Massilia sp. WG5: AM586_20460
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Entry
AM586_20460 CDS
T04122
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
masw
Massilia sp. WG5
Pathway
masw02024
Quorum sensing
masw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM586_20460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AM586_20460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masw03019
]
AM586_20460
03036 Chromosome and associated proteins [BR:
masw03036
]
AM586_20460
Messenger RNA biogenesis [BR:
masw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AM586_20460
Chromosome and associated proteins [BR:
masw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AM586_20460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SRP14
Motif
Other DBs
NCBI-ProteinID:
ALK98202
LinkDB
All DBs
Position
complement(1748321..1748557)
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AA seq
78 aa
AA seq
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MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGHIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNLNLEQDAE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaactgttacaagacccattcctcaatgccttgcgcaaggaacat
gtcccggtctctatctacctggtcaacgggatcaagctccagggacatatcgaatccttc
gatcagtacgtggttctgctccgtaacaccgtcacccagatggtctacaagcacgccatt
tccaccgtcgtcccggcacgtgccgtcaacctcaacctcgaacaagacgccgagtga
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