Metamycoplasma arthritidis: MARTH_orf213
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Entry
MARTH_orf213 CDS
T00724
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mat
Metamycoplasma arthritidis
Pathway
mat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MARTH_orf213 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mat03021
]
MARTH_orf213 (rpoC)
03400 DNA repair and recombination proteins [BR:
mat03400
]
MARTH_orf213 (rpoC)
Enzymes [BR:
mat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MARTH_orf213 (rpoC)
Transcription machinery [BR:
mat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MARTH_orf213 (rpoC)
DNA repair and recombination proteins [BR:
mat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MARTH_orf213 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4889
RnfC_N
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACF07129
UniProt:
B3PM77
LinkDB
All DBs
Position
200998..205392
Genome browser
AA seq
1464 aa
AA seq
DB search
MKKSRKYATLDSDKIAKISLALATPDDVESWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPICGHKYKKINEGSFCSKTELCKQEKVEILPKISRRNHMGHIKLNSPVVHFW
FFKVDHSIIFKLLDLTVAGRPNTEPVRRIDLENLIYYKSHIVLESGGIKALPKNLIIDIN
VAAVIYKDALEELITRFEPGTEDYEDIRETLDNLIEKASSKIGQDYGIDFYELNEVIEHY
SEAKIGTGAQAIEYLLKNLDLQKEKELVSAKIKKINDEEIMSGAKIASTSRQTREKLYKR
LQVINAFIESKQEPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLK
QWQEKDAPTLVIQNELRMIQEAVDALIDNARRSPNPVLSKDNRPFKSISDALTGKKGRFR
QNLLGKRVDYSGRSVIVVGPNLKMHQCGIPREMAAKLFEPWIIHRLIEKEVATTIKNAKK
MLEDQNPVIWPHIAEVIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIRLHPLVCTPFNA
DFDGDQMAVHVPISERALLESRELMLANKNILGTKDGEPIINPSQDMILGIYYLTIEEPG
ALGEGRIFDNYEHMIRAYEAKKVSLHARVALPIEEVKNSKIKAFASRESQRYIISTVGKF
IFNNIFPKSFPFIFDNKVTEATSLEQYSEKVNKYIIPAGTNVIEHIKMELPVLDAFNKKN
IAKIIRYVFDKYVAALTLQDVAGVIDQLNDVPLSNIVLNYLNLKTYDDRKVDQEHAIILA
ALTRSATEKTKARSQRHIEGLEVPLNAEEKAEILDDVWFRYTNMVASILDDIKDLGFKYS
SLSGITFAISDILETDKKPEYIAEGDAYIAQLKQYYNDGLISDDDRYSLTIKKWTDIKAK
VQGELQQIIKENPRNPIITMINSGARGNISNYVQLAGMRGLMANNTKSTRADVKNERVVR
STVEIPVKSSFIEGLTAFEFYSSTHGTRKGATDTALNTAKSGYLTRRLVDVAQNIVVRKE
NCGSDYGHIVRDIVDTKNGQIIVPLKERIIGRYANKPIIGEKTKQELAKRNTLITDKLAQ
KIIDEGVKEVEIRSVLGCNTKNGVCKMCFGKDLATNRVVNIGEAVGIIAAQSIGEPGTQL
TMRVFHTGGVAGAEDITGGFPRLIELIDAHEQPWGRPAVISPYEGEIVEDLVEDKNVNSH
LLTIKVVNSKKETVNKKVHVYTTKKLRVKVGDHVKVGQKLSEGPVIVKELLELTDTITVQ
NYLLKEIQKIYRIQGIAISDKYIEIIIRQMMSKIVIHDPGDSKFFAGAIVDIFDYQEENA
TLLSQRKRPAFGKVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRSDSLSGLKEN
IIVGKKIPAGTALYPFESHSKYDIRPSIDYFRKPELETSDSEFIPVDLESYHQELEDEQQ
QIIEVDDSDISVEDEENDFYENED
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcacgtaaatacgccactcttgacagtgacaaaattgctaaaatttcgctt
gccttagcaactcctgacgatgttgaatcatgatcacatggtgaagttacgaaaccggaa
actattaactacaaaagctataagcctgaacgtggcggtttgtttgatgaaattatcttt
ggtccaatgattgactatcgttgtccaatttgtggccataagtacaagaaaatcaacgaa
ggtagtttttgctctaagactgaactatgtaaacaagaaaaagttgaaattctaccaaaa
atctcacgtcgtaaccacatgggccacattaagctaaatagcccggtagtacatttttga
ttctttaaagtggatcactcaattatttttaaattgttagatctaactgtagcaggccgt
ccaaatacagagccagttagaagaatcgatcttgaaaacttaatttactacaaaagccac
attgttctagaatcaggcgggattaaagccttgcctaaaaacttaattattgacattaat
gttgctgctgttatttataaagacgctctagaagagttaatcactcgttttgagccaggg
actgaagattatgaagatattcgcgaaactcttgataacttaattgaaaaagcatcttca
aaaattggtcaagactatggaattgacttctatgaactaaacgaagtaatcgaacattac
tcagaggctaaaattggtactggcgctcaagcaattgagtacttgctaaaaaatcttgat
cttcaaaaagaaaaagaacttgttagtgccaaaattaaaaagattaatgatgaagaaatt
atgagcggtgctaaaatcgcttcaacttcgcgccaaactagagaaaagttatataaacgt
cttcaagtaattaatgcttttattgaatcaaaacaagaaccaactagcatgttaatttat
aacttaccagttattcccgctgatcttcgtccactaattcaattagatggtggccgtcac
tcaacttctgatattaacgaactgtaccgccgggtaattattagaaataatcgtctaaaa
caatgacaagaaaaagacgctcctactttagttattcaaaatgaactaagaatgattcaa
gaagcagtcgatgctttaattgataatgctagaagatcgcctaatccagttctttcaaaa
gataatcgtccttttaaatcaatcagtgacgctttaactggtaaaaaaggtcgttttaga
caaaacttgctaggtaaacgggtagactactcgggacgttcagttattgtcgttggtcct
aatttaaaaatgcaccaatgtggtattccacgggaaatggccgccaaactttttgaacct
tgaatcattcaccgtttaattgaaaaagaagtggcaaccacaattaaaaatgctaagaaa
atgctagaagatcaaaatcctgttatttgaccacatatcgctgaggttattaaaggtaga
ttagttcttcttaaccgtgctcctactttgcatagactatcaattcaagcttttgaacct
gtcttagtaagaggaaaggctattcgcttgcacccacttgtatgtactccgtttaacgct
gacttcgatggtgaccaaatggctgttcacgtgccaatttctgaacgtgctttactagaa
agccgtgaattgatgcttgctaataaaaacattttgggaactaaagatggtgaaccaatt
atcaacccttcacaagatatgattttaggaatctactatctaacaattgaagaaccaggt
gctttaggagaaggaagaatttttgacaattacgagcatatgattcgtgcttatgaagct
aaaaaagtttcattacacgctagagtagccttaccaatcgaagaagttaaaaactcaaaa
attaaggcatttgcttcacgcgaaagtcaaagatatatcatctcaaccgtagggaaattc
attttcaacaatatcttcccaaaaagtttcccatttatttttgacaacaaagttaccgaa
gctacctcactagaacaatatagtgaaaaagttaataaatacattattccggcaggaacc
aatgtcattgaacacattaaaatggaattgcctgttcttgatgcttttaacaagaaaaac
attgctaaaattattcgttatgtttttgataaatatgttgcagctttaactcttcaagat
gttgctggtgttattgatcaattaaatgatgtgccactttcaaatattgtcttaaactat
ttgaacctaaaaacttatgatgatcgtaaagttgaccaagaacatgccattattctagcc
gctctaacaagaagtgctactgaaaaaactaaagctcgtagtcaaagacatattgaaggc
ttagaagtgccattaaatgctgaagaaaaagctgaaatcctagatgatgtttgatttaga
tacactaatatggttgcttctattctagatgatattaaagatcttggctttaaatactct
tcactttcaggaattacctttgctatttcagatattttagaaactgataaaaaaccagaa
tacattgctgaaggtgatgcttacattgcacaattaaaacaatactataacgacggacta
atctcagacgatgaccgttattcattaaccattaaaaaatgaactgatattaaagccaaa
gttcaaggtgagttacaacaaattattaaagaaaatcctcgtaacccaattattacgatg
attaactcgggggcaagaggtaatatctctaactatgttcaacttgctggtatgcggggc
ttgatggcaaacaacacaaagtccactcgtgctgacgttaaaaatgaacgggtagttaga
agtacggttgaaatcccagttaaatcttcatttatcgagggactaacggcttttgaattc
tattcatcaactcacggaacaagaaagggtgcaactgatacggcacttaacactgctaaa
tctggttatttaactagaagactagttgacgttgcacaaaatattgttgtacgtaaagaa
aactgtggttcagactatggccatattgttcgtgacattgtggacactaaaaatggtcaa
attattgttcctttaaaagaaagaattattggtcgttatgctaataaaccaatcattggc
gaaaaaaccaaacaagaacttgctaaacgaaacactctaattactgataaacttgcccaa
aaaattattgatgaaggcgttaaagaagttgagattcgttcagtcttaggctgcaacact
aaaaatggcgtatgtaagatgtgttttggaaaagacttggcaacaaatagggttgttaac
ataggagaagcagtcggaattattgccgctcaatcaattggtgaaccaggtacacaactt
accatgcgtgtcttccatactggtggggttgctggtgctgaggatattaccggtgggttc
ccacggctaattgaattaatcgatgcccatgaacaaccttgaggtcgtccagcggttatt
tcaccttatgaaggagaaattgttgaagatctagtagaagataaaaatgttaactcgcat
ttattaactattaaagtagttaactcgaaaaaagaaaccgttaacaaaaaagttcatgtt
tacacaactaagaaactaagggttaaagttggtgatcatgttaaagttggtcaaaaacta
tcagaaggaccagttattgtcaaagaacttctagaattaactgacactatcaccgttcaa
aactacttactaaaagaaattcaaaaaatctatcggattcaagggattgccatttcagat
aaatatatcgaaattatcattcgccaaatgatgtcaaaaatcgttattcatgatcccggt
gattcaaaattctttgccggagctattgttgacatctttgactatcaagaagaaaacgca
actttactatcacaacgtaaacgtcctgcatttgggaaagttgttattaaaggagcaaaa
caagtaccattactttctgattcattcttagcagctgcttcttatcaagaaacttctaaa
attttggttcatgcagcaatttcttcaagaagtgatagcttatcagggctaaaagaaaat
attattgttggtaagaaaattcctgctggaaccgcgctatatccttttgaatcacattca
aaatatgatattcgtccatcaattgattactttagaaaaccagaactagaaactagtgat
agtgaatttatcccagttgatttagaaagttatcaccaagaactagaagatgaacaacaa
caaattattgaagttgatgattcagatattagtgttgaagatgaagaaaatgacttctat
gagaatgaagattag
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integrated database retrieval system
