Mesocricetus auratus (golden hamster): 101843614
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Entry
101843614 CDS
T08306
Symbol
Cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101843614 (Cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101843614 (Cnot1)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101843614 (Cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101843614 (Cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
101843614
NCBI-ProteinID:
XP_040596728
UniProt:
A0ABM2X777
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEVFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPAETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVSG
LGTGSLTGIGTGGLGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVNTMVTTSTTTTVAKTVTVTKPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgtctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacacagtttctgattcaggagtgtgcctcg
ctgattacaaagccaaattttatctcgacattgtcctatgccattgataatccattacac
taccagaagagtttaaagcctgcaccccatttattcgcccagctgagtaaagttctcaag
ttaagtaaagtacaagaggtaatttttggtcttgcccttttgaattcttctagctcagat
ctcaggggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgctcttac
atagacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacatctcctactctcccatctcctatttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacactgcgcagagattttccccaagagcgttgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcttg
cctgattctggaggggtagctaaaaccatgatggagagctctctggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtgttgaagaatgtcgaaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcggact
cattcaggattaacggatggtattccattacagagcatctctgctcctggcagtggaatc
tggagtgatggaaaagataaaagtgagggcgcacaggcacacacatggaatgtagaggtt
ttgattgatgttcttaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ttggaccatcctggatttcaaattcgtgacagcaaaggacttcacaatgtggtttatggt
attcagaggggcctgggcatggaagtgtttccagtggattttatatataggccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaacccagaagtcttctgt
tttgctgactacccctgtcatactgttgccacggacattttgaaagcaccaccggaggat
gacaatcgagaaattgccacatggaaaagcttggatttgattgagtctctgctgaggctt
gctgaggttgggcagtatgagcaagtgaaacaactcttcagcttccctatcaaacactgt
cctgacatgttggtattggccttactacaaatcaacacctcctggcacaccttacgccat
gaactcatctctactttgatgccaattttccttggaaaccatcctaactctgccattatt
ttgcactatgcatggcatggacagggacagtcgccatcaattcgccaacttataatgcat
gcaatggcagaatggtacatgagaggagaacaatatgatcaggccaaattgtctcgaata
cttgacgtggcccaggacttgaaggccttgtcaatgctgctaaatggcactccatttgcc
tttgttattgaccttgctgcacttgcttcacggcgtgaatacctcaaacttgacaagtgg
ctaacagataaaataagagaacatggggagccttttatacaagcatgcatgactttttta
aagagaagatgcccttctattttgggtggacttgccccagagaaagatcagccgaagagt
gctcaacttcctgctgaaactctagcaacaatgttggcttgtctgcaggcttgtgcaggg
agtgtttctcaggagttatcagagaccatcctcaccatggtagccaactgcagtaatgta
atgaataaggccagacagccaccccctggagttatgccaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgatcctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggtttccctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacctctttcaacccca
aatcaaacaacggcattcagtggtattggaggactttcatcacaacttccagtaagtggt
cttggcacaggaagcctgactggtataggaactgggggccttggacttcctgcagtgaac
aacgacccttttgtacagaggaaactgggcacctctggactcaaccagcctacattccag
cagagtaagatgaaaccttctgacttgtctcaggtgtggccagaggccaatcagcacttc
agtaaagagatagatgatgaagcaaacagctatttccagcgaatatataatcacccacca
catccaaccatgtctgttgatgaggtactagaaatgctacagagatttaaagactctact
ataaaaagggagagagaagtttttaactgtatgctgaggaacttgtttgaagagtatcgt
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtggcata
attgaaaaaggactggtcacttacatggcattgggtctggccctgcgatatgttcttgaa
gctttacggaagccttttggatcgaaaatgtattattttggtattgctgcactagataga
tttaaaaatagattgaaggactatcctcagtattgtcagcacttggcttccattagtcac
tttatgcagtttccacaccatttgcaggagtacatcgagtatggacaacaatctcgagat
cctcctgtgaagatgcagggttctatcacgacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgcgggtcaggttaacacaatggta
accacctcaacaaccaccactgttgctaaaacagttacagtcaccaagccaacgggagtc
agctttaagaaagatgtgccaccttctataaatacaacaaatatagatacattgcttgtg
gccacagatcaaactgagagaattgtagagcccccagaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcaaatatgacccagaaggtggaagagcttaaagaa
accgtgaaggaagagtttatgccttgggtttcccagtatctagttatgaaaagagtcagt
attgagccaaactttcatagcctgtattcaaactttcttgacacattgaagaatccagaa
tttaacaagatggttctgaatgagacctacagaaacattaaagtgctgctgacctctgat
aaagctgcggccaatttctcagatcgttctttgctgaagaacttgggacattggctagga
atgattacattagctaaaaataaacccatcttgcacacggacttggatgtgaaatctttg
ctgctagaggcttacgttaaaggacaacaagagttgctttatgtagtgccctttgttgcc
aaagttctggagtctagtatccgtagtctggtttttagaccaccaaacccctggacgatg
gcaattatgaatgtattggctgaattgcaccaggagcatgacttaaagttaaacttgaag
tttgaaattgaggtgctctgtaagaaccttgcattagacatcaatgagctcaaacctgga
aacctgctgaaagataaggatcgcctgaagaacttagatgagcaactttctgctccaaag
aaagacgtcaaacagccagaggagctgcccgccatcacaacgacaacaacttctacaaca
ccagctaccagtactacgtgtacagccacagtcccgccacaaccacagtacagctaccac
gacatcaatgtctattctcttgcaggcctggcaccgcacatcactttaaatcccacaatc
cctttgttccaggctcatccacagttgaagcagtgtgtgcggcaagcaattgaacgggct
gtccaggagctagtccatcctgtggtagatcggtcaattaagattgccatgactacttgt
gaacagatagttagaaaggattttgccctggattctgaggaatctagaatgcgaatagca
gctcatcacatgatgcggaacttgacggctggaatggctatgattacttgcagggagcct
ttactgatgagtatatctaccaacctaaaaaacagttttgcctcagcccttcgtactgca
tccccacaacaaagggaaatgatggaccaagctgctgctcagttagctcaggacaattgt
gaattagcttgttgttttattcagaaaactgcagtggagaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgaggaagcatgctcggcaagaaggacgcagatac
tgtgaccctgtggtattaacgtatcaagcagaacggatgccagagcaaatcaggctgaag
gttggtggtgtggacccaaagcagctagccgtttatgaagagtttgcacgaaatgttcct
ggcttcttacctacaaatgacttaagtcagccaacgggatttttagctcagcccatgaag
caagcttgggcaacagacgatgtagctcagatttatgacaagtgtattacagaactggag
cagcacctacatgctattccaccaactttggccatgaatcctcaagcacaggctctccga
agtcttttggaggttgtagtgttgtctcggaattctcgagatgcgatagctgctcttgga
ttactgcaaaaggctgtagagggcttattagatgccacaagtggtgctgacgctgaccta
ttgctgcgatatagggaatgccacctcttggtactaaaagcgttgcaggatggcagggcg
tatgggtctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaa
tataaatataatgtggaggctgtggagttgttgattcgaaatcatttggttaacatgcag
caatatgatcttcatctagctcagtcaatggagaatggcttaaactacatggccgtggca
tttgctatgcagttggtaaaaattctgctggtagatgaaaggagtgttgcgcatattact
gaggcagacctatttcataccattgaaaccctcatgaggattaatgctcattccagaggc
aatgctccggaaggattgccccagctgatggaagtagtacgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gaatatgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctataccattcagcagcagctggccgtgacagtaccaaagcgttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccaacaaggaatacttaagactgatgac
ctcataacaaggttttttcgtctttgtactgaaatgtgtgtcgaaatcagttatcgtgct
caagcggagcagcagcacaatcctgctgccaatcccaccatgatacgagccaagtgctat
cacaacctggatgcctttgtccgactcattgcactgttagtgaagcactctggggaggcc
accaacacagtcaccaagatcaatctgctgaataaggttcttggtatagtagtgggagtt
ctcctgcaggatcatgatgttcgtcagagtgaatttcagcagcttccctaccataggatt
tttatcatgctgctgttggagctcaatgcacccgagcatgtgttggaaaccattaatttc
cagactcttacagctttctgcaatacattccacatcttaaggcctaccaaagctcctggc
tttgtatatgcctggcttgaattgatctcccatcggatctttattgcaagaatgctggcg
catacgccacagcagaaggggtggcctatgtatgcacagctgttgattgatttattcaaa
tatttagcgcctttccttagaaacgtggaactcactaaacctatgcaaatactctacaag
ggtactctaagagtgctgctagttcttttgcatgatttcccagagttcctttgtgattac
cattatgggttctgtgatgtgatccctcctaattgtatccagttaagaaatttgatcctg
agtgccttcccaagaaatatgaggctcccagacccattcactcctaatctgaaggtggac
atgttgagtgaaattaacattgcacctcggatcctcaccaatttcactggagtgatgcca
cctcagttcaaaaaagatttggattcctatcttaaaactcgatctcctgtcacttttctg
tcggatctgcgcagtaacctacaggtatctaatgagcctggcaatcgctacaacctccag
cttatcaatgcactggtgctctatgtagggactcaggccatcgcacacatccacaacaag
ggcagcacgccttcaatgagcaccatcacccactcagcgcacatggacatcttccagaac
ctggctgtggacttagacactgagggccggtatctcttcttaaatgcaattgcaaaccag
ctgcggtacccaaacagccacactcactacttcagctgcaccatgctgtacctttttgct
gaggcgaacactgaggcaatccaggaacagatcacaagggttctcttggaacggttgatt
gtaaataggccgcatccttggggtcttcttatcaccttcattgagctgattaaaaacccc
gcatttaagttctggaaccatgagtttgtacactgtgccccagagattgaaaagttattc
cagtctgttgcacagtgctgcatgggacagaagcaggcccagcaagtgatggaagggacc
ggtgccagttag
DBGET
integrated database retrieval system
