Mesomycoplasma bovoculi: MYB_02500
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Entry
MYB_02500 CDS
T03034
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbc
Mesomycoplasma bovoculi
Pathway
mbc03030
DNA replication
mbc03410
Base excision repair
mbc03420
Nucleotide excision repair
mbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYB_02500 (ligA)
03410 Base excision repair
MYB_02500 (ligA)
03420 Nucleotide excision repair
MYB_02500 (ligA)
03430 Mismatch repair
MYB_02500 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbc03032
]
MYB_02500 (ligA)
03400 DNA repair and recombination proteins [BR:
mbc03400
]
MYB_02500 (ligA)
Enzymes [BR:
mbc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MYB_02500 (ligA)
DNA replication proteins [BR:
mbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MYB_02500 (ligA)
DNA repair and recombination proteins [BR:
mbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MYB_02500 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYB_02500 (ligA)
MMR (mismatch excision repair)
DNA ligase
MYB_02500 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MYB_02500 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
Dna2
Motif
Other DBs
NCBI-ProteinID:
AHH45502
UniProt:
W5UTQ0
LinkDB
All DBs
Position
642976..645015
Genome browser
AA seq
679 aa
AA seq
DB search
MDKNEQIKKQILDLQKQIIKWNKEYFEDQNPSVDDLVYDKELKKLIDLENKYYFLFSLDE
LNNSPTKLVATSLNSQFKKVKHSKPMLSLDKAYDFSELEKWINKAQNILEKEAHCYVEPK
IDGLSIALLYKNGKLIQALTRGDGVSGEDITENATKILDKFIPKQIDYSKELEVRGEVFL
SKTGFEILKEQNPNITFANARNAASGILRRLSKTMSGKVKNQEDFLLLQCFIYTVVNPEK
HNLKTVSESFSFLKKLGFYTNNISKKAKNITQAFGFIKELSKQRHELDYNIDGVVLKIDD
FSIYEQLGQTSKFPHSAIAYKFEDQIVETELLDIFVTVGRTGKITYNAKLVPIQLNGTTV
SAAILPNYPFIEKLKICINSKVKVKKAGEIIPQIIGSVDEHLVTNFAKVTTCPKCKNLLQ
ESSTGIDQFCVNENCPAIVLKKLVHFCSKQAMNIATLAENRLNSLFETGLVKNSCDIFFL
EQKMQEMHSIFAKHKIKLQAKSVTKFLNEITNAKKTDFYRLIFALGIKNVGLTASKSLTQ
YANSLTELRNLDFSKLIDHYDFGPVIIESLQNFFINPKNQDFLNCLETINFEFSTPTKKS
EPAWASFSITGKLSKTRDEFIQIIEQAGAEFHSNPTKKTTYLLAGLDAGSKVEKAIKNNT
IVLDEESFWELISQKKLAK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaatgaacaaataaaaaaacaaattttggaccttcaaaagcaaattattaaa
tgaaataaagaatattttgaagaccaaaatccatctgttgatgacctagtttatgacaaa
gaattaaaaaaattaatagatcttgaaaataaatattactttttattttctttagatgaa
ctcaacaactcacctaccaaacttgttgcaacaagcttaaatagtcaatttaaaaaagta
aagcatagtaaacctatgctctcgcttgataaagcttatgatttttcagaacttgaaaaa
tgaatcaataaagctcaaaacattttggaaaaagaagctcattgctatgttgaaccaaaa
atcgatggactatccattgcccttttgtataaaaatggcaaacttattcaagcgctcact
cgtggtgatggagtgtcaggtgaagatattactgaaaatgcaactaaaattttagacaaa
tttattcccaaacaaatagactactcaaaagaacttgaagttcgtggtgaggttttttta
agcaaaactggttttgaaatcttaaaagaacaaaatccaaatataacatttgctaatgca
agaaatgcagcaagtgggattttacgtagattgagtaaaactatgtcaggtaaagtaaaa
aatcaagaagattttttacttttacaatgcttcatttacactgttgttaatcccgaaaaa
cacaatttaaaaacagtctccgaatctttttcatttttaaaaaagcttggtttttataca
aataatataagtaaaaaagctaaaaatatcacacaagcttttggatttattaaagaatta
agcaaacaaagacatgaactagactacaacattgatggagttgttttaaaaattgatgat
tttagcatttacgagcaactaggacagacttctaaatttccacatagtgcaattgcctat
aaatttgaagaccaaattgttgaaacagaactattagatatttttgtcactgttggacga
actggaaaaataacttacaatgctaaattagttcctattcaattaaatggtacaacagtc
agcgctgcaattttaccaaattatccttttattgaaaaacttaaaatatgtataaattca
aaggtaaaagtgaaaaaagcaggagaaattatcccgcaaattattggtagtgttgacgaa
catttagtcactaattttgctaaagttaccacttgcccaaaatgtaagaatttattacaa
gaaagctcaacgggtattgatcaattttgtgtgaatgaaaattgcccagctattgttttg
aaaaaattagttcatttttgttcaaaacaagcaatgaatattgctacacttgcagaaaat
agacttaattcactttttgaaactggattagtcaaaaatagttgtgatattttcttttta
gaacaaaaaatgcaagaaatgcatagcatttttgccaaacacaaaattaaattacaagcc
aaatctgtgactaaatttttaaacgaaattacaaatgcaaaaaaaactgatttttataga
ctgatttttgcacttggaattaaaaatgtaggtttaacagcttcaaaaagcttaactcaa
tatgctaattcactaactgagttgagaaatcttgattttagcaaacttatcgatcactat
gattttgggccagttattattgaatcattgcaaaacttttttataaatccaaaaaatcaa
gattttttgaattgccttgaaacaattaattttgaatttagtactcctacaaaaaaaagc
gagccagcttgagctagtttttcaattacaggtaaactttcaaaaactcgagatgagttt
atacaaattattgaacaagcaggagcagaatttcattctaatccaactaaaaaaacaact
tatctattagctggtttagatgctggttcgaaagttgaaaaagctataaaaaacaacaca
attgtattagatgaagaatctttttgggaattaatttcacaaaaaaaattggctaaataa
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