatgaaagtaggctccaatcctgattatggttacacaagcttt
gatagctttggctgggcctttctctccttattcagactgatgactcaggattactgggag
aatctttaccaacagactcttcgggcagcggggaagtcctacatgattttttttgtgctg
gtcatcttcctgggatctttctacctggtgaacctgatcctggcagtggttgctatggcg
tatgatgaacagaaccaagccacttctgaggaggctttgaagaaagaggaggagtttagc
atcatgattgagcagctcatgagacaagaagaggaagagcaggcctcagcatcaaagtgt
gatgagctcagcggaggtataacggacagctcttctgacgcctccaaattcagctccaaa
agtgctaaggaaaggcgcaaccgcaggaagaagagacagcgtcagggggaagatgagaaa
aaagaggattcaagccttagaaagaacagcttccgaaacaaccggcgctcatatgagagg
acatgcacatctccaaaccagtccccgctgagctttcagggttctctccttaccccccgt
cggaacagcaaagctagcatcttcagcttccgcggccgtttgctttccgaaaacaactac
gctgacgatgagcaaagcatgtgtgaggagacaggcagccgaaaagactcgccgtttgta
ccatgtcatactgaacgtctttacagcagggtaagcagaggcagcctgacaccacgcata
ctgctgccctctaacagaaaagtgcgctacgtggtcgacagcaacagtgtggtgatggtg
gcgactgatacagatgaagagttcagagaacgatgtgattcacaacgtttctcagtggct
tttctacacaaccagtcagcgagacagcgagctctgagtgtagtgagtgtcagcaacaac
cctactgactggtctgatgtttggaaacagaagtgtatagagtgctggtacgattttgcc
gagaattatctaatctgggaatgctgtcctgcgtggctgaggataaagaagattgtccac
atgattgtcatggacccgtttgctgatctgttcatcaccatttgcatcgtgataaacact
gtcttcatggccatggaatatcagcccatggaggattctttttccaaaatgcttttaatt
gccaatgtggttttcatcggaatatttacagcggaaatgattttaaagatcattgctttg
gacccgtataattattttcaggaaggctggaatatcttcgacagcatcatagtcactctt
agtctgctagagctttgtttgacaaacgtgttgtctggaatgggtttccttaggccatgc
cgattgctgagagtcttcaaactagctaagtcctggccgactttgaacatgctaatcaag
atcataggtaactcactgggggcattgagtaatctgacattggtactagccatcatcgtc
ttcatcttcgcggtggttggcatgcagctgtttggaaagagctaccgcgactgtgtgtgt
aagatttctgatgattgcactcttcctcgctggcacatgatcgatttcttccactcgttc
ctcattgtcttcagggtgttatgtggggagtggatcgagaccatgtgggattgtatgcaa
gtggcggaacagcccatgtgcttgatagtcttcctcatggtcatggtgattgggaatctg
gtggttctaaacctgttcctcgctctgctgctcagctcctttagcgctgacaaccttgcg
gtcaccgatgatgaaggcgagaagaacaacctacagatcgcagttggccgaatcaagaaa
ggctttgcctttgttaaggcctgtctgcaaagtttcttccaaagcagtggtttaagacac
aagaagaaaaataaaactagagatgggaacatgcaatcgatgaacagctatgaaataaaa
gacaactccaaccaaactgcattagagctgtttaaagaccctgggggaatggccggggtg
gatagagagggtgagaatttcatcagcaacccaagcctgaccatcagtgtcccaatcgct
gtagaagagtctgattttgactgccttaaaagggaggatttttgcagcctttcatctgac
ctagatgaagataaagagaagctgactgacgtggatccgatctcttctgagggcagtacg
gtggatctcagacactttggacataataaagatggagaagacacagtggactttgagata
gaggaatccacagagccagaagcctgtttcacaccagggtgtgtccagaagtttccatgc
tgccaagtgaatgatgagaagggcttttggagaacatggtggattctgagacgagtttgc
ttcaacatagtggagcacaactggtttgagaccttcatcatcttcatgattttacttagc
agtggcgctttggcattcgaggacatttaccttgacacaaggaaaaacataaagaccatt
ctggaatatgcagataaaattttcacttgcatctttattcttgaaatgctgctaaaatgg
gttgcatatggatttgccaaatacttcaccaatctctggtgctggctggattttgtaatt
gttgatgtggttgtgaacgctcttctaggtgccatcccctccatcttaaacgttctgctg
gtctgtctgatcttctggctgatttttagcattgtgggtgtcaacttctttgccggaaag
ttttttgaatgtgtaaatgttaccacagatcagcgtctgcctttcacagaggtcaataat
atgtcacagtgtaaatcatttgacaataatgcaactcactggaaacatctgaagattaac
tttgacaacgttggaaacggatacctggccttgttacaagtggccacctttaaaggctgg
atgcccataatgtatgcggcagtagactctcgcaatataaacgatcagccaatctacgag
gtgaataagtatatgtacatctttttcatcgtctttatcatccttggagcttttttcaca
ttaaacctcttcattggagtcatcattgacaacttcaatcagcaaaagaaaaaatttgga
ggtcaggatattttcatgacagaagagcagaagaaatactacaatgctatgaagaagctt
ggatcaaagaaacctcaaaaacctattccaaggccaactaacaagattcaaggattcatc
tttgatgtcgtaaccaaccaggcctttgatattttcattatggtactgatatggctcaat
atggtggctatgatggtggaaactgattatcagaccaaagaaatggaggtcgtactgtac
tggatcaatttaatgttcattgtgatcttcaccagcgaatgtttgctgaaaatgttcgcg
ctacgacattacttctttaccaatggctggaatgtatttgattttgtcgttgtcattatg
tctatagttggcatgtctctgtcaaaagtcattgggaaatactttgtctcacccaccttg
tttcgggtaattcgccttgtcaggattggccgcatactacgtcttatcaaaggcgccaag
ggaatacggacccttctctttgctttgataatgtcacttccagccctcttcaacattgga
cttctgcttttcctcgttatgttcatctacgccatctttggcatgtcaagctttgcctat
gttaagaaatcgggaggcattgatgacatgttcaactttgagacatttggcaacagcatg
ttgtgtttgttccagatcactacctcggcgggttgggacggcctcctggcaccaatgctc
aatactgaatatccttattgtaacacaacaaagagcaaaagtgactgtggcaacccacct
attggcatctccttttttgtcagctatatcattatatgtttcctgatcgtggtgaacatg
tacatcgctgtgatattggagaacttcagtgtggccactgaagagagtgcagaaccttta
agcgaagacgacttcgacaggttttacgaggtttgggaaaagtttgatcctaaagccacc
cagtttgtggaatacagcaagttgtctgactttgcagattctctggatcctccattgcgt
atacccaaacccaacagactccagctgatctccatggatttgccgatggtgagtggtgaa
cgaattcactgtctggatattttgtttgcattcaccaaacgtgttctcggggaaggcggt
gagatggatgtccttcacggacaaatggaagaacgattcatggcttccaacccctccaag
gtctcctatgagcccatcacctcaaccctacgcagaaagcatgaagacatgtcggccgcc
gtaatccagagagcctttaggacgcacaggattaagcatagtaagttcaataataagtac
cgagagacaaaacaacaaaacgggaaggtcctaaaaaaaagactcgatggttaa
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