Massilia sp. WG5: AM586_05200
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Entry
AM586_05200 CDS
T04122
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
masw
Massilia sp. WG5
Pathway
masw03420
Nucleotide excision repair
masw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AM586_05200
03430 Mismatch repair
AM586_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_05200
Enzymes [BR:
masw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AM586_05200
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM586_05200
MMR (mismatch excision repair)
Other MMR factors
AM586_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALK95765
LinkDB
All DBs
Position
4341341..4343659
Genome browser
AA seq
772 aa
AA seq
DB search
MNLLDNLNPEQLAAVTLPSQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPAGLMAVTFT
NKAAKEMLTRLSSMLPVNTRGMWIGTFHGLCNRLLRTHHRDAALPQTFQILDSQDQLSMI
KRMLKALNVDDDKYPAKDLMYFINNAKDNGLRASQVEAYDHIQRRMVELYDAYDQQCQRE
GVVDFAELLLRAYELLQRNHPLRQHYQMRFRHILVDEFQDTNDLQYNLLKLLAGHHEPGG
GAIFAVGDDDQSIYAFRGANVGNMQAFEREFEVKNLIKLEQNYRSHGHILDSANYLIANN
TKRLGKNLRTDAGQGELVRVYEASSDLEEAQWIIEEAKSLMAEGMPRSEIAILYRSNAQS
RVIEHALFAAGLPYTVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFMRVVNFPTRGIGA
RSIEQLQMAADSYGVSLYAAVPYMTGKAGSALGNFVKLIESARFETQQLPLPEMVKVVLE
RSTLLSHYEKEKEGAERIENLQQMVSAATHFVQEEGFGIQAPAHLGPQALPSSGDAIVNA
DGVEVLDADAPLAAVMSPLSAFLAHASLEAGDAQAQAGQDAMQLMTVHSAKGLEFDAVFI
TGLEEGLFPHESSSRELDGVDEERRLMYVAITRARKRLYMSFTQQRMLHGQTRFNMKSRF
FDELPEESLKWLSPRVQTNWFSNRKSTTAWDDASFREGGSDNQIAKQITQKSSSDKGIGW
RIGEAVSHSRFGEGVIVNIEGGAGSPRALINFGGAGMKMLDLSVAKLEKMAR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacaatctgaatcccgaacagctcgccgccgtcacgctgccgtcccag
agcgccctgatcctggccggcgccggctcgggcaagacccgcgtgctgacgacccggatc
gcctggctgatccagacgggccaggtctcgccggccggcctgatggccgtgaccttcacg
aacaaggcggcgaaggaaatgctgacccgcttatcgagcatgctgccggtgaacacgcgc
ggcatgtggatcggcaccttccacggcctgtgtaaccgcctgctgcgcacccaccaccgc
gacgccgcgttgccgcagaccttccagatcctcgattcgcaggaccagctgtcgatgatc
aagcgcatgctgaaggccctgaatgtcgacgatgacaagtacccggcgaaagacctgatg
tacttcatcaacaacgccaaggacaacggcctgcgcgccagccaggtcgaggcctacgac
catatccagcgccgcatggtcgagctgtacgacgcctacgaccagcagtgccagcgcgag
ggcgtggtcgatttcgccgagctgctgctgcgcgcctatgaactgctgcagcgtaaccac
ccgctgcgccagcattaccagatgcgcttccgccacatcctggtcgacgagttccaggat
accaacgacctgcagtacaacctgctgaaactgctggcggggcatcacgagccgggcggc
ggcgcgatcttcgcggtcggcgacgacgaccagagcatctacgccttccgcggcgccaac
gtcggcaacatgcaggccttcgagcgcgagttcgaggtgaagaacctgatcaagctggag
cagaactaccgctcgcacggccatatcctcgacagcgcgaactacctgatcgcgaataac
accaagcgcctcggcaagaacctgcgcaccgatgcggggcagggcgagctggtgcgcgtc
tacgaagcatcgagcgacctcgaagaagcgcagtggatcatcgaggaagccaagagcctg
atggccgagggcatgccgcgcagcgaaatcgcgatcctgtaccgctcgaacgcccagagc
cgcgtgatcgagcacgcgctgttcgcggccggcctgccctatacggtgtacggcggcctg
cgctacttccagcgcgccgaggtcaagcacgcgatcgcctacctgcagctgatggacaac
ccgcacaacgattcggccttcatgcgcgtggtgaacttcccgacccgcggcatcggcgcg
cgctcgatcgagcagttgcagatggcggccgacagctatggcgtgtcgctgtacgcggcg
gtgccctacatgaccggcaaggccggcagcgcgctgggcaatttcgtcaagctgatcgag
agcgcgcgcttcgagacccagcagctgccgctgccggaaatggtcaaggtggtgctggag
cgcagtacgctgctgagccactacgagaaggaaaaggaaggcgccgagcgcatcgagaac
ttgcagcagatggtgagcgccgccacccacttcgtgcaggaagagggcttcggcatccag
gcgccggcccacctgggcccgcaggcgctgccgagcagcggcgacgcgatcgtcaacgcc
gacggcgtcgaggtgctggatgcggacgcgccgctggcggccgtgatgtcgccgctgtcg
gccttcctggcgcacgcctcgctggaggccggcgacgcccaggcccaggccggccaggac
gcgatgcagctgatgacggtgcactcggccaagggcctggaattcgacgccgtcttcatc
accggcctcgaagaaggcctgttcccgcacgagagcagttcgcgcgagctggacggcgtg
gacgaggaacggcgcctgatgtacgtggcgatcacgcgcgcgcgcaagcgcctgtacatg
agctttacccagcagcgcatgctgcacggccagacccgcttcaacatgaagtcgcgcttc
ttcgacgaactgccggaggaatcgctgaaatggctgtcgccgcgcgtgcagaccaactgg
ttcagcaaccgcaagtcgaccacggcctgggacgacgccagcttccgcgagggcggcagc
gacaaccagatcgccaagcagatcacccagaagtccagcagtgacaagggcatcggctgg
cgcatcggcgaggcggtgtcgcattcgcgcttcggcgagggcgtgatcgtcaacatcgag
ggcggggccggcagtccgcgcgccctgatcaacttcggcggggccggcatgaagatgctc
gacctgtcggtggccaagctggagaagatggcgcgctga
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