Mycolicibacterium aubagnense: MAUB_22450
Help
Entry
MAUB_22450 CDS
T07121
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
maub
Mycolicibacterium aubagnense
Pathway
maub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MAUB_22450 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maub03021
]
MAUB_22450 (rpoB)
03400 DNA repair and recombination proteins [BR:
maub03400
]
MAUB_22450 (rpoB)
Enzymes [BR:
maub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MAUB_22450 (rpoB)
Transcription machinery [BR:
maub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MAUB_22450 (rpoB)
DNA repair and recombination proteins [BR:
maub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MAUB_22450 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
BBX84372
UniProt:
A0ABM7ICI6
LinkDB
All DBs
Position
complement(2255891..2259283)
Genome browser
AA seq
1130 aa
AA seq
DB search
MLDVQTDSFEWLIGSDRWRAKAVDRGDINPVGGLEEVLAELSPIEDFAGTLSLSFSDPRF
DEVKAPVDECKEKDQTYAAPLFVTAEFINNTTGEIKSQTVFMGDFPMMTEKGTFIINGTE
RVVVSQLVRSPGVYFDESIDKATEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQ
PVTVLLKALGWTSEQIRERFGFSEIMMGTLEKDPTAGPDEALLDIYRKLRPGEPPTKESA
QTLLENLFFKEKRYDLARVGRYKVNKKLGLHDGNPAQVTATTLTEEDIVATIEYLVRLHD
GDTKMTAPGGVEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVE
AITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGL
EVRDVHSSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVTDQIDY
LTADEEDRHVVAQANSPLDDGGHFTEDKILVRRKGGEVEFVSANDVDYMDVSPRQMVSVA
TAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKSGVI
EEVSADYVTVMADDGSRHTYRMRKFNRSNHGTCANQRPIVDSGQRVEAGQVIADGPCTEN
GEMALGKNLLVAVMPWEGHNYEDAIILSQRLVEQDVLTSIHIEEHEIDARDTKLGAEEIT
RDIPNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAR
EVRDTSLKVPHGESGKVIGVRVFSREDDDDLPAGVNELVRVYVAQKRKISDGDKLAGRHG
NKGVIGKILPQEDMPFMPDGTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIEADA
NGAYPEWAANLPDGMHSAPRDSIVATPVFDGAREGELEGLLGSTLPNRDGDVMVDAEGKS
QLFDGRSGEPFPYPVTVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRF
GEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKEL
QSLCLNVEVLSSDGAAIEMRDSDDEDLERTAANLGINLSRNESASVEDLA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgttcagacggattccttcgaatggctgatcggttccgaccgctggcgggcg
aaggcagtggatcgcggcgacatcaaccccgtaggtggcctcgaagaggtcctcgcggag
ctgtcgcccatcgaggacttcgccggcaccctgtcgctgagcttctccgacccgcgcttc
gacgaggtcaaggctccggtcgacgagtgcaaggaaaaggaccagacgtacgcggccccg
ctgttcgtcacggctgagttcatcaacaacaccaccggcgagatcaagagccagacggtc
ttcatgggcgacttcccgatgatgaccgaaaagggcaccttcatcatcaacggcaccgag
cgcgtcgtcgtctcgcagctggtccgttcgccgggtgtgtacttcgacgagtccatcgac
aaggccaccgagaagaccctgcacagcgtcaaggtcatcccgggccgcggtgcttggctg
gagttcgacgtcgacaagcgcgacaccgtcggtgtccgcatcgaccgcaagcgtcgtcag
ccggtcaccgtgctgctgaaggcgctgggctggaccagcgagcagatccgcgagcgcttc
ggcttctccgagatcatgatgggcaccctcgagaaggacccgaccgccggtcccgacgag
gccctgctggacatctaccggaagctgcgcccgggcgagccgccgaccaaggagtcggcg
cagaccctgctggagaacctgttcttcaaggagaagcgttacgacctggcccgcgtgggc
cggtacaaggtcaacaagaagctgggcctgcacgacggcaatccggctcaggtgaccgcg
acgacgctgaccgaagaggacatcgtcgccaccatcgagtacctggtgcgcctgcacgac
ggtgacaccaagatgaccgcccccggcggcgtcgaggtccccgtcgaggtcgacgacatc
gaccacttcggcaaccgtcgtctgcgtaccgtgggcgagctgatccagaaccagatccgg
gtcggcctgtcgcggatggagcgcgtcgtgcgtgagcgcatgacgacccaggacgtcgag
gcgatcactccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggagttc
ttcggaaccagccagctgtcgcagttcatggaccagaacaacccactgtcgggtctgacc
cacaagcgtcgtctgtcggcgctgggccccggtggtctgtcccgtgagcgtgccggcctc
gaggtccgcgacgtccactcgtcgcactacggccgcatgtgccccatcgagacccctgaa
ggcccgaacatcggtctgatcggttcgctctcggtgtacgcgcgggtcaacccgttcggc
ttcatcgagaccccgtaccgcaaggtcgtcgacggtgtcgtcaccgaccagatcgactac
ctgaccgccgacgaggaggaccgccacgtcgtggcgcaggccaactcgccgctggacgac
ggtggccacttcaccgaggacaagatcctcgtccgtcgtaagggcggcgaggtcgagttc
gtctcggcgaacgacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcg
accgcgatgatcccgttcctggagcacgacgatgcgaaccgcgccctgatgggtgcgaac
atgcagcgtcaggcggttccgctggtgcgcagcgaggccccgctggtcggtaccggcatg
gagctgcgtgccgccatcgacgccggtgacgtcgtcgtggccgacaagtccggtgtgatc
gaagaggtttccgccgactacgtcaccgtcatggctgacgacggctcgcggcacacctac
cggatgcgcaagttcaaccgctcgaaccacggtacgtgcgccaaccagcgcccgatcgtg
gactcgggacagcgcgtcgaggccggccaggtcatcgccgacggtccctgcaccgagaac
ggtgaaatggccctcggcaagaacctgctcgtggcagtcatgccgtgggaaggccacaac
tacgaggacgccatcatcctgagccagcggctcgtggagcaggacgtgctcacctcgatc
cacatcgaggagcacgagatcgatgcgcgcgacaccaagctgggcgccgaggagatcacc
cgggacatcccgaacgtctccgacgaggtgctggctgacctcgacgagcgcggcatcgtc
cgcatcggcgccgaggtccgcgacggcgacatcctggtcggcaaggtcaccccgaagggt
gagaccgagctgaccccggaagagcgcctgctgcgtgccatcttcggtgagaaggcccgt
gaggtccgcgacacctcgctgaaggtgccgcacggtgagtccggcaaggtcatcggcgtc
cgcgtgttctcgcgcgaggacgacgacgatctgcccgccggtgtcaacgagctggtccgc
gtctacgtggcccagaagcgcaagatctccgacggtgacaagctcgccggccgccacggc
aacaagggcgtcatcggcaagatcctcccgcaggaggacatgccgttcatgcctgacggc
accccggtggacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggccag
attctggaaacccacctcgggtgggtggccaaggccggctggaacatcgaggcggatgcg
aacggtgcgtaccccgagtgggcggcgaacctgcccgacggtatgcacagcgcgccgcgc
gacagcatcgtcgccaccccggtgttcgacggtgcccgcgagggcgagttggagggcctg
ctgggctcgacgctgccgaaccgcgacggtgacgtcatggtcgatgccgaaggcaagtcg
cagctgttcgacggccgcagcggtgagccgttcccgtacccggtgacggttggctacatg
tacatcctgaagctgcaccacttggtcgacgacaagatccacgcgcgttcgaccggcccg
tactcgatgatcacccagcagccgctcggtggtaaggcgcagttcggtggccagcggttc
ggtgagatggagtgctgggccatgcaggcctacggtgcggcgtacacgctgcaggagctg
ctgaccatcaagtccgacgacaccgtcggtcgcgtgaaggtctacgaggcgatcgtcaag
ggcgagaacatccccgagccgggcatcccggagtcgttcaaggttctgctcaaggagctc
cagtcgctgtgcctcaacgtcgaggtgctgtcttcggacggcgccgcgatcgagatgcgc
gacagcgacgacgaggacctggaacgcaccgccgcgaacctgggtatcaacctgtcgcgc
aacgagtctgcttctgtcgaggatctcgcttaa
DBGET
integrated database retrieval system
