Aquirhabdus parva: HYN46_13320
Help
Entry
HYN46_13320 CDS
T05575
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mbah
Aquirhabdus parva
Pathway
mbah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYN46_13320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbah03400
]
HYN46_13320
Enzymes [BR:
mbah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HYN46_13320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYN46_13320
DNA repair and recombination proteins [BR:
mbah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYN46_13320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
MCR
Motif
Other DBs
NCBI-ProteinID:
AXI03726
UniProt:
A0A345P8W7
LinkDB
All DBs
Position
2967517..2968362
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETTKTSLKPLIGQRVTAIEVRQPSMRWPVPSDLGLLQGQTLVSLERRAKYILA
HFKHLQTDQAGNSLLLHLGMSGSLMLVPAEQLLRKHDHVLISFEHTQLRYHDPRRFGAVM
WLDQDSQSLLAKLAPEPLTDDFNADYLFDKLKNKNLAIKAAIMDNHLVVGVGNIYATEAL
FHTHIHPLRPAKSLSKDEVISLTSEIKRILTAAIALGGSTLRDYVNGMGENGYFQQTLDV
YGRAKQPCHQCHTLIETVKIGQRASSYCPKCQPLGTVASID
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccagaagtcgaaaccaccaagaccagccttaaaccgctgattggtcaa
cgcgtgactgcaattgaagtcaggcagcccagcatgcgctggcctgtgccgagtgatcta
ggccttctgcaaggtcaaacgctggtgagtctggagcgacgcgccaaatatatcttggcg
cattttaagcatctacagactgatcaagctgggaatagcttactactgcacctcggcatg
tctggcagtttgatgctggtacccgcagaacaactgctgcgcaagcatgaccatgtgctg
atcagctttgaacacacgcaactgcgctaccacgatccacgtcgctttggcgcagtgatg
tggctggatcaggactcacaatccctgttagcaaaattggcccccgaaccgctgaccgac
gacttcaatgcggactacctgttcgataaactgaaaaataagaatcttgcgatcaaagcc
gcgatcatggataaccatttggtggtgggtgtaggcaatatctacgcgaccgaagccttg
tttcacacccatatccaccccctgcggccagctaaaagcctatctaaagacgaagtaatc
tcactcaccagtgagattaaacgtattcttactgcagcgattgcattgggcggttcaacc
ttgcgtgactacgtcaatggcatgggcgaaaatggctactttcagcaaacgctggatgtc
tatggccgggcaaaacagccttgtcatcaatgtcatacactgatcgaaacagtcaaaatt
ggacagcgtgcgagtagctattgtccaaagtgtcaaccgcttggcacagtcgcctctatt
gattaa
DBGET
integrated database retrieval system
