Pseudoduganella armeniaca: C9I28_27650
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Entry
C9I28_27650 CDS
T05378
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masz03016
]
C9I28_27650
Transfer RNA biogenesis [BR:
masz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
C9I28_27650
Prokaryotic type
Methyltransferases
C9I28_27650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
MCM
Ras
Roc
Arf
MMR_HSR1_Xtn
AAA_16
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVR98977
UniProt:
A0A2R4CH40
LinkDB
All DBs
Position
complement(6333162..6334538)
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AA seq
458 aa
AA seq
DB search
MNLDTSPIAAIATAPGRGGIGVVRASGKNLQGLAQALFGAPLKPRHATYIPFTQADGNLI
DQGIALYFKGPHSYTGEDVIELQGHGGPVVLQMLLQRVLEAGREFGVRLAEPGEFTRRAY
MNDKLDLAQAEAVADLIDASTEAAVKSASQSLSGAFSKTIHALVERVTHLRMLVEATLDF
PEEEIDFLEKSDARGQLKGIVEALDAVFRQASQGALLREGLNVVLVGQPNVGKSSLLNAL
AGADVAIVTPIAGTTRDKVTETIQIEGIPLNIIDTAGIRGIEEAVDVVERIGIERTWGEV
GKADVILHMLDASHGPTRADEAIIAGFPAGVPVLRIWNKIDLSGHKPSLDTSEDATHIYL
SAHEHQGIDLLRQELLRIAGWQQTGESLYLARERHLIALKNAARHLDHASQHAAQTDQSL
DLFAEELRLAQTQLSTITGAFSSDDLLGVIFSRFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgatacctctcccatcgccgccatcgccaccgcgccggggcgcggcggcatc
ggcgtcgtgcgcgcctccggcaagaacctgcagggactggcgcaggcgctgttcggcgcg
ccgctgaaaccgcgtcatgccacctacattccgttcacgcaggcggacggcaacctgatc
gaccagggcatcgccctctatttcaagggcccccattcgtacacgggcgaggacgtgatc
gagctgcagggccacggtggccccgtcgtgctgcagatgctgctgcaacgcgtgcttgag
gcgggccgcgagttcggcgttcgcctggccgagccaggcgaattcacccgccgcgcctac
atgaacgacaagctggacctggcccaggccgaggccgtggccgacctgatcgacgcgtcg
acggaagcggccgtgaaatcggcctcgcagtccttgtccggcgcattctcgaagacgatc
catgcgctggtcgaacgcgtgacgcacctgcgcatgctggtcgaggcgacgctggatttc
ccggaagaggaaatcgacttcctggaaaaatccgacgcgcgcggccagctgaaaggcatc
gtcgaggcgctggacgccgtgttccgccaggcgtcacaaggcgcgctgctgcgcgagggc
ctgaacgtggtgctggtggggcagccgaatgtcggtaagtcctcactactaaacgcgctg
gccggtgccgatgtcgccattgtcacgccgatcgccggcaccacgcgcgacaaggtcacg
gaaaccatccagatcgaaggcattccgctgaacatcatcgacacggccggcatccgcggc
attgaggaggcggtggacgtggtggagcgcatcggcatcgagcgcacctggggcgaagtg
ggcaaggcggacgtgatcctgcacatgctggacgccagccacggtccgacccgggcggac
gaagcgatcatcgccggcttcccggccggcgtgccggtgctgcgcatctggaacaagatc
gacctgtccggccacaagccgtcgctggacacgtccgaggacgccacccacatctacctg
tcggcgcacgagcaccagggcatcgacctgctgcgccaggagctgctgcgcatcgccggc
tggcagcagacgggcgaatcgctgtacctggcgcgcgaacgccacctgatcgcgctgaag
aatgcggcgcgccacctcgatcacgccagccagcatgcggcgcagacggaccagtcgctg
gacctgttcgccgaggaattgcgcctggcgcagacgcagctgtcgacgatcaccggcgcg
ttctcgtcggacgatctgctgggggtgattttcagccggttctgtatcggcaaataa
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