Mycobacterium avium 104: MAV_2963
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Entry
MAV_2963 CDS
T00433
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mav
Mycobacterium avium 104
Brite
KEGG Orthology (KO) [BR:
mav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mav03021
]
MAV_2963
Transcription machinery [BR:
mav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAV_2963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_3
HTH_Crp_2
HTH_23
MarR
HTH_24
DUF134
HTH_31
Sigma70_ECF
KORA
MarR_2
GerE
LacI
HTH_Tnp_4
DUF1492
HTH_7
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABK68118
UniProt:
A0A0H3A0X8
LinkDB
All DBs
Position
3000423..3001232
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AA seq
269 aa
AA seq
DB search
MTNAIAPTPTAARPTTQSDDSYEDVVEMFLELRRMPAESHEYRRQRERIVARCLPLADHV
ASHFARRGEGLDDLVQVARLGLMNAVNRFDPAKGPSFIGFAVPTMMGEVRRYFRDYSWGM
RVPRRLRELHVQISRTTADLAQQLGRAPNAGELSQVLEVPREEIVECLVAGDAYRLDSLD
APQGADSSGTPRSVADSVGDIDPQIEHITNREALRVLVATLPHREREVLRMRFFESMTQS
QIAERIGVSQMQVSRILANTLRCLRDQLE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcaatcgctccgacacctacagctgcccggcccaccacccaatccgacgat
tcgtacgaagacgtcgtcgagatgttcctggaactgcgccggatgcccgcggaatcgcac
gagtaccgccgtcagcgtgagcgcatcgtggcccgatgcctgcccctggccgatcacgtg
gccagccatttcgcccgccgcggcgagggtctcgacgacttggtccaggtcgcgcggctg
gggctgatgaacgccgtcaaccgcttcgatccggcgaagggtcccagcttcatcgggttc
gccgtgcccaccatgatgggcgaggtccgccgctatttccgcgactacagctgggggatg
cgggtgccccggcggctgcgcgagttgcacgtgcagatcagcaggacgaccgccgacctc
gcccagcagctcggccgggcgccgaacgccggcgagctctcgcaggtgctcgaggttccg
cgggaagagatcgtcgaatgcctggtcgccggcgacgcctatcgcctcgactcgttggat
gcgccgcagggtgcggacagttccgggacgccgcgctcggtggccgactcggtgggcgac
atcgacccgcagatcgagcacatcaccaaccgggaagcgctgcgggtcctggtcgccacc
ctgccgcaccgcgaacgcgaggtgttgcggatgcggttcttcgaatccatgacgcagagc
cagatagccgagcggatcggcgtctcgcagatgcaggtctcgcgcatcctggcaaacacc
ctgcgctgcctgcgcgaccaactcgagtaa
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