Methanosarcina barkeri 3: MSBR3_3416
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Entry
MSBR3_3416 CDS
T04533
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSBR3_3416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbak03400
]
MSBR3_3416
DNA repair and recombination proteins [BR:
mbak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MSBR3_3416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH_2
AAA_21
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
AKB83994
UniProt:
A0A0E3WYJ3
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Position
complement(4484658..4486802)
Genome browser
AA seq
714 aa
AA seq
DB search
MISEQKISSLREIHGIGERVADRLTEHFGTEEAALQAICEGDIASLSEVNGISRNFALSL
SRYARSRAEGCSISDFLRTKEALDLYSRLLELIKSFAHTTHARDKLNLFYPLPASRMDLI
RERQAFIREYLELGNAFPENSEFLKLLTSVSELRPVSGNLRVRDRVILCGDSKIFEAARV
KFQDFLPVQAIENLSEFVDLARGYSSVIVFDDTYLGFDLPEGIEPEYLQDLSKTEFWQVL
PEKELAFFARNLNCIRSCLNIVSALRSGKFEIFEELSKEKLDVLETALSKLGEDGKPVEG
FDPELDRLGAALQNLDPALTSALNEANQRMNRTLEASSLTLRGQELVRLVSGGMEIKDLL
TKELNKIYKTETEAIKEELAKKLGLQKQEKLMLDSLFPDEISYPLYADQSQLQLLRQKLN
NSLEKTRLARKRELAKTLSGFHQPVEKLVRKVLDFDLGFSIACFSTKFRLNLPTLIPEAG
IGFIGGENLFLKARYGEIDPVSYSIGKTGFSPAGMENRVVLLSGVNSGGKTSLLELLSQC
VILGYMGFPVPAKKLELGPVEEFYYFGKSKGTLDAGAFETTLKQFSVLSEASEKLVLADE
LESITEPGASARIIAGILEYLYRNEQSLGVFVSHLSELILENTGTEVRVDGIEADGLDSH
LELIVNRNPVYNRIARSTPELIVERLFRKTTGKEQEFYSHLKDKFKTSSKATFK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagagcaaaaaatttcaagccttcgggaaattcatggaataggtgaaagggta
gccgataggctgactgagcactttggaactgaggaagccgctcttcaggctatttgcgag
ggtgatatagcttcgctttctgaggtcaatgggattagccgtaattttgctctttccctt
tccagatatgccagatccagagctgaaggctgctcaatttccgattttctcagaacaaaa
gaagctctagatctttattcccgcctgcttgagctgataaaaagttttgcccatacgacg
catgccagggacaaactaaaccttttttacccattacctgcttcgcgcatggatcttatc
cgagagagacaggctttcataagagagtatcttgaactgggaaatgccttccctgagaac
tccgaatttctaaaattgcttacgagcgtcagtgaactcaggccagtgtccgggaacctc
agagtcagggaccgggtaattttatgcggggattcaaaaatctttgaggcagccagagta
aagttccaggacttcctgcctgtccaggctatagaaaatctatcggaatttgtagatcta
gcaagaggttactccagtgtaattgtttttgatgacacttatctcggctttgatttacct
gaaggcattgaacctgaatacctccaggacctttccaaaactgaattctggcaggttctg
cctgaaaaagaactggcattttttgcgcggaacctgaactgcatccgttcatgcctgaat
attgtatcagctcttcgctcagggaagtttgagatttttgaagaactttcaaaagaaaag
cttgacgtactcgagaccgctctctcaaagcttggtgaagatggaaaacccgttgaaggt
tttgatcctgaacttgacaggctcggagcagcccttcaaaatctggatcctgcattgact
tcggctctgaatgaagctaaccagcgtatgaaccgaacccttgaggcaagttcccttact
cttagagggcaggaactcgtcaggcttgtaagcggcggaatggagattaaagacctgctt
acaaaggaacttaataaaatctataaaaccgaaactgaagcaatcaaagaagaacttgct
aaaaaactagggcttcaaaagcaagaaaaactaatgcttgactcactctttcctgatgaa
atctcctaccctctctacgcagatcaatctcagttgcagcttctcaggcaaaagttgaat
aatagccttgagaaaacacggcttgccagaaaaagagaactggcaaaaacgctttcaggt
tttcaccagcctgtagaaaaacttgtcaggaaagtcctggattttgacctgggtttttcg
attgcctgtttctctacaaaattccggcttaatctgcccacgttgattcctgaagctgga
ataggttttataggtggagaaaatctctttttaaaagcccgatatggagaaatcgatccc
gtcagttactccatcggaaaaaccggattttctccggcaggtatggaaaacagagttgta
cttttgagtggagtaaactcaggaggcaagacttccctgctcgaactcctttcccaatgc
gtaattcttgggtatatgggttttccggttcctgcaaaaaaacttgaactcgggcctgta
gaggaattctactatttcggaaaatcaaaaggaactctcgacgcaggagcttttgagact
acccttaagcaattctcagtgctctccgaagcctcagaaaaactggtacttgcggacgaa
ctggaatccatcactgagcctggagcttctgcacgaattatagcaggaattcttgaatat
ctatacagaaatgaacagagtcttggggtttttgtttcccatctttcagaactcatcctt
gaaaataccggaactgaagtaagagttgatgggattgaggcagatggtctcgattcccat
ctggaactaattgtaaaccggaatcctgtatacaaccgtattgctcgaagcactccagag
ctgattgtggaacggctgttcagaaagaccactggaaaagagcaggagttctactctcat
ttaaaagataaatttaaaaccagctcaaaagcaacttttaaataa
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