Massilia sp. YMA4: DPH57_16205
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Entry
DPH57_16205 CDS
T05528
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00521
Streptomycin biosynthesis
masy00523
Polyketide sugar unit biosynthesis
masy00525
Acarbose and validamycin biosynthesis
masy00541
O-Antigen nucleotide sugar biosynthesis
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01250
Biosynthesis of nucleotide sugars
Module
masy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DPH57_16205 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DPH57_16205 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DPH57_16205 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DPH57_16205 (rfbB)
00525 Acarbose and validamycin biosynthesis
DPH57_16205 (rfbB)
Enzymes [BR:
masy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DPH57_16205 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AXA92552
UniProt:
A0A7U6B6H4
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All DBs
Position
complement(3798093..3799166)
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AA seq
357 aa
AA seq
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MIFVTGGAGFIGSNFVLDWLAQSDEPVLNFDKLTYAGNVNNLASLKDDPRHVFVRGDICD
GEQVLALLREHQPRAIVHFAAESHVDRSIHGPAEFINTNINGTFALLEAARAYWTALEGD
AKAAFRFLHVSTDEVYGTLGPNDPPFSETTPYAPNSPYSASKAASDHLVRSYHHTYGFPT
LTTNCSNNYGPYHFPEKLIPLIIANAQAGKPLPIYGDGQQIRDWLFVSDHCTAIRRVLAD
GKLGETYNVGGWNEMANLDVVHTLCDILDSLKPKAGGGSYRDQITYVKDRPGHDRRYAID
ARKLERELGWKPAETFETGIRKTVQWYLDNPEWVADVQSGAYAKWVETNYFNREAGQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgtgacaggtggggccggcttcatcggctcgaacttcgtgctggactggctg
gcccaatcggatgagcccgtcttgaattttgacaagttgacctatgcgggtaatgtcaac
aacctggcctcgctgaaggacgatccgcgccacgtgttcgtgcgcggcgacatctgcgac
ggcgaacaggtgctggcgctgctgcgcgagcatcagccgcgcgccatcgtgcacttcgcg
gccgagagccacgtcgaccgttcgatccacggtccggccgaattcatcaacaccaatatc
aatggcacgttcgcgctgctggaagcggcgcgcgcctactggacggcgctggaaggcgac
gccaaggcggccttccgcttcctgcatgtttccaccgacgaggtgtacggcaccctgggc
ccgaacgatccgccgttctccgaaacgacgccgtatgcacccaacagcccttactcggcc
tcgaaagccgcgtcggaccacctggtgcgctcgtaccaccatacctatggcttcccgacg
ctgacgacgaactgctccaacaactacggcccgtaccacttcccggaaaaactgatcccc
ctgatcatcgccaacgcgcaggccggcaagccgctgccgatctatggcgacggccagcag
atccgcgactggctgttcgtcagcgaccattgcacggcgatccgccgcgtgctggccgac
ggcaagctgggcgaaacctacaacgtgggcggctggaacgagatggccaacctggacgtc
gtgcacacgctgtgcgacatcctggacagcctgaaaccgaaggctggcggcggcagctac
cgcgaccagatcacctacgtcaaagaccgccccggccacgaccgtcgctacgccatcgac
gcgcgcaagctggagcgcgaactgggctggaagccggccgagacgttcgagacgggcatc
cgcaagacggtgcagtggtacctggacaatccggaatgggtggccgacgtgcagtccggc
gcctatgccaaatgggtcgagaccaactacttcaatcgcgaggcgggccaatga
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